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Stefano D'Amelio

Bio: Stefano D'Amelio is an academic researcher from Sapienza University of Rome. The author has contributed to research in topics: Anisakis & Population. The author has an hindex of 35, co-authored 104 publications receiving 3725 citations. Previous affiliations of Stefano D'Amelio include Slovak Academy of Sciences & University of California, Davis.


Papers
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Journal ArticleDOI
TL;DR: The polymorphisms obtained by restriction fragment length polymorphisms have provided a new set of genetic markers for the accurate identification of sibling species and morphospecies.

297 citations

Journal ArticleDOI
TL;DR: A new distinct gene pool was detected, showing different alleles with respect to A. simplex sensu stricto and Anisakis pegreffii, widely extending the geographic ranges and the number of hosts of these 2 species.
Abstract: Isozyme analysis at 24 loci was carried out on anisakid nematodes of the Anisakis simplex complex, recovered from various intermediate/paratenic (squid, fish) and definitive (marine mammals) hosts from various parts of the world. A number of samples were found to belong to A. simplex sensu stricto and Anisakis pegreffii, widely extending the geographic ranges and the number of hosts of these 2 species. In addition, a new distinct gene pool was detected, showing different alleles with respect to A. simplex s. str and A. pegreffii at 5 diagnostic loci (99% level). Samples with this gene pool were assigned to a new species, provisionally labeled A. simplex C. Reproductive isolation between A. simplex C and the other 2 Anisakis species was directly assessed by the lack of hybrid and recombinant genotypes in mixed samples from sympatric areas, i.e., Pacific Canada for A. simplex C+A. simplex s. str., South Africa and New Zealand for A. simplex C+A. pegreffii, even when such samples were recovered from the same individual host. Similar levels of genetic divergence were observed among the three species (DNei from 0.36 to 0.45). At the intraspecific level, Canadian Pacific and Austral populations of A. simplex C were found to be genetically rather differentiated from one another (average DNei = 0.08), contrasting with the remarkable genetic homogeneity detected within both A. simplex s. str. and A. pegreffii (average DNei about 0.01). Accordingly, a lower amount of gene flow was estimated within A. simplex C (Nm = 1.6) than within the other 2 species (Nm = 5.4 and 17.7, respectively). Anisakis simplex C showed the highest average values of genetic variability with respect to both A. simplex s. str. and A. pegreffii, e.g., expected mean heterozygosity. Hr = 0.23, 0.16, and 0.11, respectively, in the 3 species. Data on geographic distribution and hosts of the 3 members so far detected in the A. simplex complex are given. Their ecological niche is markedly differentiated, with a low proportion of hosts shared. Intermediate and definitive hosts of A. simplex s. str. and A. pegreffii appear to belong to distinct food webs, benthodemersal, and pelagic, respectively; this would lead to different transmission pathways for the parasites.

251 citations

Journal ArticleDOI
TL;DR: Genetic variation of 1017 specimens of codworm, Pseudoterranova decipiens, collected from fish and seals at 23 sampling locations in the North Atlantic and Norwegian and Barents Seas, was analysed on the basis of 16 enzyme loci, indicating high levels of gene flow within each of the three species.

150 citations

Journal ArticleDOI
TL;DR: Phylogenetic analysis of LSU sequences revealed strong support for the monophyly of Anisakinae, Contracaecum plus Phocascaris, Pseudoterranova, and Anisakis, which is primarily consistent with previously published phenograms based on multilocus electrophoretic data.
Abstract: Individual specimens of Anisakis, Pseudoterranova, and Contracaecum collected from marine mammals inhabiting northern Pacific waters were used for comparative diagnostic and molecular phylogenetic analyses. Forty-eight new sequences were obtained for this study of 14 Anisakis taxa, 8 Pseudoterranova taxa, 4 Contracaecum taxa, and 4 outgroup species. Partial 28S (LSU) and complete internal transcribed spacer (ITS-1, 5.8S, ITS-2) ribosomal DNA was amplified by the polymerase chain reaction and sequenced. Sequences of ITS indicated that Pseudoterranova specimens from Zalophus californianus (California sea lion), Mirounga angustirostris (northern elephant seal), Phoca vitulina (harbor seal), Enhydra lutris (sea otter), and Eumetopias jubatus (Steller's sea lion) exactly matched P. decipiens s. str., extending the host and geographic range of this species. Anisakis from northern Pacific marine mammals were most closely related to members of the A. simplex species complex. Comparison of Anisakis ITS sequences diagnosed the presence of A. simplex C in 2 M. angustirostris hosts, which is a new host record. Anisakis specimens from Phocoena phocoena (harbor porpoise), Lissodelphis borealis (Pacific rightwhale porpoise), and E. jubatus included 3 ITS sequences that did not match any known species. Contracaecum adults obtained from Z. californianus were most closely related to C. ogmorhini s.l. and C. rudolphii, but ITS sequences of these Contracaecum specimens did not match C. ogmorhini s. str. or C. margolisi. These novel Anisakis and Contracaecum ITS sequences may represent previously uncharacterized species. Phylogenetic analysis of LSU sequences revealed strong support for the monophyly of Anisakinae, Contracaecum plus Phocascaris, Pseudoterranova, and Anisakis. Phylogenetic trees inferred from ITS sequences yielded robustly supported relationships for Pseudoterranova and Anisakis species that are primarily consistent with previously published phenograms based on multilocus electrophoretic data.

145 citations

Journal ArticleDOI
TL;DR: C. osculatum C was genetically the most distinct taxon with respect to all other members of the species complex, with interspecific differences ranging from 0.3% to 2.3%.
Abstract: The anisakid nematodes of seals from different geographical origins, previously identified as Contracaecum osculatum A, C. osculatum B, C. osculatum C, C. osculatum D, C. osculatulm E and C. osculatum baicalensis by multilocus enzyme electrophoresis, were characterised using a DNA approach. The first and second internal transcribed spacers (ITS-1, ITS-2) of ribosomal DNA (rDNA) were individually amplified by polymerase chain reaction (PCR) and analysed by single-strand conformation polymorphism (SSCP) and sequencing. SSCP analyses allowed the unequivocal differentiation of all taxa except C. osculatum D from C. osculatum E. While C. osculatum D and C. osculatum E had identical ITS sequences, each of the other four taxa had distinct sequences, with interspecific differences ranging from 0.3% to 2.3%. C. osculatum C was genetically the most distinct taxon with respect to all other members of the species complex.

140 citations


Cited by
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Journal ArticleDOI
TL;DR: Preface to the Princeton Landmarks in Biology Edition vii Preface xi Symbols used xiii 1.
Abstract: Preface to the Princeton Landmarks in Biology Edition vii Preface xi Symbols Used xiii 1. The Importance of Islands 3 2. Area and Number of Speicies 8 3. Further Explanations of the Area-Diversity Pattern 19 4. The Strategy of Colonization 68 5. Invasibility and the Variable Niche 94 6. Stepping Stones and Biotic Exchange 123 7. Evolutionary Changes Following Colonization 145 8. Prospect 181 Glossary 185 References 193 Index 201

14,171 citations

Journal Article
Fumio Tajima1
30 Oct 1989-Genomics
TL;DR: It is suggested that the natural selection against large insertion/deletion is so weak that a large amount of variation is maintained in a population.

11,521 citations

01 May 2005

2,648 citations

Journal ArticleDOI
TL;DR: This investigation revealed the presence of three species of Acanthocephala (Neoechinorhynchus pseudemydis, N. emyditoides, and N. chrysemydis) in Louisiana turtles and confirms Fisher’s (1960) work.
Abstract: Prior to the work of Cable and Hopp (J. Parasit. 40(6): 674.680, 1954) Neoechinorhynchus emydis (L e i d y, 1851) was the only recognized species of Acanthocephala in North American turtles. To date, a total of five species have been described. Of these, two species (Neoechinorbynchus pseudemydis Cable and Hopp, 1954, and N. emyditoides Fisher, 1960) were recovered from six of 12 Louisiana turtles (Pseudemys scripta elegans (Wied)) examined by Fisher (J. Parasit. 46(2): 257-266, 1960). He (1960) also found N. chrysemydis Cable and Hopp, 1954 in Pseudemys scripta subsp. The data pt .sented are results of studies conducted between the spring of 1965 and the summer of 1966. Seventynine turtles (48 female and 31 males) encompassing seven species (47 Pseudemys scripta elegans (Wied), three P. floridana hoyi (Holbrook), eight Chelydra serpentina serpentina (L.), eight Kinosternon subrubrum hippocrepis Gray, seven Terrapene carolina carolina (L.), five T. c. triunguis (Agassiz) and one Trionyx muticus (LeSueur) collected from Baton Rouge and vicinity were examined. This investigation revealed the presence of three species of Acanthocephala (Neoechinorhynchus pseudemydis, N. emyditoides, and N. chrysemydis) in Louisiana turtles and confirms Fisher’s (1960) work. Of the seven species of turtles examined, only P. s. e!egans (25 16 females and 9 males) and P. floridana hoyi (2 females) were positive with infection. Three of the 25 P. s. e!egans had mixed infection comprising three species of Neoechinorhynchus while seven had two species respectively. P. f!oridana hoyi represents a host record for N. chrysemydis;

790 citations