Sun-In Lee

Bio: Sun-In Lee is an academic researcher from Stanford University. The author has contributed to research in topics: Multinomial logistic regression & Logistic regression. The author has an hindex of 1, co-authored 1 publications receiving 370 citations.

EfficientL 1 regularized logistic regression

Abstract: L1 regularized logistic regression is now a workhorse of machine learning: it is widely used for many classification problems, particularly ones with many features. L1 regularized logistic regression requires solving a convex optimization problem. However, standard algorithms for solving convex optimization problems do not scale well enough to handle the large datasets encountered in many practical settings. In this paper, we propose an efficient algorithm for L1 regularized logistic regression. Our algorithm iteratively approximates the objective function by a quadratic approximation at the current point, while maintaining the L1 constraint. In each iteration, it uses the efficient LARS (Least Angle Regression) algorithm to solve the resulting L1 constrained quadratic optimization problem. Our theoretical results show that our algorithm is guaranteed to converge to the global optimum. Our experiments show that our algorithm significantly outperforms standard algorithms for solving convex optimization problems. Moreover, our algorithm outperforms four previously published algorithms that were specifically designed to solve the L1 regularized logistic regression problem.

"Why Should I Trust You?": Explaining the Predictions of Any Classifier

Abstract: Despite widespread adoption, machine learning models remain mostly black boxes. Understanding the reasons behind predictions is, however, quite important in assessing trust, which is fundamental if one plans to take action based on a prediction, or when choosing whether to deploy a new model. Such understanding also provides insights into the model, which can be used to transform an untrustworthy model or prediction into a trustworthy one. In this work, we propose LIME, a novel explanation technique that explains the predictions of any classifier in an interpretable and faithful manner, by learning an interpretable model locally varound the prediction. We also propose a method to explain models by presenting representative individual predictions and their explanations in a non-redundant way, framing the task as a submodular optimization problem. We demonstrate the flexibility of these methods by explaining different models for text (e.g. random forests) and image classification (e.g. neural networks). We show the utility of explanations via novel experiments, both simulated and with human subjects, on various scenarios that require trust: deciding if one should trust a prediction, choosing between models, improving an untrustworthy classifier, and identifying why a classifier should not be trusted.

Genome-wide association analysis by lasso penalized logistic regression

Abstract: Motivation: In ordinary regression, imposition of a lasso penalty makes continuous model selection straightforward. Lasso penalized regression is particularly advantageous when the number of predictors far exceeds the number of observations. Method: The present article evaluates the performance of lasso penalized logistic regression in case–control disease gene mapping with a large number of SNPs (single nucleotide polymorphisms) predictors. The strength of the lasso penalty can be tuned to select a predetermined number of the most relevant SNPs and other predictors. For a given value of the tuning constant, the penalized likelihood is quickly maximized by cyclic coordinate ascent. Once the most potent marginal predictors are identified, their two-way and higher order interactions can also be examined by lasso penalized logistic regression. Results: This strategy is tested on both simulated and real data. Our findings on coeliac disease replicate the previous SNP results and shed light on possible interactions among the SNPs. Availability: The software discussed is available in Mendel 9.0 at the UCLA Human Genetics web site. Contact: klange@ucla.edu Supplementary information: Supplementary data are available at Bioinformatics online.

Scalable training of L1-regularized log-linear models

Abstract: The L-BFGS limited-memory quasi-Newton method is the algorithm of choice for optimizing the parameters of large-scale log-linear models with L2 regularization, but it cannot be used for an L1-regularized loss due to its non-differentiability whenever some parameter is zero. Efficient algorithms have been proposed for this task, but they are impractical when the number of parameters is very large. We present an algorithm Orthant-Wise Limited-memory Quasi-Newton (OWL-QN), based on L-BFGS, that can efficiently optimize the L1-regularized log-likelihood of log-linear models with millions of parameters. In our experiments on a parse reranking task, our algorithm was several orders of magnitude faster than an alternative algorithm, and substantially faster than L-BFGS on the analogous L2-regularized problem. We also present a proof that OWL-QN is guaranteed to converge to a globally optimal parameter vector.

An Interior-Point Method for Large-Scale '1-Regularized Logistic Regression

Abstract: Logistic regression with ‘1 regularization has been proposed as a promising method for feature selection in classification problems. In this paper we describe an efficient interior-point method for solving large-scale ‘1-regularized logistic regression problems. Small problems with up to a thousand or so features and examples can be solved in seconds on a PC; medium sized problems, with tens of thousands of features and examples, can be solved in tens of seconds (assuming some sparsity in the data). A variation on the basic method, that uses a preconditioned conjugate gradient method to compute the search step, can solve very large problems, with a million features and examples (e.g., the 20 Newsgroups data set), in a few minutes, on a PC. Using warm-start techniques, a good approximation of the entire regularization path can be computed much more efficiently than by solving a family of problems independently.