Tamás Nepusz

TL;DR: Platform-independent and open source igraph aims to satisfy all the requirements of a graph package while possibly remaining easy to use in interactive mode as well.

TL;DR: ClusterONE-derived complexes for several yeast data sets showed better correspondence with reference complexes in the Munich Information Center for Protein Sequence catalog and complexes derived from the Saccharomyces Genome Database than the results of seven popular methods.

TL;DR: Whereas larger multiprotein assemblies tend to be more extensively annotated and evolutionarily conserved, human protein complexes with five or fewer subunits are far more likely to be functionally unannotated or restricted to vertebrates, suggesting more recent functional innovations.

TL;DR: A study of the controllability of network edge dynamics reveals that it differs from that of nodal dynamics, and that real-world networks are easier to control than their random counterparts.

TL;DR: An algorithm for determining the optimal membership degrees with respect to a given goal function is created, and a measure is introduced that is able to identify outlier vertices that do not belong to any of the communities, bridges that have significant membership in more than one single community, and regular Vertices that fundamentally restrict their interactions within their own community.