Timothy M. Shank

Bio: Timothy M. Shank is an academic researcher from Woods Hole Oceanographic Institution. The author has contributed to research in topics: Hydrothermal vent & Population. The author has an hindex of 47, co-authored 145 publications receiving 7789 citations. Previous affiliations of Timothy M. Shank include Massachusetts Institute of Technology & Rutgers University.

A Serpentinite-Hosted Ecosystem: The Lost City Hydrothermal Field

Abstract: The serpentinite-hosted Lost City hydrothermal field is a remarkable submarine ecosystem in which geological, chemical, and biological processes are intimately interlinked. Reactions between seawater and upper mantle peridotite produce methane- and hydrogen-rich fluids, with temperatures ranging from <40° to 90°C at pH 9 to 11, and carbonate chimneys 30 to 60 meters tall. A low diversity of microorganisms related to methane-cycling Archaea thrive in the warm porous interiors of the edifices. Macrofaunal communities show a degree of species diversity at least as high as that of black smoker vent sites along the Mid-Atlantic Ridge, but they lack the high biomasses of chemosynthetic organisms that are typical of volcanically driven systems.

The ecology of seamounts: structure, function, and human impacts.

Abstract: In this review of seamount ecology, we address a number of key scientific issues concerning the structure and function of benthic communities, human impacts, and seamount management and conservation. We consider whether community composition and diversity differ between seamounts and continental slopes, how important dispersal capabilities are in seamount connectivity, what environmental factors drive species composition and diversity, whether seamounts are centers of enhanced biological productivity, and whether they have unique trophic architecture. We discuss how vulnerable seamount communities are to fishing and mining, and how we can balance exploitation of resources and conservation of habitat. Despite considerable advances in recent years, there remain many questions about seamount ecosystems that need closer integration of molecular, oceanographic, and ecological research.

Temporal and spatial patterns of biological community development at nascent deep-sea hydrothermal vents (9°50 N, East Pacific Rise)

Abstract: The April 1991 discovery of newly formed hydrothermal vents in areas of recent volcanic eruption between 9°45′N and 9°52′N on the East Pacific Rise provided a unique opportunity to follow temporal changes in biological community structure from the “birth” of numerous deep-sea hydrothermal vents. In March l992, DSV Alvin was used to deploy an on-bottom observatory, the Biologic–Geologic Transect, to monitor faunal succession along a 1.37 km segment of the axial summit caldera between 9°49.61′N and 9°50.36′N (depth ∼2520 m). Photo- and videographic documentation of megafaunal colonization and chemical analyses of diffuse hydrothermal fluids associated with many of these developing communities within the Transect were performed in March 1992, December 1993, October 1994, and November 1995. Photographic and chemical time-series analyses revealed the following sequence of events in low-temperature venting areas. (1) Immediately following the 1991 eruption, hydrogen sulfide and iron concentrations in diffuse fluids were extremely high (>1 mmol kg-1) and microbially derived material blanketed active areas of venting in the form of thick microbial mats. (2) Mobile vent fauna (e.g. amphipods, copepods, octopods, and galatheid and brachyuran crabs) and non-vent fauna (e.g. nematocarcinid shrimp) proliferated in response to this increased biological production. (3) Within 1 yr of the eruption, areal coverage of microbial mat was reduced by ∼60% and individuals of the vestimentiferan tube worm Tevnia jerichonana settled gregariously in areas where diffuse flow was most intense. (4) Two years after the eruption, maximum levels of H2S decreased by almost half (from 1.90 to 0.97 mmol kg-1) and dense thickets of the vestimentiferan Riftia pachyptila dominated vent openings previously inhabited by Tevnia jerichonana. (5) Three years after the eruption, maximum hydrogen sulfide levels declined further to 0.88 mmol kg-1 and mussels (Bathymodiolus thermophilus) were observed on basaltic substrates. (6) Four years after the eruption, galatheid crabs and serpulid polychaetes increased in abundance and were observed close to active vent openings as maximum hydrogen levels decreased to 0.72 mmol kg-1. Also by this time mussels had colonized on to tubes of Riftia pachyptila. (7) Between 3 and 5 yr after the eruption, there was a 2- to 3-fold increase in the number of species in the faunal assemblages. In the absence of additional volcanic/tectonic disturbance, we predict that mytilid and vesicomyid bivalves will gradually replace vestimentiferans as the dominant megafauna 5–10 yr following the eruption. We also anticipate that the abundance of suspension feeders will decline during this period while the abundance of carnivores will increase. We hypothesize that the above series of events (1–7) represents a general sequence of biological successional changes that will occur at newly formed low-temperature deep-sea hydrothermal vents along the northern East Pacific Rise and contiguous ridge axes. Megafaunal colonization at deep-sea hydrothermal vents is considered to be the consequence of an intimate interaction of the life-history strategies of individual species, physical oceanographic processes, and the dynamic hydrothermal environment. Our observations indicate that the successful sequential colonization of dominant megafaunal vent species, from Tevnia jerichonana to Riftia pachyptila to Bathymodiolus thermophilus, also may be strongly influenced by temporal changes in geochemical conditions. Additional evidence demonstrating the close link between diffuse vent flux, fluid geochemistry, and faunal succession included the rapid death of several newly formed biological assemblages coincident with abrupt changes in the geochemical composition of the venting fluid and the local refocusing or cessation of vent flow. These correlations suggest that future models of faunal succession at hydrothermal vents along intermediate to fast-spreading mid-ocean ridges should consider not only the interplay of species-specific life-history strategies, community productivity, and physical oceanographic processes, but also the influence of changing geochemical conditions on the sequential colonization of megafaunal species.

Chemical speciation drives hydrothermal vent ecology.

Abstract: The physiology and biochemistry of many taxa inhabiting deep-sea hydrothermal vents have been elucidated; however, the physicochemical factors controlling the distribution of these organisms at a given vent site remain an enigma after 20 years of research. The chemical speciation of particular elements has been suggested as key to controlling biological community structure in these extreme aquatic environments. Implementation of electrochemical technology has allowed us to make in situ measurements of chemical speciation at vents located at the East Pacific Rise (9 degrees 50' N) and on a scale relevant to the biology. Here we report that significant differences in oxygen, iron and sulphur speciation strongly correlate with the distribution of specific taxa in different microhabitats. In higher temperature (> 30 degrees C) microhabitats, the appreciable formation of soluble iron-sulphide molecular clusters markedly reduces the availability of free H2S/HS- to vent (micro)organisms, thus controlling the available habitat.

Impact of the Deepwater Horizon oil spill on a deep-water coral community in the Gulf of Mexico

Abstract: To assess the potential impact of the Deepwater Horizon oil spill on offshore ecosystems, 11 sites hosting deep-water coral communities were examined 3 to 4 mo after the well was capped. Healthy coral communities were observed at all sites >20 km from the Macondo well, including seven sites previously visited in September 2009, where the corals and communities appeared unchanged. However, at one site 11 km southwest of the Macondo well, coral colonies presented widespread signs of stress, including varying degrees of tissue loss, sclerite enlargement, excess mucous production, bleached commensal ophiuroids, and covering by brown flocculent material (floc). On the basis of these criteria the level of impact to individual colonies was ranked from 0 (least impact) to 4 (greatest impact). Of the 43 corals imaged at that site, 46% exhibited evidence of impact on more than half of the colony, whereas nearly a quarter of all of the corals showed impact to >90% of the colony. Additionally, 53% of these corals’ ophiuroid associates displayed abnormal color and/or attachment posture. Analysis of hopanoid petroleum biomarkers isolated from the floc provides strong evidence that this material contained oil from the Macondo well. The presence of recently damaged and deceased corals beneath the path of a previously documented plume emanating from the Macondo well provides compelling evidence that the oil impacted deep-water ecosystems. Our findings underscore the unprecedented nature of the spill in terms of its magnitude, release at depth, and impact to deep-water ecosystems.

The Theory of Island Biogeography

Abstract: Preface to the Princeton Landmarks in Biology Edition vii Preface xi Symbols Used xiii 1. The Importance of Islands 3 2. Area and Number of Speicies 8 3. Further Explanations of the Area-Diversity Pattern 19 4. The Strategy of Colonization 68 5. Invasibility and the Variable Niche 94 6. Stepping Stones and Biotic Exchange 123 7. Evolutionary Changes Following Colonization 145 8. Prospect 181 Glossary 185 References 193 Index 201

Multiple Imputation for Nonresponse in Surveys

Abstract: 25. Multiple Imputation for Nonresponse in Surveys. By D. B. Rubin. ISBN 0 471 08705 X. Wiley, Chichester, 1987. 258 pp. £30.25.

A Molecular View of Microbial Diversity and the Biosphere

Abstract: Over three decades of molecular-phylogenetic studies, researchers have compiled an increasingly robust map of evolutionary diversification showing that the main diversity of life is microbial, distributed among three primary relatedness groups or domains: Archaea, Bacteria, and Eucarya. The general properties of representatives of the three domains indicate that the earliest life was based on inorganic nutrition and that photosynthesis and use of organic compounds for carbon and energy metabolism came comparatively later. The application of molecular-phylogenetic methods to study natural microbial ecosystems without the traditional requirement for cultivation has resulted in the discovery of many unexpected evolutionary lineages; members of some of these lineages are only distantly related to known organisms but are sufficiently abundant that they are likely to have impact on the chemistry of the biosphere.