T
Toby J. Gibson
Researcher at European Bioinformatics Institute
Publications - 176
Citations - 177834
Toby J. Gibson is an academic researcher from European Bioinformatics Institute. The author has contributed to research in topics: Short linear motif & Eukaryotic Linear Motif resource. The author has an hindex of 78, co-authored 171 publications receiving 167371 citations. Previous affiliations of Toby J. Gibson include University of Rome Tor Vergata & University College Dublin.
Papers
More filters
Journal ArticleDOI
Modulation of HIV-1 gene expression by binding of a ULM motif in the Rev protein to UHM-containing splicing factors.
Marta Pabis,Lorenzo Corsini,Michelle Vincendeau,Konstantinos Tripsianes,Toby J. Gibson,Ruth Brack-Werner,Michael Sattler +6 more
TL;DR: The Rev ULM is an example of viral mimicry of host short linear motifs that enables the virus to interfere with the host molecular machinery and contribute to the regulation of HIV-1 transcript processing.
Journal ArticleDOI
Object-oriented parsing of biological databases with Python.
TL;DR: An elegant, simple yet powerful way of parsing biological flat-file databases in a simple and object-oriented way using EMBL, SWISSPROT and GENBANK as examples.
Journal ArticleDOI
Low probability of dystrophin and utrophin coiled coil regions forming dimers
TL;DR: Genetic Data Environment (GDE) analysis of the coiled coil repeat regions of dystrophin and utrophin in comparison with the spectrins has allowed us to compare the structural arrangement of theCoiled coil structures in these proteins.
Journal ArticleDOI
Transcription of Alu DNA elements in blood cells of sporadic Creutzfeldt-Jakob disease (sCJD)
Petra Kiesel,Toby J. Gibson,Barbara Ciesielczyk,Monika Bodemer,Franz-Josef Kaup,Walter Bodemer,Hans Zischler,Inga Zerr +7 more
TL;DR: This work determined in a real-time approach Alu DNA element transcription in buffy coat cells isolated from the blood of humans suffering from sporadic Creutzfeldt-Jakob disease and other neurodegenerative disorders and observed that some RNA/cDNA clones could be aligned to several chromosomes because of the same degree of identity and score to resident genomic AluDNA elements.
Journal ArticleDOI
Protruding domain of tomato bushy stunt virus coat protein is a hitherto unrecognized class of jellyroll conformation.
Toby J. Gibson,Patrick Argos +1 more
TL;DR: The capsid protein of tomato bushy stunt virus (TBSV) has two antiparallel beta-sheet domains with the so-called jellyroll conformation but the TBSV capsid P domain is a unique conformation so far found in no other protein.