Weimin Yang

Bio: Weimin Yang is an academic researcher from University of California, Davis. The author has contributed to research in topics: Gene flow & Understory. The author has an hindex of 1, co-authored 1 publications receiving 220 citations.

A three-dimensional crown architecture model for assessment of light capture and carbon gain by understory plants

Abstract: A model simulating the three-demensional crown architecture of a plant was developed with the objective of assessing the light capture and whole-plant carbon gain consequences of leaf display in understory plants. This model uses geometrical measurements taken in the field to reconstruct the projected image of a plant so that light absorption from any direction can be assessed. The photon flux density (PFD) from a given direction was estimated from the canopy openness derived from hemispherical canopy photographs and equations simulating the daily course of direct and diffuse PFD. For diffuse PFD, the directional fluxes and absorbed PFD were integrated over 160 different directions representing 8 azimuth classes and 20 elevation angle classes. Direct PFD absorption was determined for the time that a solar track on a given day intersected a canopy gap. Assimilation rate was simulated for the sunlit and shaded parts of leaves separately and then summed to give the whole-plant carbon gain. Comparisons of simulations for a tropical forest edge species, Clidemia octona, and an understory species, Conostegia cinnamomea, illustrate the operation of the model and show that the edge species is more efficient at capturing side light while the understory species is slightly more efficient at capturing light from directly above, the predominant light direction in this environment. Self-shading within Conostegia crown and steep leaf angles in the Clidemia crown reduced light capture efficiencies for light from directly above. Whole-plant daily carbon gain was much higher in the forest edge site, mostly because of the additional PFD available in this site. However, simulations for both species in the understory light environment show that the higher light capture efficiencies of the understory species in this environment conferred a 27% advantage in carbon gain in this environment.

A wide hybrid zone mediated by precipitation contributed to confused geographical structure of Scutiger boulengeri

Abstract: Confused geographical structure of a population and mitonuclear discordance are shaped by a combination of rapid changes in population demographics and shifts in ecology. In this study, we generated a time-calibrated phylogeny of Scutiger boulengeri, an endemic Xizang alpine toad occurring in mountain streams on the Qinghai-Xizang (Tibet) Plateau (QTP). Based on three mitochondrial DNA (mtDNA) genes, eight clades were assigned to three deeply divergent lineages. Analysis of nuclear DNA (nuDNA) genes revealed three distinct clusters without geographic structure, indicating significantly high rates of gene flow. Coalescent theory framework analysis (approximate Bayesian computation model DIYABC and Migrate-N) suggested that divergence of the main intraspecific clusters was the result of hybridization after secondary contact in the Holocene around 0.59 million years ago (Ma). The ratio of mtDNA FST (fixation index) to nuDNA FST was 2.3, thus failing to show male-biased dispersal. Geographic cline analysis showed that a wide hybrid zone was initially established in southwestern China, without significant reproductive isolation but with strong introgression in S. boulengeri, suggesting high hybrid fitness. Furthermore, mtDNA genes exhibited isolation by distance (IBD) while nuDNA genes exhibited significant isolation by environment (IBE). Results suggested that mitonuclear discordance may have initially been caused by geographic isolation, followed by precipitation-mediated hybridization, producing a wide hybrid zone and geographic structure confusion of nuDNA genes in S. boulengeri. This study indicated that complicated historical processes may have led to specific genetic patterns, with a specific climate factor facilitating gene flow in the system.

Impacts of root competition in forests and woodlands: a theoretical framework and review of experiments

Abstract: Light is widely considered to be the most important factor limiting the performance of plants on the floors of forests and woodlands, but the roles of nutrient availability and water supply remain poorly defined. We seek to predict the types of forest in which root competition affects seedling performance, and the types of plants that respond most strongly to release from root competition. We then test our predictions by reviewing experiments in which tree seedlings and forest herbs are released from belowground competition, usually by cutting trenches to sever the roots of surrounding trees. First, we provide a worldwide review of changes in canopy form and fine-root mass along gradients of soil fertility and seasonal drought, keeping in mind the stages of forest development. Our review shows that penetration of light is least in forests on moist soils providing large amounts of major nutrients. The changes are far more complex than those considered by allocation models. Dry woodlands typically allow 20 ...

Leaf size and angle vary widely across species: what consequences for light interception?

Abstract: Summary •A rchitecture can vary widely across species. Both steeper leaf angles and increased self-shading are thought to reduce potential carbon gain by decreasing total light interception. An alternative hypothesis is that steeper leaf angles have evolved to improve day-long carbon gain by emphasising light interception from low angles. • Here we relate variation in architectural properties (leaf angle and leaf size) to cross-species patterns of leaf display, light capture and simulated carbon gain in branching-units of 38 perennial species occurring at two sites in Australian forest. Architectural comparison was made possible by combining 3D-digitising with the architecture model YPLANT. • Species with shallow angled leaves had greater daily light interception and potentially greater carbon gain. Self-shading, rather than leaf angle, explained most variance between species in light capture and potential carbon gain. Species average leaf size was the most important determinant of self-shading. • Our results provide the first cross-species evidence that steeper leaf angles function to reduce exposure to excess light levels during the middle of the day, more than to maximise carbon gain.

The Evolution of Plant Ecophysiological Traits: Recent Advances and Future Directions

Abstract: functional diversity, which underlies variation in growth rates, productivity, population and community dynamics, and ecosystem function. The broad congruence of these variations with climatic and environmental conditions on local, regional, and global scales has fostered the concept that plant ecophysiological characteristics are well adapted to their local circumstances. For example, the repeated occurrence of plants with CAM (Crassulacean Acid Metabolism) photosynthesis and succulent leaves or stems in severely water-limited environments, and the independent evolution of these traits in numerous plant lineages, provides compelling evidence of the physiological evolution of these water-conserving traits under the influence of natural selection (Ehleringer and Monson 1993). Similarly, studies of the evolution of heavy metal tolerance confirm that natural selection may cause rapid ecophysiological evolution in just a few generations, leading to local adaptation in populations just a few meters apart (Antonovics et al. 1971). Many ecophysiological traits—considered here as all aspects of resource uptake and utilization, including biochemistry, metabolism, gas exchange, leaf structure and function, nutrient and biomass allocation, canopy structure, and growth—are likely to influence fitness and undergo adaptive evolution. Traits affecting the assimilation and use of resources such as carbon, water, and nutrients directly influence plant growth. Patterns of resource allocation to growth, reproduction, defense, and stress tolerance are also likely to be under strong selection. Phenotypic plasticity, the expression of different phenotypes by

Putative Role of Aquaporins in Variable Hydraulic Conductance of Leaves in Response to Light

Abstract: Molecular and physiological studies in walnut (Juglans regia) are combined to establish the putative role of leaf plasma membrane aquaporins in the response of leaf hydraulic conductance (K-leaf) to irradiance. The effects of light and temperature on K-leaf are described. Under dark conditions, K-leaf was low, but increased by 400% upon exposure to light. In contrast to dark conditions, K-leaf values of light-exposed leaves responded to temperature and 0.1 mM cycloheximide treatments. Furthermore, K-leaf was not related to stomatal aperture. Data of real-time reverse transcription-polymerase chain reaction showed that K-leaf dynamics were tightly correlated with the transcript abundance of two walnut aquaporins (JrPIP2,1 and JrPIP2,2). Low K-leaf in the dark was associated with down-regulation, whereas high K-leaf in the light was associated with up-regulation of JrPIP2. Light responses of K-leaf and aquaporin transcripts were reversible and inhibited by cycloheximide, indicating the importance of de novo protein biosynthesis inthisprocess. Our results indicate that walnut leaves can rapidly change their hydraulic conductance and suggest that these changes can be explained by regulation of plasma membrane aquaporins. Model simulation suggests that variable leaf hydraulic conductance in walnut might enhance leaf gas exchanges while buffering leaf water status in response to ambient light fluctuations.

Crown architecture in sun and shade environments: assessing function and trade‐offs with a three‐dimensional simulation model

Abstract: Summary Sun and shade environments place markedly different constraints on the photosynthetic performance of plants. Leaf-level photosynthetic responses to sun and shade have been extensively investigated, whereas there has been much less research on the functional role of crown architecture in these environments. This paper focuses on the role of architecture in maximizing light capture and photosynthesis in shaded understories and in minimizing exposure to excess radiation in open high light environments. Understanding these contrasting roles of architecture is facilitated by application of a three-dimensional structural‐functional model, Y-plant. Surveys of understory plants reveal a diversity of architectures but a strong convergence at only modest light-capture efficiencies because of significant self-shading. Simulations with Psychotria species revealed that increasing internode lengths would increase light-capture efficiencies and whole plant carbon gain. However, the costs of the additional required biomechanical support was high, which, in terms of relative growth rates, would override the advantage provided by higher light-capture efficiencies. In high light environments, leaf angles and self-shading provide structural photoprotection, minimizing potential damage from photoinhbition. Simulations reveal that without these structural protections photoinhibition of photosynthesis is likely to be much greater with daily carbon gain significantly reduced.