William J. Liss

Bio: William J. Liss is an academic researcher from Oregon State University. The author has contributed to research in topics: Trout & Oncorhynchus. The author has an hindex of 17, co-authored 39 publications receiving 4197 citations.

A hierarchical framework for stream habitat classification: Viewing streams in a watershed context

Abstract: Classification of streams and stream habitats is useful for research involving establishment of monitoring stations, determination of local impacts of land-use practices, generalization from site-specific data, and assessment of basin-wide, cumulative impacts of human activities on streams and their biota. This article presents a frame-work for a hierarchical classification system, entailing an organized view of spatial and temporal variation among and within stream systems. Stream habitat systems, defined and classified on several spatiotemporal scales, are associated with watershed geomorphic features and events. Variables selected for classification define relative long-term capacities of systems, not simply short-term states. Streams and their watershed environments are classified within the context of a regional biogeoclimatic landscape classification. The framework is a perspective that should allow more systematic interpretation and description of watershed-stream relationships.

A general protocol for restoration of regulated rivers

Abstract: Large catchment basins may be viewed as ecosystems in which natural and cultural attributes interact. Contemporary river ecology emphasizes the four-dimensional nature of the river continuum and the propensity for riverine biodiversity and bioproduction to be largely controlled by habitat maintenance processes, such as cut and fill alluviation mediated by catchment water yield. Stream regulation reduces annual flow amplitude, increases baseflow variation and changes temperature, mass transport and other important biophysical patterns and attributes. As a result, ecological connectivity between upstream and downstream reaches and between channels, ground waters and floodplains may be severed. Native biodiversity and bioproduction usually are reduced or changed and non-native biota proliferate. Regulated rivers regain normative attributes as distance from the dam increases and in relation to the mode of dam operation. Therefore, dam operations can be used to restructure altered temperature and flow regimes which, coupled with pollution abatement and management of non-native biota, enables natural processes to restore damaged habitats along the river’s course. The expectation is recovery of depressed populations of native species. The protocol requires: restoring peak flows needed to reconnect and periodically reconfigure channel and floodplain habitats; stabilizing baseflows to revitalize food-webs in shallow water habitats; reconstituting seasonal temperature patterns (e.g. by construction of depth selective withdrawal systems on storage dams); maximizing dam passage to allow recovery of fish metapopulation structure; instituting a management belief system that relies upon natural habitat restoration and maintenance, as opposed to artificial propagation, installation of artificial instream structures (river engineering) and predator control; and, practising adaptive ecosystem management. Our restoration protocol should be viewed as an hypothesis derived from the principles of river ecology. Although restoration to aboriginal state is not expected, nor necessarily desired, recovering some large portion of the lost capacity to sustain native biodiversity and bioproduction is possible by management for processes that maintain normative habitat conditions. The cost may be less than expected because the river can do most of the work.

Relationship between stream temperature, thermal refugia and rainbow trout Oncorhynchus mykiss abundance in arid‐land streams in the northwestern United States

Abstract: – Warm stream temperatures may effectively limit the distribution and abundance of Pacific salmon Oncorhynchus spp. in streams. The role of cold thermal refugia created by upwelling groundwater in mediating this effect has been hypothesized but not quantitatively described. Between June 21 and September 15, 1994, rainbow trout O. mykiss abundance within 12 northeast Oregon (USA) stream reaches was inversely correlated with mean ambient maximum stream temperatures (r=−0.7, P 22°C) persisted from mid-June through August, and on average 10–40% of rainbow trout were observed within thermal refugia during periods of midday maximum stream temperatures. Frequency of cold-water patches within reaches was not significantly associated with rainbow trout density after accounting for the influence of ambient stream temperature (P=0.06; extra sum of squares F-test). Given prolonged high ambient stream temperatures in some reaches, the thermal refugia available in the streams we examined may be too small and too infrequent to sustain high densities of rainbow trout. However, these refugia could allow some rainbow trout to persist, although at low densities, in warm stream reaches.

Thermal heterogeneity, stream channel morphology, and salmonid abundance in northeastern Oregon streams

Abstract: Heterogeneity in stream water temperatures created by local influx of cooler subsurface waters into geomorphically complex stream channels was associated with increased abundance of rainbow trout (Oncorhynchus mykiss) and chinook salmon (Oncorhynchus tshawytscha ) in northeastern Oregon. The addition of cold water patch frequency and area as explanatory variables in salmonid habitat models indicated that doubling of cold water patch frequency was associated with increases in rainbow trout and chinook salmon abundances of 31% and 59%, respec- tively. Doubling of cold water patch area was associated with changes of 10% in rainbow trout abundance but was not associated with chinook abundance after accounting for other habitat factors. The physiognomy, distribution, and con - nectivity of cold water patches, important attributes determining the effectiveness of these habitats as thermal refuges for stream fishes, were associated with channel bedform and riparian features. Monitoring of thermal heterogeneity and salmonid populations in response to ongoing habitat restoration efforts will provide additional insights into causal rela - tionships among these factors.

Cold Water Patches in Warm Streams: Physicochemical Characteristics and the Influence of Shading

Abstract: Discrete cold water patches within the surface waters of summer warm streams afford potential thermal refuge for cold water fishes during periods of heat stress. This analysis focused on reach scale heterogeneity in water temperatures as influenced by local influx of cooler subsurface waters. Using field thermal probes and recording thermistors, we identified and characterized cold water patches (at least 3°C colder than ambient streamflow temperatures) potentially serving as thermal refugia for cold water fishes. Among 37 study sites within alluvial valleys of the Grande Ronde basin in northeastern Oregon, we identified cold water patches associated with side channels, alcoves, lateral seeps, and floodplain spring brooks. These types differed with regard to within floodplain position, area, spatial thermal range, substrate, and availability of cover for fish. Experimental shading cooled daily maximum temperatures of surface waters within cold water patches 2 to 4°C, indicating a strong influence of riparian vegetation on the expression of cold water patch thermal characteristics. Strong vertical temperature gradients associated with heating of surface layers of cold water patches exposed to solar radiation, superimposed upon vertical gradients in dissolved oxygen, can partially restrict suitable refuge volumes for stream salmonids within cold water patches.

The Theory of Island Biogeography

Abstract: Preface to the Princeton Landmarks in Biology Edition vii Preface xi Symbols Used xiii 1. The Importance of Islands 3 2. Area and Number of Speicies 8 3. Further Explanations of the Area-Diversity Pattern 19 4. The Strategy of Colonization 68 5. Invasibility and the Variable Niche 94 6. Stepping Stones and Biotic Exchange 123 7. Evolutionary Changes Following Colonization 145 8. Prospect 181 Glossary 185 References 193 Index 201

The Natural Flow Regime

Abstract: H umans have long been fascinated by the dynamism of free-flowing waters. Yet we have expended great effort to tame rivers for transportation, water supply, flood control, agriculture, and power generation. It is now recognized that harnessing of streams and rivers comes at great cost: Many rivers no longer support socially valued native species or sustain healthy ecosystems that provide important goods and services (Naiman et al. 1995, NRC 1992).

Landscapes and Riverscapes: The Influence of Land Use on Stream Ecosystems

Abstract: ▪ Abstract Local habitat and biological diversity of streams and rivers are strongly influenced by landform and land use within the surrounding valley at multiple scales. However, empirical associations between land use and stream response only varyingly succeed in implicating pathways of influence. This is the case for a number of reasons, including (a) covariation of anthropogenic and natural gradients in the landscape; (b) the existence of multiple, scale-dependent mechanisms; (c) nonlinear responses; and (d) the difficulties of separating present-day from historical influences. Further research is needed that examines responses to land use under different management strategies and that employs response variables that have greater diagnostic value than many of the aggregated measures in current use. In every respect, the valley rules the stream. H.B.N. Hynes (1975)

Basic principles and ecological consequences of altered flow regimes for aquatic biodiversity.

Abstract: The flow regime is regarded by many aquatic ecologists to be the key driver of river and floodplain wet- land ecosystems. We have focused this literature review around four key principles to highlight the important mech- anisms that link hydrology and aquatic biodiversity and to illustrate the consequent impacts of altered flow regimes: Firstly, flow is a major determinant of physical habitat in streams, which in turn is a major determinant of biotic com- position; Secondly, aquatic species have evolved life history strategies primarily in direct response to the natural flow regimes; Thirdly, maintenance of natural patterns of longitu- dinal and lateral connectivity is essential to the viability of populations of many riverine species; Finally, the invasion and success of exotic and introduced species in rivers is facilitated by the alteration of flow regimes. The impacts of flow change are manifest across broad taxonomic groups including riverine plants, invertebrates, and fish. Despite growing recognition of these relationships, ecologists still struggle to predict and quantify biotic responses to altered flow regimes. One obvious difficulty is the ability to distin- guish the direct effects of modified flow regimes from im- pacts associated with land-use change that often accom- panies water resource development. Currently, evidence about how rivers function in relation to flow regime and the flows that aquatic organisms need exists largely as a series of untested hypotheses. To overcome these problems, aquatic science needs to move quickly into a manipulative or experimental phase, preferably with the aims of restora- tion and measuring ecosystem response.

An Ecosystem Perspective of Riparian Zones

Abstract: R iparian zones are the interfaces between terrestrial and aquatic ecosystems. As ecotones, they encompass sharp gradients of environmental factors, ecological processes, and plant communities. Riparian zones are not easily delineated but are comprised of mosaics of landforms, communities, and environments within the larger landscape. We propose a conceptual model of riparian tones that integrates the physical processes that shape valleyfloor landscapes, the succession of terrestrial plant communities on these geomorphic surfaces, the formation of habitat, and the production of nutritional resources for aquatic ecosys-