YuanTong Gu

Bio: YuanTong Gu is an academic researcher from Queensland University of Technology. The author has contributed to research in topics: Finite element method & Meshfree methods. The author has an hindex of 52, co-authored 550 publications receiving 12583 citations. Previous affiliations of YuanTong Gu include Nanjing Medical University & National University of Singapore.

Shape dependent protein‐induced stabilization of gold nanoparticles: From a protein corona perspective

Abstract: Abstract Gold nanoparticles (AuNPs) are promising materials for many bioapplications. However, upon contacting with biological media, AuNPs undergo changes. The interaction with proteins results in the so-called protein corona (PC) around AuNPs, leading to the new bioidentity and optical properties. Understanding the mechanisms of PC formation and its functions can help us to utilise its benefits and avoid its drawbacks. To date, most of the previous works aimed to understand the mechanisms governing PC formation and focused on the spherical nanoparticles, although non-spherical nanoparticles are designed for a wide range of applications in biosensing. In this work, we investigated the differences in PC formation on spherical and anisotropic AuNPs (nanostars in particular) from the joint experimental (extinction spectroscopy, zeta potential and surface-enhanced Raman scattering [SERS]) and computational methods (the finite element method and molecular dynamics [MD] simulations). We discovered that protein does not fully cover the surface of anisotropic nanoparticles, leaving SERS hot-spots at the tips and high curvature edges ‘available’ for analyte binding (no SERS signal after pre-incubation with protein) while providing protein-induced stabilization (indicated by extinction spectroscopy) of the AuNPs by providing a protein layer around the particle's core. The findings are confirmed from our MD simulations, the adsorption energy significantly decreases with the increased radius of curvature, so that tips (adsorption energy: 2762.334 kJ/mol) would be the least preferential binding site compared to core (adsorption energy: 11819.263 kJ/mol). These observations will help the development of new nanostructures with improved sensing and targeting ability.

Automated scanning electron microscopy with energy dispersive spectrometry

Abstract: Written by a collection of internationally recognised specialists, this book is a practical and informative resource for anyone whose job is related to minerals and their processing. As the title suggests the book is about process mineralogy and provides information on a number of the currently available tools for mineral characterisation together with a wide range of examples showing how they can be applied. The chapters of the book have been divided into three main sections with the first highlighting a number of the key tools and techniques used to collect the mineralogical data needed to measure process performance. Information on how to apply the resulting data in process analysis is provided in the second section of the book while the final section is dedicated to case studies. The case study section provides a unique collection of examples which demonstrate current practice in the selection and application of characterisation tools to solve process mineralogy problems in a broad range of commodities and processing contexts.

Unsteady natural convection within a differentially heated enclosure of sinusoidal corrugated side walls

Abstract: Numerically investigation of natural convection within a differentially heated modified square enclosure with sinusoidally corrugated side walls has been performed for different values of Rayleigh number. The fluid inside the enclosure considered is air and is quiescent, initially. The top and bottom surfaces are flat and considered as adiabatic. Results reveal three main stages: an initial stage, a transitory or oscillatory stage and a steady stage for the development of natural convection flow inside the corrugated cavity. The numerical scheme is based on the finite element method adapted to triangular non-uniform mesh element by a non-linear parametric solution algorithm. Investigation has been performed for the Rayleigh number, Ra ranging from 105 to 108 with variation of corrugation amplitude and frequency. Constant physical properties for the fluid medium have been assumed. Results have been presented in terms of the isotherms, streamlines, temperature plots, average Nusselt numbers, traveling waves and thermal boundary layer thickness plots, temperature and velocity profiles. The effects of sudden differential heating and its consequent transient behavior on fluid flow and heat transfer characteristics have been observed for the range of governing parameters. The present results show that the transient phenomena are greatly influenced by the variation of the Rayleigh Number with corrugation amplitude and frequency.

Porohyperelastic Analysis of Single Osteocyte Using AFM and Inverse FEA

Abstract: Osteocytes are the mature cells and perform as mechanosensors within the bone. The mechanical property of osteocytes plays an important role to fulfill these functions. However, little researches have been done to investigate the mechanical deformation properties of single osteocytes. Atomic Force Microscopy (AFM) is a state-of-art experimental facility for high resolution imaging of tissues, cells and any surfaces as well as for probing mechanical properties of the samples both qualitatively and quantitatively. In this paper, the experi-mental study based on AFM is firstly used to obtain force-indentation curves of single round osteocytes. The porohypere-lastic (PHE) model of a single osteocyte is then developed by using the inverse finite element analysis (FEA) to identify and extract mechanical properties from the experiment results. It has been found that the PHE model is a good candidature for biomechanics studies of osteocytes.

Meshless local Petrov–Galerkin (MLPG) method in combination with finite element and boundary element approaches

Abstract: The Meshless Local Petrov-Galerkin (MLPG) method is an effective truly meshless method for solving partial differential equations using Moving Least Squares (MLS) interpolants. It is, however, computationally expensive for some problems. A coupled MLPG/Finite Element (FE) method and a coupled MLPG/Boundary Element (BE) method are proposed in this paper to improve the solution efficiency. A procedure is developed for the coupled MLPG/FE method and the coupled MLPG/BE method so that the continuity and compatibility are preserved on the interface of the two domains where the MLPG and FE or BE methods are applied. The validity and efficiency of the MLPG/FE and MLPG/BE methods are demonstrated through a number of examples. KEY WORDS: Meshless Method; Meshless Local-Galerkin Method; Finite element Method; Boundary Element Method; Stress Analysis

I and i

Abstract: There is, I think, something ethereal about i —the square root of minus one. I remember first hearing about it at school. It seemed an odd beast at that time—an intruder hovering on the edge of reality. Usually familiarity dulls this sense of the bizarre, but in the case of i it was the reverse: over the years the sense of its surreal nature intensified. It seemed that it was impossible to write mathematics that described the real world in …

Fast parallel algorithms for short-range molecular dynamics

Abstract: Three parallel algorithms for classical molecular dynamics are presented. The first assigns each processor a fixed subset of atoms; the second assigns each a fixed subset of inter-atomic forces to compute; the third assigns each a fixed spatial region. The algorithms are suitable for molecular dynamics models which can be difficult to parallelize efficiently—those with short-range forces where the neighbors of each atom change rapidly. They can be implemented on any distributed-memory parallel machine which allows for message-passing of data between independently executing processors. The algorithms are tested on a standard Lennard-Jones benchmark problem for system sizes ranging from 500 to 100,000,000 atoms on several parallel supercomputers--the nCUBE 2, Intel iPSC/860 and Paragon, and Cray T3D. Comparing the results to the fastest reported vectorized Cray Y-MP and C90 algorithm shows that the current generation of parallel machines is competitive with conventional vector supercomputers even for small problems. For large problems, the spatial algorithm achieves parallel efficiencies of 90% and a 1840-node Intel Paragon performs up to 165 faster than a single Cray C9O processor. Trade-offs between the three algorithms and guidelines for adapting them to more complex molecular dynamics simulations are also discussed.

Mitigation and Adaptation Strategies for Global Change

Abstract: ▶ Addresses a wide range of timely environment, economic and energy topics ▶ A forum to review, analyze and stimulate the development, testing and implementation of mitigation and adaptation strategies at regional, national and global scales ▶ Contributes to real-time policy analysis and development as national and international policies and agreements are discussed and promulgated ▶ 94% of authors who answered a survey reported that they would definitely publish or probably publish in the journal again