Zhiyu Peng

TL;DR: The sequencing and assembly of the oyster genome using short reads and a fosmid-pooling strategy and transcriptomes of development and stress response and the proteome of the shell are reported, showing that shell formation in molluscs is more complex than currently understood and involves extensive participation of cells and their exosomes.

TL;DR: The complete SEQC data sets, comprising >100 billion reads, provide unique resources for evaluating RNA-seq analyses for clinical and regulatory settings, and measurement performance depends on the platform and data analysis pipeline, and variation is large for transcript-level profiling.

TL;DR: The genetic architecture of maize oil biosynthesis is extensively examined in a genome-wide association study using 1.03 million SNPs characterized in 368 maize inbred lines, including 'high-oil' lines, to provide insights into the genetic basis ofOil biosynthesis in maize kernels.

TL;DR: A comprehensive profile of the RNA editome of a male Han Chinese individual is described based on analysis of ∼767 million sequencing reads from poly(A)+, poly( A)− and small RNA samples and 44 editing sites in microRNAs are found, suggesting a potential link between RNA editing and miRNA-mediated regulation.

TL;DR: The results indicate that the phenotypic status of ccRCC is characterized by a loss of normal renal function, downregulation of metabolic genes, and upregulation of many signal transduction genes in key pathways.