Academia Sinica

About: Academia Sinica is a facility organization based out in Taipei, Taiwan. It is known for research contribution in the topics: Population & Galaxy. The organization has 52086 authors who have published 65998 publications receiving 1728114 citations. The organization is also known as: Central Research Academy.

Comparative Analysis of the Receptor-Like Kinase Family in Arabidopsis and Rice

Abstract: Receptor-like kinases (RLKs) belong to the large RLK/Pelle gene family, and it is known that the Arabidopsis thaliana genome contains >600 such members, which play important roles in plant growth, development, and defense responses. Surprisingly, we found that rice (Oryza sativa) has nearly twice as many RLK/Pelle members as Arabidopsis does, and it is not simply a consequence of a larger predicted gene number in rice. From the inferred phylogeny of all Arabidopsis and rice RLK/Pelle members, we estimated that the common ancestor of Arabidopsis and rice had >440 RLK/Pelles and that large-scale expansions of certain RLK/Pelle members and fusions of novel domains have occurred in both the Arabidopsis and rice lineages since their divergence. In addition, the extracellular domains have higher nonsynonymous substitution rates than the intracellular domains, consistent with the role of extracellular domains in sensing diverse signals. The lineage-specific expansions in Arabidopsis can be attributed to both tandem and large-scale duplications, whereas tandem duplication seems to be the major mechanism for recent expansions in rice. Interestingly, although the RLKs that are involved in development seem to have rarely been duplicated after the Arabidopsis–rice split, those that are involved in defense/disease resistance apparently have undergone many duplication events. These findings led us to hypothesize that most of the recent expansions of the RLK/Pelle family have involved defense/resistance-related genes.

Functional Data Analysis

Abstract: With the advance of modern technology, more and more data are being recorded continuously during a time interval or intermittently at several discrete time points. These are both examples of functional data, which has become a commonly encountered type of data. Functional data analysis (FDA) encompasses the statistical methodology for such data. Broadly interpreted, FDA deals with the analysis and theory of data that are in the form of functions. This paper provides an overview of FDA, starting with simple statistical notions such as mean and covariance functions, then covering some core techniques, the most popular of which is functional principal component analysis (FPCA). FPCA is an important dimension reduction tool, and in sparse data situations it can be used to impute functional data that are sparsely observed. Other dimension reduction approaches are also discussed. In addition, we review another core technique, functional linear regression, as well as clustering and classification of functional d...

Bright Fluorescent Nanodiamonds: No Photobleaching and Low Cytotoxicity

Abstract: Diamond nanocrystals emit bright fluorescence at 600−800 nm after irradiation by a 3 MeV proton beam (5 × 1015 ions/cm2) and annealing at 800 °C (2 h) in vacuum. The irradiation/annealing process yields high concentrations of nitrogen-vacancy defect centers (∼107 centers/μm3), making possible visualization of the individual 100 nm diamond crystallites using a fluorescence microscope. The fluorescent nanodiamonds (FND) show no sign of photobleaching and can be taken up by mammalian cells with minimal cytotoxicity. The nanomaterial can have far-reaching biological applications.

Surface plasmonic effects of metallic nanoparticles on the performance of polymer bulk heterojunction solar cells

Abstract: We have systematically explored how plasmonic effects influence the characteristics of polymer photovoltaic devices (OPVs) incorporating a blend of poly(3-hexylthiophene) (P3HT) and [6,6]-phenyl-C61-butyric acid methyl ester (PCBM). We blended gold nanoparticles (Au NPs) into the anodic buffer layer to trigger localized surface plasmon resonance (LSPR), which enhanced the performance of the OPVs without dramatically sacrificing their electrical properties. Steady state photoluminescence (PL) measurements revealed a significant increase in fluorescence intensity, which we attribute to the increased light absorption in P3HT induced by the LSPR. As a result, the rate of generation of excitons was enhanced significantly. Furthermore, dynamic PL measurements revealed that the LSPR notably reduced the lifetime of photogenerated excitons in the active blend, suggesting that interplay between the surface plasmons and excitons facilitated the charge transfer process. This phenomenon reduced the recombination level...