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Showing papers by "Agriculture and Agri-Food Canada published in 2004"


Journal ArticleDOI
TL;DR: In this paper, a method for minimizing the effect of leaf chlorophyll content on the prediction of green LAI was presented, and new algorithms that adequately predict the LAI of crop canopies.

1,915 citations


Journal ArticleDOI
TL;DR: This consensus map represents the highest-density public microsatellite map of wheat and is accompanied by an allele database showing the parent allele sizes for every marker mapped, which enables users to predict allele sizes in new breeding populations and develop molecular breeding and genomics strategies.
Abstract: A microsatellite consensus map was constructed by joining four independent genetic maps of bread wheat. Three of the maps were F1-derived, doubled-haploid line populations and the fourth population was ‘Synthetic’ × ‘Opata’, an F6-derived, recombinant-inbred line population. Microsatellite markers from different research groups including the Wheat Microsatellite Consortium, GWM, GDM, CFA, CFD, and BARC were used in the mapping. A sufficient number of common loci between genetic maps, ranging from 52 to 232 loci, were mapped on different populations to facilitate joining the maps. Four genetic maps were developed using MapMaker V3.0 and JoinMap V3.0. The software CMap, a comparative map viewer, was used to align the four maps and identify potential errors based on consensus. JoinMap V3.0 was used to calculate marker order and recombination distances based on the consensus of the four maps. A total of 1,235 microsatellite loci were mapped, covering 2,569 cM, giving an average interval distance of 2.2 cM. This consensus map represents the highest-density public microsatellite map of wheat and is accompanied by an allele database showing the parent allele sizes for every marker mapped. This enables users to predict allele sizes in new breeding populations and develop molecular breeding and genomics strategies.

1,761 citations


Journal ArticleDOI
TL;DR: The current advances in flavonoids in food is reviewed, with emphasis on health aspects on the basis of the published literature, which may provide some guidance for researchers in further investigations and for industries in developing practical health agents.
Abstract: There has been increasing interest in the research of flavonoids from dietary sources, due to growing evidence of the versatile health benefits of flavonoids through epidemiological studies. As occurrence of flavonoids is directly associated with human daily dietary intake of antioxidants, it is important to evaluate flavonoid sources in food. Fruits and vegetables are the main dietary sources of flavonoids for humans, along with tea and wine. However, there is still difficulty in accurately measuring the daily intake of flavonoids because of the complexity of existence of flavonoids from various food sources, the diversity of dietary culture, and the occurrence of a large amount of flavonoids itself in nature. Nevertheless, research on the health aspects of flavonoids for humans is expanding rapidly. Many flavonoids are shown to have antioxidative activity, free-radical scavenging capacity, coronary heart disease prevention, and anticancer activity, while some flavonoids exhibit potential for anti-human immunodeficiency virus functions. As such research progresses. further achievements will undoubtedly lead to a new era of flavonoids in either foods or pharmaceutical supplements. Accordingly, an appropriate model for a precise assessment of intake of flavonoids needs to be developed. Most recent research has focused on the health aspects of flavonoids from food sources for humans. This paper reviews the current advances in flavonoids in food, with emphasis on health aspects on the basis of the published literature, which may provide some guidance for researchers in further investigations and for industries in developing practical health agents.

1,345 citations


Journal ArticleDOI
TL;DR: This study provides a phylogenetic synthesis for the Fungi and a framework for future phylogenetic studies on fungi and the impact of this newly discovered phylogenetic structure on supraordinal classifications is discussed.
Abstract: Based on an overview of progress in molecular systematics of the true fungi (Fungi/Eumycota) since 1990, little overlap was found among single-locus data matrices, which explains why no large-scale multilocus phylogenetic analysis had been undertaken to reveal deep relationships among fungi. As part of the project ‘‘Assembling the Fungal Tree of Life’’ (AFTOL), results of four Bayesian analyses are reported with complementary bootstrap assessment of phylogenetic confidence based on (1) a combined two-locus data set (nucSSU and nucLSU rDNA) with 558 species representing all traditionally recognized fungal phyla (Ascomycota, Basidiomycota, Chytridiomycota, Zygomycota) and the Glomeromycota, (2) a combined three-locus data set (nucSSU, nucLSU, and mitSSU rDNA) with 236 species, (3) a combined three-locus data set (nucSSU, nucLSU rDNA, and RPB2) with 157 species, and (4) a combined four-locus data set (nucSSU, nucLSU, mitSSU rDNA, and RPB2) with 103 species. Because of the lack of complementarity among single-locus data sets, the last three analyses included only members of the Ascomycota and Basidiomycota. The four-locus analysis resolved multiple deep relationships within the Ascomycota and Basidiomycota that were not revealed previously or that received only weak support in previous studies. The impact of this newly discovered phylogenetic structure on supraordinal classifications is discussed. Based on these results and reanalysis of subcellular data, current knowledge of the evolution of septal features of fungal hyphae is synthesized, and a preliminary reassessment of ascomal evolution is presented. Based on previously unpublished data and sequences from GenBank, this study provides a phylogenetic synthesis for the Fungi and a framework for future phylogenetic studies on fungi.

754 citations


Journal ArticleDOI
TL;DR: In this article, the authors provide an overview of aspects related to starch granule size, including procedures for determining the size, the impact of granules size on the physicochemical characteristics of starch, and biosynthetic and environmental determinants of granule sizes.
Abstract: Granule size, size distribution and shape are among the most important morphologically distinguishing factors of starches from different origins. This article provides an overview of aspects related to starch granule size, including procedures for determining the size, the impact of granule size on the physicochemical characteristics of starch, and biosynthetic and environmental determinants of granule size. The focus is on small granule starches, including their isolation and current and potential utilization.

644 citations


Journal ArticleDOI
TL;DR: In addition to their natural function of hydrolyzing carboxylic ester bonds, lipases can catalyze esterification, interesterification, and transesterification reactions in nonaqueous media, which makes lipases the enzymes of choice for potential applications in the food, detergent, pharmaceutical, leather, textile, cosmetic, and paper industries.
Abstract: Lipases (triacylglycerol acylhydrolase, EC 3.1.1.3) are part of the family of hydrolases that act on carboxylic ester bonds. The physiologic role of lipases is to hydrolyze triglycerides into diglycerides, monoglycerides, fatty acids, and glycerol. These enzymes are widely found throughout the animal and plant kingdoms, as well as in molds and bacteria. Of all known enzymes, lipases have attracted the most scientific attention. In addition to their natural function of hydrolyzing carboxylic ester bonds, lipases can catalyze esterification, interesterification, and transesterification reactions in nonaqueous media. This versatility makes lipases the enzymes of choice for potential applications in the food, detergent, pharmaceutical, leather, textile, cosmetic, and paper industries. The most significant industrial applications of lipases have been mainly found in the food, detergent, and pharmaceutical sectors. Limitations of the industrial use of these enzymes have mainly been owing to their high production costs, which may be overcome by molecular technologies, enabling the production of these enzymes at high levels and in a virtually purified form.

561 citations


Journal ArticleDOI
TL;DR: This paper reviewed the global carbon cycle, examined how humans have modified it, and contemplate (from a soil science bias) the new questions that await us on a changing earth, not to propose a way forward, but to invite conversation about opportunities that have emerged.

550 citations


Journal ArticleDOI
TL;DR: This review of marker genes used for transgenic and transplastomic plant research or crop development has been assessed for efficiency, biosafety, scientific applications and commercialization and two have emerged with significant potential.

534 citations


Journal ArticleDOI
TL;DR: It is demonstrated that sunflower oil, ionophores, and possibly some yeast products can be used to decrease the GE lost as methane from cattle, but fiber digestibility is impaired with oil supplementation.
Abstract: Methane emitted from the livestock sector contributes to greenhouse gas (GHG) emissions. Understanding the effects of diet on enteric methane production can help refine GHG emission inventories and identify viable GHG reduction strategies. Our study focused on measuring methane and carbon dioxide emissions, total-tract digestibility, and ruminal fermentation in growing beef cattle fed a diet supplemented with various additives or ingredients. Two experiments, each designed as a 4 x 4 Latin square with 21-d periods, were conducted using 16 Holstein steers (initial BW 311.6 +/- 12.3 kg). In Exp. 1, treatments were control (no additive), monensin (Rumensin, Elanco Animal Health, Indianapolis, IN; 33 mg/kg DM), sunflower oil (400 g/d, approximately 5% of DMI), and proteolytic enzyme (Protex 6-L, Genencor Int., Inc., CA; 1 mL/kg DM). In Exp. 2, treatments were control (no additive), Procreatin-7 yeast (Prince Agri Products, Inc., Quincy, IL; 4 g/d), Levucell SC yeast (Lallemand, Inc., Rexdale, Ontario, Canada; 1 g/d), and fumaric acid (Bartek Ingredients Inc., Stoney Creek, Ontario, Canada; 80 g/d). The basal diet consisted of 75% barley silage, 19% steam-rolled barley grain, and 6% supplement (DM basis). Four large chambers (two animals per chamber) were equipped with lasers and infrared gas analyzers to measure methane and carbon dioxide, respectively, for 3 d each period. Total-tract digestibility was determined using chromic oxide. Approximately 6.5% of the GE consumed was lost in the form of methane emissions from animals fed the control diet. In Exp. 1, sunflower oil decreased methane emissions by 22% (P = 0.001) compared with the control, whereas monensin (P = 0.44) and enzyme had no effect (P = 0.82). However, oil decreased (P = 0.03) the total-tract digestibility of NDF by 20%. When CH(4) emissions were corrected for differences in energy intake, the loss of GE to methane was decreased by 21% (P = 0.002) using oil and by 9% (P = 0.09) using monensin. In Exp. 2, Procreatin-7 yeast (P = 0.72), Levucell SC yeast (P = 0.28), and fumaric acid (P = 0.21) had no effect on methane emissions, although emissions as a percentage of GE intake were 3% (non-significant, P = 0.39) less for steers fed Procreatin-7 yeast compared with the control. This study demonstrates that sunflower oil, ionophores, and possibly some yeast products can be used to decrease the GE lost as methane from cattle, but fiber digestibility is impaired with oil supplementation.

460 citations


Journal ArticleDOI
TL;DR: Twenty-six species had ITS sequences identical or nearly identical to formerly described species, suggesting possible conspecificity and the importance of comparing ITS sequences of putative new species to the now available ITS database in order to avoid unwarranted new species names being introduced.

408 citations


Journal ArticleDOI
TL;DR: The present review focuses on the antioxidant activity, chemical types, sampling and sample processing procedures, and separation using various chromatographic and electrophoretic techniques.

Journal ArticleDOI
TL;DR: An optimum thermal process can increase the stability and maintain the saponins in canned bean products, which is useful for assisting the food industry to improve thermal processing technology and enhance bean product quality.
Abstract: Demand for bean products is growing because of the presence of several health-promoting components in edible bean products such as saponins. Saponins are naturally occurring compounds that are widely distributed in all cells of legume plants. Saponins, which derive their name from their ability to form stable, soaplike foams in aqueous solutions, constitute a complex and chemically diverse group of compounds. In chemical terms, saponins contain a carbohydrate moiety attached to a triterpenoid or steroids. Saponins are attracting considerable interest as a result of their diverse properties, both deleterious and beneficial. Clinical studies have suggested that these health-promoting components, saponins, affect the immune system in ways that help to protect the human body against cancers, and also lower cholesterol levels. Saponins decrease blood lipids, lower cancer risks, and lower blood glucose response. A high saponin diet can be used in the inhibition of dental caries and platelet aggregation, in the ...

Journal ArticleDOI
TL;DR: This manuscript reviews several source tracking methodologies which are in current use for source tracking fecal bacteria in the environment including: ribotyping, pulse-field gel electrophoresis, denaturing-gradient gel electrospecies, repetitive DNA sequences (Rep-PCR), host-specific 16S rDNA genetic markers, and antibiotic resistance analysis.

Journal ArticleDOI
TL;DR: Improved techniques are further required to evaluate the CLA profile in monogastric animals fed commercial CLA preparations for CLA enrichment of animal products and to help design experimental diets to increase the level of the desired CLA isomers in dairy fats.
Abstract: Conjugated linoleic acids (CLA) are octadecadienoic acids (18:2) that have a conjugated double-bond system. Interest in these compounds has expanded since CLA were found to be associated with a number of physiological and pathological responses such as cancer, metastases, atherosclerosis, diabetes, immunity, and body fat/protein composition. The main sources of these conjugated fatty acids are dairy fats. Rumen bacteria convert polyunsaturated fatty acids, especially linoleic and linolenic acids, to CLA and numerous trans- containing mono- and diunsaturated fatty acids. It has been established that an additional route of CLA synthesis in ruminants and monogastric animals, including humans, occurs via delta9 desaturation of the trans-18:1 isomers. To date, a total of 6 positional CLA isomers have been found in dairy fats, each occurring in 4 geometric forms (cis,trans; trans,cis; cis,cis; and trans,trans) for a total of 24. All of these CLA isomers can be resolved only by a combination of gas chromatography (GC), using 100 m highly polar capillary columns, and silver-ion liquid chromatography, using 3 of these 25 cm columns in series. Complete analysis of all the trans-18:1 isomers requires prior isolation of trans monoenes by silver-ion thin-layer chromatography (TLC), followed by GC analysis using the same 100 m capillary columns operated at low temperatures starting from 120 degrees C. These analytical techniques are required to assess the purity of commercial CLA preparations, because their purity will affect the interpretation of any physiological and/or biochemical response obtained. Prior assessment of CLA preparations by TLC is also recommended to determine the presence of any other impurities. The availability of pure CLA isomers will permit the evaluation and analysis of individual CLA isomers for their nutritional and biological activity in model systems, animals, and humans. These techniques are also essential to evaluate dairy fats for their content of specific CLA isomers and to help design experimental diets to increase the level of the desired CLA isomers in dairy fats. These improved techniques are further required to evaluate the CLA profile in monogastric animals fed commercial CLA preparations for CLA enrichment of animal products. This is particularly important because absorption and metabolism will alter the ingested-CLA profile in the animal fed.

Journal ArticleDOI
TL;DR: Molecular epidemiology has suggested that cattle are not as significant a reservoir for human infections as was once believed, and molecular tools have shown that humans can be infected with zoonotic C. parvum, as well as anthroponotic Cryptosporidium hominis.

Journal ArticleDOI
TL;DR: Emission of 368.4 kg C Mg(-1) (CO2-C equivalent) was greater than the initial TC content of SBM, raising the question of the net benefits of composting on C sequestration.
Abstract: Carbon and N losses reduce the agronomic value of compost and contribute to greenhouse gas (GHG) emissions. This study investigated GHG emissions during composting of straw-bedded manure (SBM) and wood chip-bedded manure (WBM). For SBM, dry matter (DM) loss was 301 kg Mg -1 , total carbon (TC) loss was 174 kg Mg -1 , and total nitrogen (TN) loss was 8.3 kg Mg -1 . These correspond to 30.1% of initial DM, 52.8% of initial TC, and 41.6% of initial TN. For WBM, DM loss was 268 kg Mg -1, TC loss was 154 kg Mg -1 , and TN loss was 1.40 kg Mg -1 , corresponding to 26.5, 34.5, and 11.8% of initial amounts. Most C was lost as CO 2 with CH 4 accounting for <6%. However, the net contribution to greenhouse gas emissions was greater for CH, since it is 21 times more effective at trapping heat than CO 2 . Nitrous oxide (N 2 O) emissions were 0.077 kg N Mg -1 for SBM and 0.084 kg N Mg -1 for WBM, accounting for 1 to 6% of total N loss. Total GHG emissions as CO 2 -C equivalent were not significantly different between SBM (368.4 ± 18.5 kg Mg -1) and WBM (349.2 ± 24.3 kg Mg -1 ). However, emission of 368.4 kg C Mg -1 (CO 2 -C equivalent) was greater than the initial TC content (330.5 kg Mg -1 ) of SBM, raising the question of the net benefits of composting on C sequestration. Further study is needed to evaluate the impact of composting on overall GHG emissions and C sequestration and to fully investigate livestock manure management options.

Journal ArticleDOI
TL;DR: It is determined that steviol UGTs behave in a regioselective manner and propose a modified pathway for the synthesis of rebaudioside A from steviola, and an in vitro glucosyltransferase activity enzyme assay was conducted.
Abstract: Stevia rebaudiana leaves accumulate a mixture of at least eight different steviol glycosides. The pattern of glycosylation heavily influences the taste perception of these intensely sweet compounds. The majority of the glycosides are formed by four glucosylation reactions that start with steviol and end with rebaudioside A. The steps involve the addition of glucose to the C-13 hydroxyl of steviol, the transfer of glucose to the C-2' and C-3' of the 13-O-glucose and the addition of glucose to the hydroxyl of the C-4 carboxyl group. We used our collection of ESTs, an UDP-glucosyltransferase (UGT)-specific electronic probe and key word searches to identify candidate genes resident in our collection. Fifty-four expressed sequence tags (ESTs) belonging to 17 clusters were found using this procedure. We isolated full length cDNAs for 12 of the UGTs, cloned them into an expression vector, and produced recombinant enzymes in Escherichia coli. An in vitro glucosyltransferase activity enzyme assay was conducted using quercetin, kaempferol, steviol, steviolmonoside, steviolbioside, and stevioside as sugar acceptors, and (14)C-UDP-glucose as the donor. Thin layer chromatography was used to separate the products and three of the recombinant enzymes produced labelled products that co-migrated with known standards. HPLC and LC-ES/MS were then used to further define those reaction products. We determined that steviol UGTs behave in a regioselective manner and propose a modified pathway for the synthesis of rebaudioside A from steviol.

Journal ArticleDOI
TL;DR: It was determined that the ester with the most potential for being an additive or a substitute for diesel fuel is the canola methyl ester, whose physical and chemical characteristics are similar to diesel fuel.

Journal ArticleDOI
TL;DR: It is confirmed that human subjects have the capacity to metabolise cyanidin 3-glycosides, as at least ten individual anthocyanin metabolites in the urine and serum, and these metabolic products are likely in part responsible for the reported health benefits associated with the consumption of Anthocyanins.
Abstract: In the present study we investigated the metabolic conversion of cyanidin glycosides in human subjects using solid-phase extraction,HPLC-diode array detector, MS, GC, and enzymic techniques. Volunteers consumed approximately 20 g chokeberry extract containing 1.3 g cyanidin 3-glycosides (899 mg cyanidin 3-galactoside, 321 mg cyanidin 3-arabinoside, 51 mg cyanidin 3-xyloside and 50 mg cyanidin 3-glucoside). Blood samples were drawn at 0, 0.5, 1, and 2 h post-consumption of the extract. Urine samples were also collected at 0, 4-5,and 22-24h. We have confirmed that human subjects have the capacity to metabolise cyanidin 3-glycosides, as we observed at least ten individual anthocyanin metabolites in the urine and serum. Average concentrations of anthocyanins and anthocyanin metabolites in the urine reached levels of 17.9 (range 14.9-20.9) l.mol/l within 5 h post-consumption and persisted in 24h urine samples at levels of 12.1 (range 11.1-13.0) nmol/l. In addition, average total levels of anthocyanins and anthocyanin metabolites detected in the serum were observed at 5917 (range 197.3-986.1) nmol/ within 2h post-consumption. Cyanidin 3-galactoside accounted for 55.4% (9.9(range 7-2-12-6) l.mol/) and 66.0% (390.6 (range 119.4-661-9) nmol V) of the detected anthocyanins in the urine and serum samples,respectively. The metabolites were identified as glucuronide conjugates, as well as methylated and oxidised derivatives of cyanidin 3-galactoside and cyanidin glucuronide. Conjugation probably affects the biological activity of anthocyanins and these metabolic products are likely in part responsible for the reported health benefits associated with the consumption of anthocyanins.

Journal ArticleDOI
05 Jan 2004-Catena
TL;DR: In this article, the authors developed and validated a soil erosion-predicting model based on the revised Universal Soil Loss Equation (RUSLE) in a geographic information systems (GIS) environment.
Abstract: The Three Gorge Project (TGP) of China necessitates the resettlement of over 1 million population (mostly farmers) to more rugged and isolated areas than their original settlements. Soil erosion is a serious environmental and production problem in this area. To decrease the risk on environmental impacts, there is an increasing demand for sound, and readily applicable techniques for soil conservation planning in the Three Gorge Areas (TGA). The objectives of the study were to develop and validate a soil erosion-predicting model based on the revised Universal Soil Loss Equation (RUSLE) in a geographic information systems (GIS) environment. The use of GIS to develop conservation-oriented watershed management strategies in the Wangjiaqiao watershed is presented. Data used for the RUSLE were either determined or taken from published literature pertaining to the Wangjiaqiao watershed. In combination with IDRISI, GIS software (Eastman, R.J., 1997. IDRISI for Windows: User's guide (Version 2.0). Clark University, Graduate School of Geography, Worcester, MA, Chapters 4–17) was used to evaluate different agricultural management strategies in terms of predicted soil loss in the watershed. This model allowed for easy assessment of soil erosion hazards under different crop and land management options over the entire watershed. The study revealed that the annual average soil loss rate from relatively flat agricultural land was approximately 26 t/ha, whereas 52 t/ha was found on the cultivated sloping lands, which constitutes a large proportion of soil loss in the watershed. In the watershed, approximately 38 ha of agricultural land had slopes >47% (25°) and should be reforested or returned to pasture. Contour tillage (CT) and contour farming with a seasonal no-till ridge (CTN) were most effective in reducing soil loss rates. If CT and CTN were implemented, approximately 31% and 70%, respectively, of the areas with soil loss > T EP would be reduced to T EP . T EP is soil loss tolerance for economic planning and was set at ≤10 t/ha year. In addition to soil loss reduction, the CTN has the potential to increase crop yield. Soil erosion hazards may be alleviated in over 91% of the agricultural lands if combined conservation measures including terraces, CTN, CT, and crop rotations were implemented in the watershed. The results of the study indicate that the RUSLE-GIS model is a useful tool for resource management and soil conservation planning. This technology is readily transferable and accessible to other land managers and agronomists in the TGA.

Journal ArticleDOI
TL;DR: The first record of L. wingfieldii associated with the introduced and damaging pine shoot beetle T. piniperda in North America shows that the fungus is well established and can become associated with other native bark beetles that attack stressed and/or dying trees.

Journal ArticleDOI
TL;DR: In this article, the design and operation along with verifying measurements of a harmonic radar transceiver, or tag, developed for insect tracking are presented, where a short length of wire formed the antenna while a beam lead Schottky diode across a resonant loop formed the frequency doubler circuit.
Abstract: The design and operation along with verifying measurements of a harmonic radar transceiver, or tag, developed for insect tracking are presented. A short length of wire formed the antenna while a beam lead Schottky diode across a resonant loop formed the frequency doubler circuit yielding a total tag mass of less than 3 mg. Simulators using the method-of-moments for the antenna, finite-integral time-domain for the loop, and harmonic balance for the nonlinear diode element were used to predict and optimize the transceiver performance. This performance is compared to the ideal case and to measurements performed using a pulsed magnetron source within an anechoic chamber. A method for analysis of the tag is presented and used to optimize the design by creating the largest possible return signal at the second harmonic frequency for a particular incident power density. These methods were verified through measurement of tags both in isolation and mounted on insects. For excitation at 9.41 GHz the optimum tag in isolation had an antenna length of 12 mm with a loop diameter of 1 mm which yielded a harmonic cross-section of 40 mm/sup 2/. For tags mounted on Colorado potato beetles, optimum performance was achieved with an 8 mm dipole fed 2 mm from the beetle attached end. A theory is developed that describes harmonic radar in a fashion similar to the conventional radar range equation but with harmonic cross-section replacing the conventional radar cross-section. This method provides a straightforward description of harmonic radar system performance as well as provides a means to describe harmonic radar tag performance.

Journal ArticleDOI
TL;DR: The patterns of gene expression observed in soybean and P. sojae support the hypothesis that the pathogen transits from biotrophy to necrotrophy between 12 and 24 h after infection, showing that it is possible to use a single microarray to simultaneously probe gene expression in two interacting organisms.
Abstract: To investigate patterns of gene expression in soybean (Glycine max) and Phytophthora sojae during an infection time course, we constructed a 4,896-gene microarray of host and pathogen cDNA transcripts. Analysis of rRNA from soybean and P. sojae was used to estimate the ratio of host and pathogen RNA present in mixed samples. Large changes in this ratio occurred between 12 and 24 h after infection, reflecting the rapid growth and proliferation of the pathogen within host tissues. From the microarray analysis, soybean genes that were identified as strongly upregulated during infection included those encoding enzymes of phytoalexin biosynthesis and defense and pathogenesis-related proteins. Expression of these genes generally peaked at 24 h after infection. Selected lipoxygenases and peroxidases were among the most strongly downregulated soybean genes during the course of infection. The number of pathogen genes expressed during infection reached a maximum at 24 h. The results show that it is possible to use a single microarray to simultaneously probe gene expression in two interacting organisms. The patterns of gene expression we observed in soybean and P. sojae support the hypothesis that the pathogen transits from biotrophy to necrotrophy between 12 and 24 h after infection.

Journal ArticleDOI
TL;DR: The dominant structure of Krueo Ma Noy pectin was established as a 1,4-linked α-d -galacturonan by a combination of carboxyl reduction and methylation analysis, and confirmed by FT-IR spectroscopy.

Journal ArticleDOI
TL;DR: Oat phenolics, including avenanthramides, are bioavailable in hamsters and interact synergistically with vitamin C to protect LDL during oxidation and are determined in vitro to protect human LDL against oxidation induced by Cu(2+).
Abstract: The intake of phenolic acids and related polyphenolic compounds has been inversely associated with the risk of heart disease, but limited information is available about their bioavailability or mechanisms of action. Polyphenolics, principally avenanthramides, and simple phenolic acids in oat bran phenol-rich powder were dissolved in HCl:H2O:methanol (1:19:80) and characterized by HPLC with electrochemical detection. The bioavail- ability of these oat phenolics was examined in BioF1B hamsters. Hamsters were gavaged with saline containing 0.25 g oat bran phenol-rich powder (40 mol phenolics), and blood was collected between 20 and 120 min. Peak plasma concentrations of avenanthramides A and B, p-coumaric, p-hydroxybenzoic, vanillic, ferulic, sinapic, and syringic acids appeared at 40 min. Although absorbed oat phenolics did not enhance ex vivo resistance of LDL to Cu 2 -induced oxidation, in vitro addition of ascorbic acid synergistically extended the lag time of the 60-min sample from 137 to 216 min (P 0.05), unmasking the bioactivity of the oat phenolics from the oral dose. The antioxidant capability of oat phenolics to protect human LDL against oxidation induced by 10 mol/L Cu 2 was also determined in vitro. Oat phenolics from 0.52 to 1.95 mol/L increased the lag time to LDL oxidation in a dose-dependent manner (P 0.0001). Combining the oat phenolics with 5 mol/L ascorbic acid extended the lag time in a synergistic fashion (P 0.005). Thus, oat phenolics, including avenanthramides, are bioavailable in hamsters and interact synergistically with vitamin C to protect LDL during oxidation. J. Nutr. 134: 1459 -1466, 2004.

Journal ArticleDOI
TL;DR: These phenotypic relationships indicate that, compared with other measures of energetic efficiency, RFI should have a greater potential to improve overall production efficiency and PEG above maintenance, and lead to minimal correlated changes in carcass merit without altering the growth and body size of different animals.
Abstract: Residual feed intake (RFI) has been proposed as an index for determining beef cattle energetic efficiency. Although the relationship of RFI with feed conversion ratio (FCR) is well established, little is known about how RFI compares to other measures of efficiency. This study examined the phenotypic relationships among different measures of energetic efficiency with growth, feed intake, and ultrasound and carcass merit of hybrid cattle (n = 150). Dry matter intake, ME intake (MEI), ADG, metabolic weight (MWT), and FCR during the test averaged 10.29 kg/d (SD = 1.62), 1,185.45 kJ/(kg0.75·d) (SD = 114.69), 1.42 kg/d (SD = 0.25), 86.67 kg (SD = 10.21), and 7.27 kg of DM/kg of gain (SD = 1.00), respectively. Residual feed intake averaged 0.00 kg/d and ranged from -2.25 kg/d (most efficient) to 2.61 kg/d (least efficient). Dry matter intake (r = 0.75), MEI (r = 0.83), and FCR (r = 0.62) were correlated with RFI (P 0.5 SD) RFI vs. those with medium (± 0.5 SD) or low (<0.5 SD) RFI (P < 0.001). Partial efficiency of growth (PEG; energetic efficiency for ADG) was correlated with RFI (r = -0.89, P < 0.001) and was lower (P < 0.001) for high- vs. medium- or low-RFI animals. However, RFI was not related to ADG (r = -0.03), MWT (r = -0.02), relative growth rate (RGR; growth relative to instantaneous body size; r = -0.04), or Kleiber ratio (KR; ADG per unit of MWT; r = -0.004). Also, DMI was correlated (P < 0.01) with ADG (r = 0.66), MWT (r = 0.49), FCR (r = 0.49), PEG (r = -0.52), RGR (r = 0.18), and KR (r = 0.36). Additionally, FCR was correlated (P < 0.001) with ADG (r = -0.63), PEG (r = -0.83), RGR (r = -0.75), and KR (r = -0.73), but not with MWT (r = 0.07). Correlations of measures of efficiency with ultrasound or carcass traits generally were not different from zero except for correlations of RFI, FCR, and PEG, respectively, with backfat gain (r = 0.30, 0.20, and -0.30), ultrasound backfat (r = 0.19, 0.21, and -0.25), grade fat (r = 0.25, 0.19, and -0.27), lean meat yield (r = -0.22, -0.18, and 0.24), and yield grade (r = 0.28, 0.24, and -0.25). These phenotypic relationships indicate that, compared with other measures of energetic efficiency, RFI should have a greater potential to improve overall production efficiency and PEG above maintenance, and lead to minimal correlated changes in carcass merit without altering the growth and body size of different animals.

Journal ArticleDOI
TL;DR: Improved techniques are used to evaluate the CLA profile in pork products from pigs fed different commercial CLA mixtures, and are essential to evaluate dairy fats for their CLA content, to design experimental diets to increase the amount of CLA in dairy fats, and to determine theCLA profile in these CLA-enriched dairy fats.

Journal ArticleDOI
TL;DR: In this article, a technology was developed to increase resistant starch content of corn starch using esterification with citric acid at elevated temperature, and the results showed that citrate substitution changes granule properties.
Abstract: Resistant starch has drawn broad interest for both potential health benefits and functional properties. In this study, a technology was developed to increase resistant starch content of corn starch using esterification with citric acid at elevated temperature. Waxy corn, normal corn and high-amylose corn starches were used as model starches. Citric acid (40% of starch dry weight) was reacted with corn starch at different temperatures (120–150°C) for different reaction times (3–9 h). The effect of reaction conditions on resistant starch content in the citrate corn starch was investigated. When conducting the reaction at 140°C for 7 h, the highest resistant starch content was found in waxy corn citrate starch (87.5%) with the highest degree of substitution (DS, 0.16) of all starches. High-amylose corn starch had 86.4% resistant starch content and 0.14 DS, and normal corn starch had 78.8% resistant starch and 0.12 DS. The physicochemical properties of these citrate starches were characterized using various analytical techniques. In the presence of excess water upon heating, citrate starch made from waxy corn starch had no peak in the DSC thermogram, and small peaks were found for normal corn starch (0.4 J/g) and Hylon VII starch (3.0 J/g) in the thermograms. This indicates that citrate substitution changes granule properties. There are no retrogradation peaks in the thermograms when starch was reheated after 2 weeks storage at 5°C. All the citrate starches showed no peaks in RVA pasting curves, indicating citrate substitution changes the pasting properties of corn starch as well. Moreover, citrate starch from waxy corn is more thermally stable than the other citrate starches.

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TL;DR: VvVal and VvGerD cDNA probes revealed strong signals in Northern hybridizations with RNA isolated from grapevine flower buds, and transcripts hybridizing with VvVal appeared during late ripening of the berries.

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TL;DR: Evidence is provided for the potential anti-inflammatory and antiatherogenic effects of antioxidant avenanthramides present in oats, which had no toxicity to HAEC as tested up to 40 ng/ml.