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Showing papers by "Ames Research Center published in 2002"


Journal ArticleDOI
TL;DR: In this paper, the equilibrium position, adsorption energy, charge transfer, and electronic band structures of single-walled carbon nanotubes (SWNTs) and bundles were obtained for different kinds of SWNTs.
Abstract: We studied various gas molecules (NO2, O2, NH3, N2, CO2, CH4, H2O, H2, Ar) on single-walled carbon nanotubes (SWNTs) and bundles using first principles methods. The equilibrium position, adsorption energy, charge transfer, and electronic band structures are obtained for different kinds of SWNTs. Most molecules adsorb weakly on SWNTs and can be either charge donors or acceptors to the nanotubes. We find that the gas adsorption on the bundle interstitial and groove sites is stronger than that on individual nanotubes. The electronic properties of SWNTs are sensitive to the adsorption of certain gases such as NO2 and O2. Charge transfer and gas-induced charge fluctuation might significantly affect the transport properties of SWNTs. Our theoretical results are consistent with recent experiments.

1,107 citations


Journal ArticleDOI
TL;DR: The theoretical description of the kernel PLS algorithm is given and the algorithm is experimentally compared with the existing kernel PCR and kernel ridge regression techniques to demonstrate that on the data sets employed Kernel PLS achieves the same results as kernel PCR but uses significantly fewer, qualitatively different components.
Abstract: A family of regularized least squares regression models in a Reproducing Kernel Hilbert Space is extended by the kernel partial least squares (PLS) regression model. Similar to principal components regression (PCR), PLS is a method based on the projection of input (explanatory) variables to the latent variables (components). However, in contrast to PCR, PLS creates the components by modeling the relationship between input and output variables while maintaining most of the information in the input variables. PLS is useful in situations where the number of explanatory variables exceeds the number of observations and/or a high level of multicollinearity among those variables is assumed. Motivated by this fact we will provide a kernel PLS algorithm for construction of nonlinear regression models in possibly high-dimensional feature spaces.We give the theoretical description of the kernel PLS algorithm and we experimentally compare the algorithm with the existing kernel PCR and kernel ridge regression techniques. We will demonstrate that on the data sets employed kernel PLS achieves the same results as kernel PCR but uses significantly fewer, qualitatively different components.

898 citations


Journal ArticleDOI
TL;DR: This review includes a history of the technique, a brief comparison with spaceflight data, technical details, extension of the model to mice, and other important technical considerations (e.g., housing, room temperature, unloading angle, the potential need for multiple control groups, age, body weight, the use of the forelimb tissues as internal controls, and when to remove animals from experiments).
Abstract: Since its inception at the National Aeronautics and Space Administration (NASA) Ames Research Center in the mid-1970s, many laboratories around the world have used the rat hindlimb unloading model to simulate weightlessness and to study various aspects of musculoskeletal loading. In this model, the hindlimbs of rodents are elevated to produce a 30 degrees head-down tilt, which results in a cephalad fluid shift and avoids weightbearing by the hindquarters. Although several reviews have described scientific results obtained with this model, this is the first review to focus on the technical aspects of hindlimb unloading. This review includes a history of the technique, a brief comparison with spaceflight data, technical details, extension of the model to mice, and other important technical considerations (e.g., housing, room temperature, unloading angle, the potential need for multiple control groups, age, body weight, the use of the forelimb tissues as internal controls, and when to remove animals from experiments). This paper is intended as a reference for researchers, reviewers of manuscripts, and institutional animal care and use committees. Over 800 references, related to the hindlimb unloading model, can be accessed via the electronic version of this article.

837 citations


Journal ArticleDOI
TL;DR: The authors used a climate-driven regression model to develop spatially resolved estimates of soil-CO2 emissions from the terrestrial land surface for each month from January 1980 to December 1994, to evaluate the effects of interannual variations in climate on global soil-to-atmosphere CO2 fluxes.
Abstract: We used a climate-driven regression model to develop spatially resolved estimates of soil-CO2 emissions from the terrestrial land surface for each month from January 1980 to December 1994, to evaluate the effects of interannual variations in climate on global soil-to-atmosphere CO2 fluxes. The mean annual global soil-CO2 flux over this 15-y period was estimated to be 80.4 (range 79.3–81.8) Pg C. Monthly variations in global soil-CO2 emissions followed closely the mean temperature cycle of the Northern Hemisphere. Globally, soil-CO2 emissions reached their minima in February and peaked in July and August. Tropical and subtropical evergreen broad-leaved forests contributed more soil-derived CO2 to the atmosphere than did any other vegetation type (∼30% of the total) and exhibited a biannual cycle in their emissions. Soil-CO2 emissions in other biomes exhibited a single annual cycle that paralleled the seasonal temperature cycle. Interannual variability in estimated global soil-CO2 production is substantially less than is variability in net carbon uptake by plants (i.e., net primary productivity). Thus, soils appear to buffer atmospheric CO2 concentrations against far more dramatic seasonal and interannual differences in plant growth. Within seasonally dry biomes (savannas, bushlands and deserts), interannual variability in soil-CO2 emissions correlated significantly with interannual differences in precipitation. At the global scale, however, annual soil-CO2 fluxes correlated with mean annual temperature, with a slope of 3.3 Pg C y−1 per °C. Although the distribution of precipitation influences seasonal and spatial patterns of soil-CO2 emissions, global warming is likely to stimulate CO2 emissions from soils.

702 citations


Journal ArticleDOI
28 Mar 2002-Nature
TL;DR: A laboratory demonstration that glycine, alanine and serine naturally form from ultraviolet photolysis of the analogues of icy interstellar grains is reported, suggesting that at least some meteoritic amino acids are the result of interstellar photochemistry, rather than formation in liquid water on an early Solar System body.
Abstract: The delivery of extraterrestrial organic molecules to Earth by meteorites may have been important for the origin and early evolution of life. Indigenous amino acids have been found in meteorites-over 70 in the Murchison meteorite alone. Although it has been generally accepted that the meteoritic amino acids formed in liquid water on a parent body, the water in the Murchison meteorite is depleted in deuterium relative to the indigenous organic acids. Moreover, the meteoritical evidence for an excess of laevo-rotatory amino acids is hard to understand in the context of liquid-water reactions on meteorite parent bodies. Here we report a laboratory demonstration that glycine, alanine and serine naturally form from ultraviolet photolysis of the analogues of icy interstellar grains. Such amino acids would naturally have a deuterium excess similar to that seen in interstellar molecular clouds, and the formation process could also result in enantiomeric excesses if the incident radiation is circularly polarized. These results suggest that at least some meteoritic amino acids are the result of interstellar photochemistry, rather than formation in liquid water on an early Solar System body.

686 citations


Journal ArticleDOI
TL;DR: In this paper, the authors identify the influence of observational scale on statistical results as a subset of what geographers call the Modifiable Area Unit Problem (MAUP), and recommend a set of considerations for sampling design to allow useful tests for specific scales of a phenomenon under study.
Abstract: Concepts of spatial scale, such as extent, grain, resolution, range, footprint, support and cartographic ratio are not interchangeable. Because of the potential confusion among the definitions of these terms, we suggest that authors avoid the term "scale" and instead refer to specific concepts. In particular, we are careful to discriminate between observation scales, scales of ecological phenomena and scales used in spatial statistical analysis. When scales of observation or analysis change, that is, when the unit size, shape, spacing or extent are altered, statistical results are expected to change. The kinds of results that may change include estimates of the population mean and variance, the strength and character of spatial autocorrelation and spatial anisotropy, patch and gap sizes and multivariate relationships, The First three of these results (precision of the mean, variance and spatial autocorrelation) can sometimes be estimated using geostatistical support-effect models. We present four case studies of organism abundance and cover illustrating some of these changes and how conclusions about ecological phenomena (process and structure) may be affected. We identify the influence of observational scale on statistical results as a subset of what geographers call the Modifiable Area Unit Problem (MAUP). The way to avoid the MAUP is by careful construction of sampling design and analysis. We recommend a set of considerations for sampling design to allow useful tests for specific scales of a phenomenon under study. We further recommend that ecological studies completely report all components of observation and analysis scales to increase the possibility of cross-study comparisons.

653 citations


Journal ArticleDOI
TL;DR: It is found that both the mid-IR and the visible to near-IR wavelength ranges offer valuable information regarding biosignatures and planetary properties; therefore both merit serious scientific consideration for TPF and Darwin.
Abstract: The major goals of NASA's Terrestrial Planet Finder (TPF) and the European Space Agency's Darwin missions are to detect terrestrial-sized extrasolar planets directly and to seek spectroscopic evidence of habitable conditions and life. Here we recommend wavelength ranges and spectral features for these missions. We assess known spectroscopic molecular band features of Earth, Venus, and Mars in the context of putative extrasolar analogs. The preferred wavelength ranges are 7-25 μm in the mid-IR and 0.5 to ~1.1 μm in the visible to near-IR. Detection of O2 or its photolytic product O3 merits highest priority. Liquid H2O is not a bioindicator, but it is considered essential to life. Substantial CO2 indicates an atmosphere and oxidation state typical of a terrestrial planet. Abundant CH4 might require a biological source, yet abundant CH4 also can arise from a crust and upper mantle more reduced than that of Earth. The range of characteristics of extrasolar rocky planets might far exceed that of the Solar Syst...

544 citations


Journal ArticleDOI
TL;DR: In this article, the authors presented 6-9 mum spectra of a sample of reflection nebulae, HII regions, YSOs, evolved stars and galaxies that show strong unidentified infrared bands, obtained with the SWS spectrograph on board ISO.
Abstract: IR spectroscopy provides a valuable tool for the characterisation and identification of interstellar molecular species. Here, we present 6-9 mum spectra of a sample of reflection nebulae, HII regions, YSOs, evolved stars and galaxies that show strong unidentified infrared bands, obtained with the SWS spectrograph on board ISO. The IR emission features in this wavelength region show pronounced variations. 1) The 6.2 mum feature shifts from 6.22 to 6.3 mum and clearly shows profile variations. 2) The 7.7 mum complex is comprised of at least two subpeaks peaking at 7.6 and one longwards of 7.7 mum. In some cases the main peak can apparently shift up to 8 mum. Two sources do not exhibit a 7.7 mum complex but instead show a broad emission feature at 8.22 mum. 3) The 8.6 mum feature has a symmetric profile in all sources and some sources exhibit this band at slightly longer wavelengths. For the 6.2, 7.7 and 8.6 mum features, the sources have been classified independently based on their profile and peak position. The classes derived for these features are directly linked with each other. Sources with a 6.2 mum feature peaking at similar to6.22 mum exhibit a 7.7 mum complex dominated by the 7.6 mum component. In contrast, sources with a 6.2 mum profile peaking longwards of 6.24 mum show a 7.7 mum complex with a dominant peak longwards of 7.7 mum and a 8.6 mum feature shifted toward the red. Furthermore, the observed 6-9 mum spectrum depends on the type of object. All ISM-like sources and a few PNe and Post-AGB stars belong to the first group while isolated Herbig AeBe stars, a few Post-AGB stars and most PNe belong to the second group. We summarise existing laboratory data and theoretical quantum chemical calculations of the modes emitting in this wavelength region of PAH molecules. We discuss the variations in peak position and profile in view of the exact nature of the carrier. We attribute the observed 6.2 mum profile and peak position to the combined effect of a PAH family and anharmonicity with pure PAHs representing the 6.3 mum component and substituted/complexed PAHs representing the 6.2 mum component. The 7.6 mum component is well reproduced by both pure and substituted/complexed PAHs but the 7.8 mum component remains an enigma. In addition, the exact identification of the 8.22 mum feature remains unknown. The observed variations in the characteristics of the IR emission bands are linked to the local physical conditions. Possible formation and evolution processes that may influence the interstellar PAH class are highlighted.

543 citations


Journal ArticleDOI
TL;DR: In this paper, the authors presented a network of seven valley floor automatic meteorological stations during the period 1986 to 2000, with mean annual temperatures ranging from −14.8°C to −30.0°C, depending on the site and period of measurement.
Abstract: [1] Climate observations from the McMurdo dry valleys, East Antarctica are presented from a network of seven valley floor automatic meteorological stations during the period 1986 to 2000. Mean annual temperatures ranged from −14.8°C to −30.0°C, depending on the site and period of measurement. Mean annual relative humidity is generally highest near the coast. Mean annual wind speed increases with proximity to the polar plateau. Site-to-site variation in mean annual solar flux and PAR is due to exposure of each station and changes over time are likely related to changes in cloudiness. During the nonsummer months, strong katabatic winds are frequent at some sites and infrequent at others, creating large variation in mean annual temperature owing to the warming effect of the winds. Katabatic wind exposure appears to be controlled to a large degree by the presence of colder air in the region that collects at low points and keeps the warm less dense katabatic flow from the ground. The strong influence of katabatic winds makes prediction of relative mean annual temperature based on geographical position (elevation and distance from the coast) alone, not possible. During the summer months, onshore winds dominate and warm as they progress through the valleys creating a strong linear relationship (r2 = 0.992) of increasing potential temperature with distance from the coast (0.09°C km−1). In contrast to mean annual temperature, summer temperature lends itself quite well to model predictions, and is used to construct a statistical model for predicting summer dry valley temperatures at unmonitored sites.

470 citations


Journal ArticleDOI
31 Jan 2002-Nature
TL;DR: Data from the dry valleys are presented representing evidence of rapid terrestrial ecosystem response to climate cooling in Antarctica, including decreased primary productivity of lakes and declining numbers of soil invertebrates, which poses challenges to models of climate and ecosystem change.
Abstract: The average air temperature at the Earth's surface has increased by 0.06 °C per decade during the 20th century1, and by 0.19 °C per decade from 1979 to 19982. Climate models generally predict amplified warming in polar regions3,4, as observed in Antarctica's peninsula region over the second half of the 20th century5,6,7,8,9. Although previous reports suggest slight recent continental warming9,10, our spatial analysis of Antarctic meteorological data demonstrates a net cooling on the Antarctic continent between 1966 and 2000, particularly during summer and autumn. The McMurdo Dry Valleys have cooled by 0.7 °C per decade between 1986 and 2000, with similar pronounced seasonal trends. Summer cooling is particularly important to Antarctic terrestrial ecosystems that are poised at the interface of ice and water. Here we present data from the dry valleys representing evidence of rapid terrestrial ecosystem response to climate cooling in Antarctica, including decreased primary productivity of lakes (6–9% per year) and declining numbers of soil invertebrates (more than 10% per year). Continental Antarctic cooling, especially the seasonality of cooling, poses challenges to models of climate and ecosystem change.

451 citations


Book ChapterDOI
01 Jan 2002
TL;DR: This paper reviews the supervised learning versions of the no-free-lunch theorems in a simplified form, and discusses the significance of those theoresms, and their relation to other aspects of supervised learning.
Abstract: This paper reviews the supervised learning versions of the no-free-lunch theorems in a simplified form It also discusses the significance of those theorems, and their relation to other aspects of supervised learning

Journal ArticleDOI
TL;DR: Advice to ecologists with limited experience in spatial analysis is to use simple visualization techniques for initial analysis, and subsequently to select methods that are appropriate for the data type and that answer their specific questions of interest.
Abstract: This paper aims to provide guidance to ecologists with limited experience in spatial analysis to help in their choice of techniques. It uses examples to compare methods of spatial analysis for ecological field data. A taxonomy of different data types is presented, including point- and area-referenced data, with and without attributes. Spatially and non-spatially explicit data are distinguished. The effects of sampling and other transformations that convert one data type to another are discussed; the possible loss of spatial information is considered. Techniques for analyzing spatial pattern, developed in plant ecology, animal ecology, landscape ecology, geostatistics and applied statistics are reviewed briefly and their overlap in methodology and philosophy noted. The techniques are categorized according to their output and the inferences that may be drawn from them, in a discursive style without formulae. Methods are compared for four case studies with field data covering a range of types. These are: 1) percentage cover of three shrubs along a line transect; 2) locations and volume of a desert plant in a 1 ha area; 3) a remotely-sensed spectral index and elevation from 105 km2 of a mountainous region; and 4) land cover from three rangeland types within 800 km2 of a coastal region. Initial approaches utilize mapping, frequency distributions and variance-mean indices. Analysis techniques we compare include: local quadrat variance, block quadrat variance, correlograms, variograms, angular correlation, directional variograms, wavelets, SADIE, nearest neighbour methods, Ripley's (t), and various landscape ecology metrics. Our advice to ecologists is to use simple visualization techniques for initial analysis, and subsequently to select methods that are appropriate for the data type and that answer their specific questions of interest. It is usually prudent to employ several different techniques.

Journal ArticleDOI
TL;DR: Energy balance analysis (EBA) is introduced--the theory and methodology for enforcing the laws of thermodynamics in such simulations--making the results more physically realistic and revealing greater insight into the regulatory and control mechanisms operating in complex large-scale systems.

Journal ArticleDOI
TL;DR: In this paper, the authors present an interpretation of the i'-z' versus J-K color trends of known L and T dwarfs and find that the i'z' color is extremely sensitive to chemical equilibrium assumptions; chemical equilibrium models accounting for cloud sedimentation predict redder i' z' colors than models that neglect sedimentation.
Abstract: The optical and infrared colors of L and T dwarfs are sensitive to cloud sedimentation and chemical equilibrium processes in their atmospheres. The i'-z' versus J-K color-color diagram provides a window into diverse atmospheric processes mainly because different chemical processes govern each color, and cloud opacity largely affects J-K but not i'-z'. Using theoretical atmosphere models that include for the first time a self-consistent treatment of cloud formation, we present an interpretation of the i'-z' versus J-K color trends of known L and T dwarfs. We find that the i'-z' color is extremely sensitive to chemical equilibrium assumptions; chemical equilibrium models accounting for cloud sedimentation predict redder i'-z' colors—by up to 2 mag—than models that neglect sedimentation. We explore the previously known J-K color trends in which objects first become redder, then bluer with decreasing effective temperature. Only models that include sedimentation of condensates are able to reproduce these trends. We find that the exact track of a cooling brown dwarf in J-K (and i'-z') is very sensitive to the details of clouds, in particular to the efficiency of sedimentation of condensates in its atmosphere. We also find that clouds still affect the strength of the J-, H-, and K-band fluxes of even the coolest T dwarfs. In addition, we predict the locus in the i'-z' versus J-K color-color diagram of brown dwarfs cooler than yet discovered.

Journal ArticleDOI
TL;DR: Implicit sequence learning by the nondominant left hand was examined with the serial reaction time (SRT) task during functional brain imaging, and mirror transformation of the sequence by the right hand was associated with a marked increase in regional activity in the left motor cortex, consistent with a role for sequential transformation at this level of the motor output pathway.
Abstract: Whereas the human right hemisphere is active during execution of contralateral hand movements, the left hemisphere is engaged for both contra- and ipsilateral movements, at least for right-handed subjects. Whether this asymmetry is also found during motor learning remains unknown. Implicit sequence learning by the nondominant left hand was examined with the serial reaction time (SRT) task during functional brain imaging. As learning progressed, increases in brain activity were observed in left lateral premotor cortex (PMC) and bilaterally in supplementary motor areas (SMA), with the increase significantly greater in the left hemisphere. The left SMA site was similar to one previously identified with right-hand learning, suggesting that this region is critical for representing a sequence independent of effector. Learning with the left hand also recruited a widespread set of temporal and frontal regions, suggesting that motor skill learning with the nondominant hand develops within both cognitive and motor-related functional networks. After skill acquisition, subjects performed the SRT task with their right hands, and sequence transfer was tested with the original and a mirror-ordered sequence. With the original sequence, the stimulus sequence and series of response locations remained unchanged, but the finger movements were different. With the mirror-ordered sequence, the response sequence involved finger movements homologous to those used during training. Performance of the original and mirror sequence by the right hand was significantly better than with random stimuli. Mirror transformation of the sequence by the right hand was associated with a marked increase in regional activity in the left motor cortex, consistent with a role for sequential transformation at this level of the motor output pathway.

Journal ArticleDOI
TL;DR: In this article, an analysis of the spectrum of the diUuse interstellar medium (DISM) compared with the spectra of 13 materials produced in the laboratory which serve as analogs to the interstellar material is presented.
Abstract: This is an analysis of the 4000¨1000 cm~1 (2.5¨10 km) region of the spectrum of diUuse interstellar medium (DISM) dust compared with the spectra of 13 materials produced in the laboratory which serve as analogs to the interstellar material. The organic signatures of extragalactic dust, carbonaceous chondritic material, and E. coli bacteria are also presented because these have been discussed in the literature as relevant to the diUuse interstellar medium. Spectral analysis of the DISM allows us to place signi—cant constraints on the applicability of proposed candidate materials. The spectra of candidate materials are evaluated using four spectral characteristics based on the interstellar data: (i) comparisons of the pro—le and subpeak positions of the 2940 cm~1 (3.4 km) aliphatic CH stretching-mode band, (ii) the ratio of the optical depth (O.D.) of the aliphatic CH stretch to the O.D. of the OH stretch near 3200 cm~1 (3.1 km), (iii) the ratio of the O.D. of the aliphatic CH stretch to the O.D. of the carbonyl band near 1700 cm~1 (5.9 km), and (iv) the ratio of the O.D. of the aliphatic CH stretch feature to the O.D. of the CH deformation modes near 1470 cm~1 (6.8 km) and 1370 cm~1 (7.25 km). We conclude that the organic refractory material in the diUuse interstellar medium is predominantly hydrocarbon in nature, possessing little nitrogen or oxygen, with the carbon distributed between the aromatic and aliphatic forms. Long alkane chains with n much greater than 4 or 5 are not major constituents H 3 Cw(CH 2 ) n w of this material. Comparisons to laboratory analogs indicate the DISM organic material resembles plasma processed pure hydrocarbon residues much more so than energetically processed ice residues. This result is consistent with a birth site for the carrier of the 3.4 km band in the out—ow region of evolved carbon stars. The organic material extracted from the Murchison carbonaceous meteorite and the spectrum of E. coli bacteria reveal spectral features in the 5¨10 km region that are absent in the DISM. Although the presence of unaltered circumstellar components in the Murchison meteorite has been established through several lines of evidence, it is unclear whether or not the aliphatic component which gives rise to the 3.4 km band is in that category. Considering the complete 2¨10 km wavelength region, there is no spectral evidence for a biological origin of the 3.4 km interstellar absorption band. The similarity of the aliphatic CH stretch region of dust from our own Galaxy compared with that of distant galaxies suggests that the organic component of the ISM is widespread and may be an important universal reservoir of prebiotic organic carbon. )

Journal ArticleDOI
TL;DR: In this paper, the wavelength dependence of the absorption of solar radiation by elemental carbon [or black carbon (BC)] is explored. But the results do not indicate the magnitude of the refractive indices.
Abstract: Measurements are presented of the wavelength dependence of the aerosol absorption coefficient taken during the Tropical Aerosol Radiative Forcing Observational Experiment (TARFOX) over the northern Atlantic. The data show an approximate lamda(exp -1) variation between 0.40 and 1.0 micrometers. The theoretical basis of the wavelength variation of the absorption of solar radiation by elemental carbon [or black carbon (BC)] is explored. For a wavelength independent refractive index the small particle absorption limit simplifies to a lambda(exp -1) variation in relatively good agreement with the data. This result implies that the refractive indices of BC were relatively constant in this wavelength region, in agreement with much of the data on refractive indices of BC. However, the result does not indicate the magnitude of the refractive indices. The implications of the wavelength dependence of BC absorption for the spectral behavior of the aerosol single scattering albedo are discussed. It is shown that the single scattering albedo for a mixture of BC and nonabsorbing material decreases with wavelength in the solar spectrum (i.e., the percentage amount of absorption increases). This decease in the single scattering albedo with wavelength for black carbon mixtures is different from the increase in single scattering allied for most mineral aerosols (dusts). This indicates that, if generally true, the spectral variation of the single- scattering albedo can be used to distinguish aerosol types. It also highlights the importance of measurements of the spectral variation of the aerosol absorption coefficient and single scattering albedo.

Journal ArticleDOI
TL;DR: In this article, the authors investigated thermal expansion and diffusion properties of carbon nanotube-polyethylene composites. And they found that the addition of carbon-nanotubes to polymer matrix significantly increased the glass transition temperature.
Abstract: Classical molecular dynamics (MD) simulations employing Brenner potential for intra-nanotube interactions and van der Waals forces for polymer-nanotube interface have been used to investigate thermal expansion and diffusion characteristics of carbon nanotube-polyethylene composites. Addition of carbon nanotubes to polymer matrix is found to significantly increase the glass transition temperature Tg, and thermal expansion and diffusion coefficients in the composite above Tg. The increase has been attributed to the temperature dependent increase of the excluded volume for the polymer chains, and the findings could have implications in the composite processing, coating and painting applications.

Journal ArticleDOI
TL;DR: The framework for constructing a high-order, conservative spectral (finite) volume (SV) method is presented for two-dimensional scalar hyperbolic conservation laws on unstructured triangular grids and the convergence of the SV method is shown to depend on how a SV is partitioned.

Journal ArticleDOI
TL;DR: It is demonstrated that quantum dots can be manipulated using modified chaperonins and organized into arrays for use in next-generation electronic and photonic devices.
Abstract: Traditional methods for fabricating nanoscale arrays are usually based on lithographic techniques. Alternative new approaches rely on the use of nanoscale templates made of synthetic or biological materials. Some proteins, for example, have been used to form ordered two-dimensional arrays. Here, we fabricated nanoscale ordered arrays of metal and semiconductor quantum dots by binding preformed nanoparticles onto crystalline protein templates made from genetically engineered hollow double-ring structures called chaperonins. Using structural information as a guide, a thermostable recombinant chaperonin subunit was modified to assemble into chaperonins with either 3 nm or 9 nm apical pores surrounded by chemically reactive thiols. These engineered chaperonins were crystallized into two-dimensional templates up to 20 microm in diameter. The periodic solvent-exposed thiols within these crystalline templates were used to size-selectively bind and organize either gold (1.4, 5 or 10nm) or CdSe-ZnS semiconductor (4.5 nm) quantum dots into arrays. The order within the arrays was defined by the lattice of the underlying protein crystal. By combining the self-assembling properties of chaperonins with mutations guided by structural modelling, we demonstrate that quantum dots can be manipulated using modified chaperonins and organized into arrays for use in next-generation electronic and photonic devices.

Journal ArticleDOI
TL;DR: This paper used a priori estimates of sources and sinks to constrain a global three-dimensional atmospheric model simulation and then using atmospheric observations from 14 surface sites and 5 aircraft missions to improve these estimates through an inversion analysis.
Abstract: [1] The atmospheric budget and distribution of acetone are investigated by using a priori estimates of sources and sinks to constrain a global three-dimensional atmospheric model simulation and then using atmospheric observations from 14 surface sites and 5 aircraft missions to improve these estimates through an inversion analysis. Observations over the South Pacific imply a large photochemical marine source of acetone, either from the ocean or from marine organic aerosol. Low concentrations of acetone measured at European sites in winter-spring and in the Arctic in summer suggest a large microbial ocean sink. The summer-to-fall decrease of concentrations observed in Europe argues against a large source from plant decay. Continental observations in the tropics and at northern midlatitudes in summer imply a large source from terrestrial vegetation. Observations in the Northern Hemisphere outside summer imply a large source from atmospheric oxidation of anthropogenic isoalkanes (propane, isobutane, isopentane). Model simulation of isoalkanes and comparison to observations yields best global emission estimates of 12 Tg C yr−1 for propane (including only 0.6 Tg C yr−1 from biomass burning), 3.6 Tg C yr−1 for isobutane, and 5.0 Tg C yr−1 for isopentane. Our best estimate of the global acetone source is 95 Tg yr−1. The mean tropospheric lifetime of acetone is estimated to be 15 days. Terrestrial vegetation and oceans are the principal sources of acetone in the tropopause region (0.1–0.7 ppbv) except in the extratropical Northern Hemisphere, where oxidation of isoalkanes is more important.

Journal ArticleDOI
TL;DR: In this paper, a spin-on glass (SOG) is used to fill the gaps between CNTs with a spin on glass to provide structural support to the CNT arrays.
Abstract: A vertically aligned carbon nanotube (CNT) array is fabricated as a nanoelectrode platform for biosensor development. Prior to chemical functionalization, metal catalyst particles at the ends of CNT are removed and the closed ends are opened. We find that the oxidative treatment for generating the chemical functional groups at the opened ends of the CNT compromise the mechanical stability of the nanotubes, often leading to total collapse of the aligned CNTs. To solve this problem, we have developed a new approach for filling the gaps between CNTs with a spin-on glass (SOG). Results from the coupling of nucleic acids to the CNT arrays suggest that the SOG enhances the reactivity by providing structural support to the CNTs. The SOG also covers the length of the sidewalls of CNTs, leading to a less hydrophobic interface and thus may aid in improving the chemical reactivity.

Journal ArticleDOI
TL;DR: A risk map is constructed indicating suitable habitats within areas where I. scapularis is already established and areas of high probability the tick will become established if introduced, which has both explanatory power and predictive capability.
Abstract: The distribution and abundance of Ixodes scapularis were studied in Wisconsin, northern Illinois, and portions of the Upper Peninsula of Michigan by inspecting small mammals for ticks and by collecting questing ticks at 138 locations in state parks and natural areas. Environmental data were gathered at a local level (i.e., micro and meso levels), and a geographic information system (GIS) was used with several digitized coverages of environmental data to create a habitat profile for each site and a grid map for Wisconsin and Illinois. Results showed that the presence and abundance of I. scapularis varied, even when the host population was adequate. Tick presence was positively associated with deciduous, dry to mesic forests and alfisol-type soils of sandy or loam-sand textures overlying sedimentary rock. Tick absence was associated with grasslands, conifer forests, wet to wet/mesic forests, acidic soils of low fertility and a clay soil texture, and Precambrian bedrock. We performed a discriminant analysis to determine environmental differences between positive and negative tick sites and a regression equation to examine the probability of I. scapularis presence per grid. Both analyses indicated that soil order and land cover were the dominant contributors to tick presence. We then constructed a risk map indicating suitable habitats within areas where I. scapularis is already established. The risk map also shows areas of high probability the tick will become established if introduced. Thus, this risk analysis has both explanatory power and predictive capability.

Journal ArticleDOI
TL;DR: In this paper, an integrated aerostructural method for the design of aerospace vehicles is presented, where both aerodynamic and structural structures are represented using high-fidelity models such as the Euler equations for the aerodynamics and a detailed finite element model for the primary structure.
Abstract: This paper focuses on the demonstration of an integrated aerostructural method for the design of aerospace vehicles. Both aerodynamics and structures are represented using high-fidelity models such as the Euler equations for the aerodynamics and a detailed finite element model for the primary structure. The aerodynamic outer-mold line and a structure of fixed topology are parameterized using a large number of design variables. The aerostructural sensitivities of aerodynamic and structural cost functions with respect to both outer-mold line shape and structural variables are computed using an accurate and efficient coupled-adjoint procedure. Kreisselmeier‐ Steinhauser functions are used to reduce the number of structural constraints in the problem. Results of the aerodynamic shape and structural optimization of a natural laminar-flow supersonic business jet are presented together with an assessment of the accuracy of the sensitivity information obtained using the coupled-adjoint procedure.

Journal ArticleDOI
Jun Li1, Alan M. Cassell1, Lance Delzeit1, Jie Han1, Meyya Meyyappan1 
TL;DR: In this paper, the electrochemical study of three carbon nanotube ensemble electrodes (single-walled nanotubes, as-produced multiwalled nano-tubes towers, and heat-treated multiweled nanotubes) was carried out using cyclic voltammetry.
Abstract: We report on the electrochemical study of three carbon nanotube ensemble electrodes: single-walled nanotube paper, as-produced multiwalled nanotube towers, and heat-treated multiwalled nanotube towers Cyclic voltammetry was used in 010 M KCl containing 50 mM K4Fe(CN)6 to obtain information on both the capacitive background and electron transfer rate from the faradaic reaction of the redox species The capacitance gives insight into the effective surface area (including both the exterior surface and the interior surface within the film) as well as the “pseudocapacitance” due to faradaic reactions of surface bonded oxides We found that a large portion of the carbon nanotube surface of the as-produced multiwalled nanotube tower electrode was blocked by amorphous carbon It can be largely removed by prolonged heat treatment Among the three types of samples, the single-walled nanotube paper electrode presented the largest volume specific capacitance, consistent with its highest carbon nanotube packing de

Journal ArticleDOI
TL;DR: More than a dozen hydrocarbon seep-carbonate occurrences in late Jurassic to late Cretaceous forearc and accretionary prism strata, western California, accumulated in turbidite/fault-hosted or serpentine diapir-related settings were analyzed for their petrographic, geochemical and palaeoecological attributes, and each showed a three-stage development that recorded the evolution of fluids through reducing-oxidizing-reducing conditions.
Abstract: More than a dozen hydrocarbon seep-carbonate occurrences in late Jurassic to late Cretaceous forearc and accretionary prism strata, western California, accumulated in turbidite/fault-hosted or serpentine diapir-related settings. Three sites, Paskenta, Cold Fork of Cottonwood Creek and Wilbur Springs, were analyzed for their petrographic, geochemical and palaeoecological attributes, and each showed a three-stage development that recorded the evolution of fluids through reducing‐oxidizing‐reducing conditions. The first stage constituted diffusive, reduced fluid seepage (CH4, H2S) through seafloor sediments, as indicated by Fe-rich detrital micrite, corroded surfaces encrusted with framboidal pyrite, anhedral yellow calcite and negative cement stable isotopic signatures (d 13 C as low as � 35.5% PDB; d 18 Oa s low as � 10.8% PDB). Mega-invertebrates, adapted to reduced conditions and/or bacterial chemosymbiosis, colonized the sites during this earliest period of fluid seepage. A second, early stage of centralized venting at the seafloor followed, which was coincident with hydrocarbon migration, as evidenced by nonluminescent fibrous cements with d 13 C values as low as � 43.7% PDB, elevated d 18 O (up to þ2.3% PDB), petroleum inclusions, marine borings and lack of pyrite. Throughout these early phases of hydrocarbon seepage, microbial sediments were preserved as layered and clotted, nondetrital micrites. A final late-stage of development marked a return to reducing conditions during burial diagenesis, as implied by pore-associated Mn-rich cement phases with bright cathodoluminescent patterns, and negative d 18 O signatures (as low as � 14% PDB). These recurring patterns among sites highlight similarities in the hydrogeological evolution of the Mesozoic convergent margin of California, which influenced local geochemical conditions and organism responses. A comparison of stable carbon and oxygen isotopic data for 33 globally distributed seep-carbonates, ranging in age from Devonian to Recent, delineated three groupings that reflect variable fluid input, different tectono-sedimentary regimes and time‐temperature-dependent burial diagenesis.

Journal ArticleDOI
06 Dec 2002-Science
TL;DR: The martian valley networks formed near the end of the period of heavy bombardment of the inner solar system, about 3.5 billion years ago, and warmed the surface, keeping it above the freezing point of water for periods ranging from decades to millennia, depending on impactor size.
Abstract: The martian valley networks formed near the end of the period of heavy bombardment of the inner solar system, about 3.5 billion years ago. The largest impacts produced global blankets of very hot ejecta, ranging in thickness from meters to hundreds of meters. Our simulations indicated that the ejecta warmed the surface, keeping it above the freezing point of water for periods ranging from decades to millennia, depending on impactor size, and caused shallow subsurface or polar ice to evaporate or melt. Large impacts also injected steam into the atmosphere from the craters or from water innate to the impactors. From all sources, a typical 100-, 200-, or 250-kilometers asteroid injected about 2, 9, or 16 meters, respectively, of precipitable water into the atmosphere, which eventually rained out at a rate of about 2 meters per year. The rains from a large impact formed rivers and contributed to recharging aquifers.

Journal ArticleDOI
TL;DR: In this paper, the authors examined the capability of such missions using bolometric data for the only star for which su"cient photometric precision exists to address this question: the Sun and showed that solar-like variability does not prevent the detection of Earth-sized planets even for stars rotating significantly faster than the Sun.
Abstract: Transit photometry is a promising method for discovering extrasolar planets as small as Earth from spacebased photometers, and several near-term photometric missions are on the drawing board. In particular, NASA’s recently selected Kepler mission is devoted primarily to detecting extrasolar planets. The success of these e!o rts depends in part on the ability to detect transit signatures against the inherent photometric variability of the target stars. While other noise sources such as shot noise and CCD noise are under the control of the instrument designers, this one is not. The photometric variability of solar-like stars presents a fundamental lower limit to the minimum detectable planet radius for a given star and number of observed transits. In this paper we examine the capability of such missions using bolometric data for the only star for which su"cient photometric precision exists to address this question: the Sun. The results indicate that solar-like variability does not prevent the detection of Earth-sized planets even for stars rotating significantly faster than the Sun. Four transits are detectable for mv ! 12 stars with rotation periods as short as " 21 days, while six transitsallowdetectionforstellarrotation periods asshortas" 16days.Indeed, thelimitsposed bysolar-like variability allow for the detection of planets significantly smaller than Earth orbiting Sun-like stars. Planets as small as 0.6 Earth radii exhibitingat least sixtransits can be detected orbiting bright (mv ! 10) solar analogs. Subject headings: methods: data analysis — planetary systems — techniques: photometric

Journal ArticleDOI
TL;DR: A Newton‐Krylov algorithm is presented for the aerodynamic optimization of single and multi-element airfoil configurations and is used to compute a Pareto front for a multi-objective problem, and the results are validated using a genetic algorithm.
Abstract: A Newton‐Krylov algorithm is presented for the aerodynamic optimization of singleand multi-element airfoil configurations. The flow is governed by the compressible Navier‐Stokes equations in conjunction with a one-equation turbulence model. The preconditioned generalized minimum residual method is applied to solve the discreteadjoint equation, leading to a fast computation of accurate objective function gradients. Optimization constraints are enforced through a penalty formulation, and the resulting unconstrained problem is solved via a quasi-Newton method. Design examples include lift-enhancement and multi-point lift-constrained drag minimization problems. Furthermore, the new algorithm is used to compute a Pareto front for a multi-objective problem, and the results are validated using a genetic algorithm. Overall, the new algorithm provides an ecient and robust approach for addressing the issues of complex aerodynamic

Proceedings ArticleDOI
12 May 2002
TL;DR: The differential evolution algorithm is extended to multiobjective optimization problems by using a Pareto-based approach and performs well when applied to several test optimization problems from the literature.
Abstract: Differential evolution is a simple, fast, and robust evolutionary algorithm that has proven effective in determining the global optimum for several difficult single-objective optimization problems. In this paper, the differential evolution algorithm is extended to multiobjective optimization problems by using a Pareto-based approach. The algorithm performs well when applied to several test optimization problems from the literature.