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Showing papers by "Chinese Center for Disease Control and Prevention published in 2018"


Journal ArticleDOI
Gregory A. Roth1, Gregory A. Roth2, Degu Abate3, Kalkidan Hassen Abate4  +1025 moreInstitutions (333)
TL;DR: Non-communicable diseases comprised the greatest fraction of deaths, contributing to 73·4% (95% uncertainty interval [UI] 72·5–74·1) of total deaths in 2017, while communicable, maternal, neonatal, and nutritional causes accounted for 18·6% (17·9–19·6), and injuries 8·0% (7·7–8·2).

5,211 citations


Journal ArticleDOI
Jeffrey D. Stanaway1, Ashkan Afshin1, Emmanuela Gakidou1, Stephen S Lim1  +1050 moreInstitutions (346)
TL;DR: This study estimated levels and trends in exposure, attributable deaths, and attributable disability-adjusted life-years (DALYs) by age group, sex, year, and location for 84 behavioural, environmental and occupational, and metabolic risks or groups of risks from 1990 to 2017 and explored the relationship between development and risk exposure.

2,910 citations


Journal ArticleDOI
TL;DR: PM2.5 exposure may be related to additional causes of death than the five considered by the GBD and that incorporation of risk information from other, nonoutdoor, particle sources leads to underestimation of disease burden, especially at higher concentrations.
Abstract: Exposure to ambient fine particulate matter (PM2.5) is a major global health concern. Quantitative estimates of attributable mortality are based on disease-specific hazard ratio models that incorporate risk information from multiple PM2.5 sources (outdoor and indoor air pollution from use of solid fuels and secondhand and active smoking), requiring assumptions about equivalent exposure and toxicity. We relax these contentious assumptions by constructing a PM2.5-mortality hazard ratio function based only on cohort studies of outdoor air pollution that covers the global exposure range. We modeled the shape of the association between PM2.5 and nonaccidental mortality using data from 41 cohorts from 16 countries-the Global Exposure Mortality Model (GEMM). We then constructed GEMMs for five specific causes of death examined by the global burden of disease (GBD). The GEMM predicts 8.9 million [95% confidence interval (CI): 7.5-10.3] deaths in 2015, a figure 30% larger than that predicted by the sum of deaths among the five specific causes (6.9; 95% CI: 4.9-8.5) and 120% larger than the risk function used in the GBD (4.0; 95% CI: 3.3-4.8). Differences between the GEMM and GBD risk functions are larger for a 20% reduction in concentrations, with the GEMM predicting 220% higher excess deaths. These results suggest that PM2.5 exposure may be related to additional causes of death than the five considered by the GBD and that incorporation of risk information from other, nonoutdoor, particle sources leads to underestimation of disease burden, especially at higher concentrations.

1,283 citations


Journal ArticleDOI
04 Apr 2018-Nature
TL;DR: Around 200 new vertebrates-specific viruses are discovered, and every vertebrate-specific viral family known to infect mammals and birds is also present in amphibians, reptiles or fish, suggesting that evolution of vertebrate viruses mirrors that of vertebrates hosts.
Abstract: Our understanding of the diversity and evolution of vertebrate RNA viruses is largely limited to those found in mammalian and avian hosts and associated with overt disease. Here, using a large-scale meta-transcriptomic approach, we discover 214 vertebrate-associated viruses in reptiles, amphibians, lungfish, ray-finned fish, cartilaginous fish and jawless fish. The newly discovered viruses appear in every family or genus of RNA virus associated with vertebrate infection, including those containing human pathogens such as influenza virus, the Arenaviridae and Filoviridae families, and have branching orders that broadly reflected the phylogenetic history of their hosts. We establish a long evolutionary history for most groups of vertebrate RNA virus, and support this by evaluating evolutionary timescales using dated orthologous endogenous virus elements. We also identify new vertebrate-specific RNA viruses and genome architectures, and re-evaluate the evolution of vector-borne RNA viruses. In summary, this study reveals diverse virus–host associations across the entire evolutionary history of the vertebrates. Around 200 new vertebrate-specific viruses are discovered, and every vertebrate-specific viral family known to infect mammals and birds is also present in amphibians, reptiles or fish, suggesting that evolution of vertebrate viruses mirrors that of vertebrate hosts.

532 citations


Journal ArticleDOI
TL;DR: Taking advantage of a novel application of modeling framework and the most recent ground-level PM2.5 observations, the machine learning method showed higher predictive ability than previous studies.

331 citations


Journal ArticleDOI
Rafael Lozano1, Nancy Fullman, Degu Abate2, Solomon M Abay  +1313 moreInstitutions (252)
TL;DR: A global attainment analysis of the feasibility of attaining SDG targets on the basis of past trends and a estimates of health-related SDG index values in countries assessed at the subnational level varied substantially, particularly in China and India, although scores in Japan and the UK were more homogeneous.

312 citations


Journal ArticleDOI
TL;DR: This work estimated population in 195 locations by single year of age and single calendar year from 1950 to 2017 with standardised and replicable methods and used the cohort-component method of population projection, with inputs of fertility, mortality, population, and migration data.

287 citations


Journal ArticleDOI
TL;DR: The estimated overall prevalence of COPD in China in 2014–15 was 13·6%, indicating that this disease has become a major public-health problem.

248 citations


Journal ArticleDOI
31 Oct 2018-BMJ
TL;DR: This nationwide study provides a comprehensive picture of the non-linear associations between ambient temperature and mortality from all natural causes and main cardiorespiratory diseases, as well as the corresponding disease burden that is mainly attributable to moderate cold temperatures in China.
Abstract: Objectives To examine the association between temperature and cause specific mortality, and to quantify the corresponding disease burden attributable to non-optimum ambient temperatures. Design Time series analysis. Setting 272 main cities in China. Population Non-accidental deaths in 272 cities covered by the Disease Surveillance Point System of China, from January 2013 to December 2015. Main outcomes and measures Daily numbers of deaths from all non-accidental causes and main cardiorespiratory diseases. Potential effect modifiers included demographic, climatic, geographical, and socioeconomic characteristics. The analysis used distributed lag non-linear models to estimate city specific associations, and multivariate meta-regression analysis to obtain the effect estimates at national and regional levels. Results 1 826 186 non-accidental deaths from total causes were recorded in the study period. Temperature and mortality consistently showed inversely J shaped associations. At the national average level, relative to the minimum mortality temperature (22.8°C, 79.1st centile), the mortality risk of extreme cold temperature (at −1.4°C, the 2.5th centile) lasted for more than 14 days, whereas the risk of extreme hot temperature (at 29.0°C, the 97.5th centile) appeared immediately and lasted for two to three days. 14.33% of non-accidental total mortality was attributable to non-optimum temperatures, of which moderate cold (ranging from −1.4 to 22.8°C), moderate heat (22.8 to 29.0°C), extreme cold (−6.4 to −1.4°C), and extreme heat (29.0 to 31.6°C) temperatures corresponded to attributable fractions of 10.49%, 2.08%, 1.14%, and 0.63%, respectively. The attributable fractions were 17.48% for overall cardiovascular disease, 18.76% for coronary heart disease, 16.11% for overall stroke, 14.09% for ischaemic stroke, 18.10% for haemorrhagic stroke, 10.57% for overall respiratory disease, and 12.57% for chronic obstructive pulmonary diseases. The mortality risk and burden were more prominent in the temperate monsoon and subtropical monsoon climatic zones, in specific subgroups (female sex, age ≥75 years, and ≤9 years spent in education), and in cities characterised by higher urbanisations rates and shorter durations of central heating. Conclusions This nationwide study provides a comprehensive picture of the non-linear associations between ambient temperature and mortality from all natural causes and main cardiorespiratory diseases, as well as the corresponding disease burden that is mainly attributable to moderate cold temperatures in China. The findings on vulnerability characteristics can help improve clinical and public health practices to reduce disease burden associated with current and future abnormal weather.

244 citations


Journal ArticleDOI
28 Aug 2018-JAMA
TL;DR: Between 195 000 and 276 000 firearm injury deaths globally in 2016 were estimated, the majority of which were firearm homicides, and there was variation among countries and across demographic subgroups.
Abstract: Importance Understanding global variation in firearm mortality rates could guide prevention policies and interventions. Objective To estimate mortality due to firearm injury deaths from 1990 to 2016 in 195 countries and territories. Design, Setting, and Participants This study used deidentified aggregated data including 13 812 location-years of vital registration data to generate estimates of levels and rates of death by age-sex-year-location. The proportion of suicides in which a firearm was the lethal means was combined with an estimate of per capita gun ownership in a revised proxy measure used to evaluate the relationship between availability or access to firearms and firearm injury deaths. Exposures Firearm ownership and access. Main Outcomes and Measures Cause-specific deaths by age, sex, location, and year. Results Worldwide, it was estimated that 251 000 (95% uncertainty interval [UI], 195 000-276 000) people died from firearm injuries in 2016, with 6 countries (Brazil, United States, Mexico, Colombia, Venezuela, and Guatemala) accounting for 50.5% (95% UI, 42.2%-54.8%) of those deaths. In 1990, there were an estimated 209 000 (95% UI, 172 000 to 235 000) deaths from firearm injuries. Globally, the majority of firearm injury deaths in 2016 were homicides (64.0% [95% UI, 54.2%-68.0%]; absolute value, 161 000 deaths [95% UI, 107 000-182 000]); additionally, 27% were firearm suicide deaths (67 500 [95% UI, 55 400-84 100]) and 9% were unintentional firearm deaths (23 000 [95% UI, 18 200-24 800]). From 1990 to 2016, there was no significant decrease in the estimated global age-standardized firearm homicide rate (−0.2% [95% UI, −0.8% to 0.2%]). Firearm suicide rates decreased globally at an annualized rate of 1.6% (95% UI, 1.1-2.0), but in 124 of 195 countries and territories included in this study, these levels were either constant or significant increases were estimated. There was an annualized decrease of 0.9% (95% UI, 0.5%-1.3%) in the global rate of age-standardized firearm deaths from 1990 to 2016. Aggregate firearm injury deaths in 2016 were highest among persons aged 20 to 24 years (for men, an estimated 34 700 deaths [95% UI, 24 900-39 700] and for women, an estimated 3580 deaths [95% UI, 2810-4210]). Estimates of the number of firearms by country were associated with higher rates of firearm suicide ( P R2 = 0.21) and homicide ( P R2 = 0.35). Conclusions and Relevance This study estimated between 195 000 and 276 000 firearm injury deaths globally in 2016, the majority of which were firearm homicides. Despite an overall decrease in rates of firearm injury death since 1990, there was variation among countries and across demographic subgroups.

196 citations


Journal ArticleDOI
08 Mar 2018-Cell
TL;DR: 100 years after the infamous “Spanish flu” pandemic, the 2017–2018 flu season has been severe, with numerous infections worldwide.

Journal ArticleDOI
08 Mar 2018-Cell
TL;DR: How metagenomics has changed the authors' understanding of RNA viruses and present some of the remaining challenges, including characterization of the "dark matter" of divergent viral genomes are discussed.

Journal ArticleDOI
TL;DR: Long-term exposure to PM2·5 is associated with an increased risk of all-cause mortality among adults aged 65 years and older in China, but the magnitude of the risk declines as the concentration of PM2 ·5 increases.
Abstract: Summary Background Evidence from cohort studies in North America and Europe indicates that long-term exposure to fine particulate matter (PM2·5) is associated with an increased mortality risk. However, this association has rarely been quantified at higher ambient concentrations. We estimated the hazard ratio (HR) for all-cause mortality from long-term exposure to PM2·5 in a well established Chinese cohort of older adults. Methods The Chinese Longitudinal Healthy Longevity Survey (CLHLS) is a prospective cohort study of men and women aged 65 years and older enrolled in 2008 and followed up through 2014 for mortality events. We studied individuals for whom residential locations were available in 2008 for linkage to 1 km grids of PM2·5 concentrations, derived from satellite remote sensing. Cox proportional hazards models were used to estimate the effect of long-term exposure to PM2·5 on all-cause mortality, controlling for age, sex, smoking status, drinking status, physical activity, body-mass index, household income, marital status, and education. We then used our results to estimate premature mortality related to PM2·5 exposure in the population aged 65 years and older in China in 2010. Findings 13 344 individuals in the CLHLS cohort had data for all timepoints, yielding follow-up data for 49 440 person-years. In a 3-year window, these individuals were exposed to a median PM2·5 concentration of 50·7 μg/m3 (range 6·7–113·3). The overall HR for a 10 μg/m3 increase in this value was 1·08 (95% CI 1·06–1·09). In stratified analyses, HRs were higher in rural than in urban locations, in southern versus northern regions, and with exposure to lower versus higher PM2·5 concentrations. Based on the overall HR, we estimated that 1 765 820 people aged 65 years and older in China in 2010 had premature mortality related to PM2·5 exposure. Interpretation Long-term exposure to PM2·5 is associated with an increased risk of all-cause mortality among adults aged 65 years and older in China, but the magnitude of the risk declines as the concentration of PM2·5 increases. Funding National Natural Science Foundation of China, National High-Level Talents Special Support Plan of China for Young Talents, US National Aeronautics and Space Administration, and the Columbia University Global Policy Initiative.

Journal ArticleDOI
Gaya K. Amarasinghe1, Nidia G. Aréchiga Ceballos, Ashley C. Banyard, Christopher F. Basler2, Sina Bavari3, Andrew J. Bennett4, Kim R. Blasdell5, Thomas Briese6, Alexander Bukreyev7, Yíngyún Caì8, Charles H. Calisher9, Cristine Campos Lawson8, Kartik Chandran10, Colin A. Chapman11, Colin A. Chapman12, Colin A. Chapman13, Charles Y. Chiu14, Kang Seuk Choi, Peter L. Collins8, Ralf G. Dietzgen15, Valerian V. Dolja16, Olga Dolnik17, Leslie L. Domier18, Ralf Dürrwald19, John M. Dye3, Andrew J. Easton20, Hideki Ebihara21, Juan Emilio Echevarría22, Anthony R. Fooks, Pierre Formenty23, Ron A. M. Fouchier24, Conrad M. Freuling25, Elodie Ghedin26, Tony L. Goldberg4, Roger Hewson27, Masayuki Horie12, Timothy H. Hyndman28, Dàohóng Jiāng29, Robert Kityo30, Gary P. Kobinger31, Hideki Kondō32, Eugene V. Koonin8, Mart Krupovic33, Gael Kurath34, Robert A. Lamb35, Benhur Lee36, Eric M. Leroy, Piet Maes37, Andrea Maisner17, Denise A. Marston, Sunil K. Mor38, Thomas Müller25, Elke Mühlberger39, Víctor Manuel Neira Ramírez40, Sergey V. Netesov41, Terry Fei Fan Ng14, Norbert Nowotny42, Norbert Nowotny43, Gustavo Palacios3, Jean L. Patterson44, Janusz T. Paweska, Susan Payne45, Karla Prieto3, Bertus K. Rima46, Paul A. Rota47, Dennis Rubbenstroth48, Martin Schwemmle48, Stuart G. Siddell49, Sophie J. Smither50, Qisheng Song51, Timothy Song26, Mark D. Stenglein9, David M. Stone, Ayato Takada52, Robert B. Tesh7, Luciano M. Thomazelli53, Keizō Tomonaga12, Noël Tordo33, Jonathan S. Towner47, Nikos Vasilakis7, Sonia Vázquez-Morón22, Claudio Verdugo54, Viktor E. Volchkov55, Victoria Wahl, Peter J. Walker15, David Wang1, Lin-Fa Wang56, James F. X. Wellehan57, Michael R. Wiley7, Michael R. Wiley58, Anna E. Whitfield59, Yuri I. Wolf8, Gōngyín Yè60, Yǒng Zhèn Zhāng61, Jens H. Kuhn8 
Washington University in St. Louis1, Georgia State University2, United States Army Medical Research Institute of Infectious Diseases3, University of Wisconsin-Madison4, Commonwealth Scientific and Industrial Research Organisation5, Columbia University6, University of Texas Medical Branch7, National Institutes of Health8, Colorado State University9, Yeshiva University10, Wildlife Conservation Society11, Kyoto University12, McGill University13, University of California, San Francisco14, University of Queensland15, Oregon State University16, University of Marburg17, University of Illinois at Chicago18, Robert Koch Institute19, University of Warwick20, Mayo Clinic21, Carlos III Health Institute22, World Health Organization23, Erasmus University Rotterdam24, Friedrich Loeffler Institute25, New York University26, Public Health England27, Murdoch University28, Huazhong Agricultural University29, Makerere University30, Laval University31, Okayama University32, Pasteur Institute33, United States Geological Survey34, Northwestern University35, Icahn School of Medicine at Mount Sinai36, Katholieke Universiteit Leuven37, University of Minnesota38, Boston University39, University of Chile40, Novosibirsk State University41, University of Veterinary Medicine Vienna42, University of Medicine and Health Sciences43, Texas Biomedical Research Institute44, Texas A&M University45, Queen's University Belfast46, Centers for Disease Control and Prevention47, University of Freiburg48, University of Bristol49, Defence Science and Technology Laboratory50, University of Missouri51, Hokkaido University52, University of São Paulo53, Austral University of Chile54, École normale supérieure de Lyon55, National University of Singapore56, University of Florida57, University of Nebraska Medical Center58, North Carolina State University59, Zhejiang University60, Chinese Center for Disease Control and Prevention61
TL;DR: The updated taxonomy of the order Mononegavirales is presented as now accepted by the International Committee on Taxonomy of Viruses (ICTV) and additional taxonomic proposals that may affect the order in the near future are summarized.
Abstract: In 2018, the order Mononegavirales was expanded by inclusion of 1 new genus and 12 novel species. This article presents the updated taxonomy of the order Mononegavirales as now accepted by the International Committee on Taxonomy of Viruses (ICTV) and summarizes additional taxonomic proposals that may affect the order in the near future.

Journal ArticleDOI
TL;DR: The capacity of GRP78 to facilitate surface attachment of both a human coronav virus and a phylogenetically related bat coronavirus exemplifies the need for continuous surveillance of the evolution of animal coronaviruses to monitor their potential for human adaptations.

Journal ArticleDOI
Piet Maes1, S. V. Alkhovsky, Yīmíng Bào2, Martin Beer3, Monica Birkhead, Thomas Briese4, Michael J. Buchmeier5, Charles H. Calisher6, Rémi N. Charrel7, Il-Ryong Choi8, Christopher S. Clegg, Juan Carlos de la Torre9, Eric Delwart10, Joseph L. DeRisi10, Patrick L. Di Bello11, Francesco Di Serio, Michele Digiaro, Valerian V. Dolja12, Christian Drosten13, Tobiasz Druciarek11, Jiang Du14, Hideki Ebihara15, Toufic Elbeaino, Rose C. Gergerich11, Amethyst Gillis, Jean-Paul J. Gonzalez16, Anne-Lise Haenni17, Jussi Hepojoki18, Jussi Hepojoki19, Udo Hetzel18, Udo Hetzel19, Thiện Hồ11, Ni Hong20, Rakesh K. Jain21, Petrus Jansen van Vuren, Qi Jin14, Miranda Gilda Jonson22, Sandra Junglen, Karen E. Keller23, Alan Kemp, Anja Kipar19, Anja Kipar18, Nikola O. Kondov24, Eugene V. Koonin25, Richard Kormelink26, Yegor Korzyukov19, Mart Krupovic27, Amy J. Lambert28, Alma G. Laney29, Matthew LeBreton, Igor S. Lukashevich30, Marco Marklewitz, Wanda Markotter, Giovanni P. Martelli31, Robert R. Martin23, Nicole Mielke-Ehret32, H.-P. Mühlbach32, Beatriz Navarro, Terry Fei Fan Ng10, Márcio Roberto Teixeira Nunes33, Gustavo Palacios34, Janusz T. Paweska, Clarence J. Peters33, Alexander Plyusnin19, Sheli R. Radoshitzky34, Víctor Romanowski35, Pertteli Salmenperä19, Maria S. Salvato36, Hélène Sanfaçon, Takahide Sasaya37, Connie S. Schmaljohn34, Bradley S. Schneider, Yukio Shirako38, Stuart G. Siddell39, Tarja Sironen19, Mark D. Stenglein6, Nadia Storm, Hari Kishan Sudini40, Robert B. Tesh33, Ioannis E. Tzanetakis11, Mangala Uppala40, Olli Vapalahti19, Nikos Vasilakis33, Peter J. Walker41, Guoping Wang20, Liping Wang20, Yanxiang Wang20, Taiyun Wei42, Michael R. Wiley34, Michael R. Wiley43, Yuri I. Wolf25, Nathan D. Wolfe44, Zhìqiáng Wú14, Wenxing Xu20, Wenxing Xu45, Li Yang46, Zuòkūn Yāng20, Shyi-Dong Yeh47, Yǒng-Zhèn Zhāng46, Yàzhōu Zhèng20, Xueping Zhou, Chénxī Zhū20, Florian Zirkel13, Jens H. Kuhn25 
Katholieke Universiteit Leuven1, Chinese Academy of Sciences2, Friedrich Loeffler Institute3, Columbia University4, University of California, Irvine5, Colorado State University6, Aix-Marseille University7, International Rice Research Institute8, Scripps Research Institute9, University of California, San Francisco10, University of Arkansas System11, Oregon State University12, University of Bonn13, Peking Union Medical College14, Mayo Clinic15, Kansas State University16, University of Paris17, University of Zurich18, University of Helsinki19, Huazhong Agricultural University20, Indian Agricultural Research Institute21, Seoul National University22, United States Department of Agriculture23, Systems Research Institute24, National Institutes of Health25, Wageningen University and Research Centre26, Pasteur Institute27, Centers for Disease Control and Prevention28, North Carolina State University29, University of Louisville30, University of Bari31, University of Hamburg32, University of Texas Medical Branch33, United States Army Medical Research Institute of Infectious Diseases34, National University of La Plata35, University of Maryland, Baltimore36, National Agriculture and Food Research Organization37, University of Tokyo38, University of Bristol39, International Crops Research Institute for the Semi-Arid Tropics40, University of Queensland41, Fujian Agriculture and Forestry University42, University of Nebraska Medical Center43, Global Viral44, Chinese Ministry of Agriculture45, Chinese Center for Disease Control and Prevention46, National Chung Hsing University47
TL;DR: The updated taxonomy of the family Arenaviridae and the order Bunyavirales is presented as now accepted by the International Committee on Taxonomy of Viruses (ICTV) and additional taxonomic proposals that may affect the order in the near future are summarized.
Abstract: In 2018, the family Arenaviridae was expanded by inclusion of 1 new genus and 5 novel species. At the same time, the recently established order Bunyavirales was expanded by 3 species. This article presents the updated taxonomy of the family Arenaviridae and the order Bunyavirales as now accepted by the International Committee on Taxonomy of Viruses (ICTV) and summarizes additional taxonomic proposals that may affect the order in the near future.

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TL;DR: The Tsinghua–Lancet Commission on Healthy Cities in China aimed to characterise, understand, and address urban health challenges in the unique context of China’s rapid and dynamic urban development.


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TL;DR: A new subtype of TBEV is discovered in wild rodent Marmota himalayana in Qinghai-Tibet Plateau in China, proposed as subtype Himalayan (Him-TBEV), supported by comparative analysis using nucleotide and amino acid sequences of E protein and polyprotein.
Abstract: Tick-borne encephalitis virus (TBEV) has been classified into three subtypes, namely the European (Eu-TBEV), Far Eastern (FE-TBEV), and Siberian (Sib-TBEV). In this study, we discovered a new subtype of TBEV in wild rodent Marmota himalayana in Qinghai-Tibet Plateau in China, proposed as subtype Himalayan (Him-TBEV). Two complete genomes of TBEV were obtained from respiratory samples of 200 marmots. The phylogenetic analysis using the E protein and polyprotein demonstrated that the two strains of Him-TBEV formed an independent branch, separated from Eu-TBEV, Sib-TBEV, and FE-TBEV. The nomenclature of Him-TBEV as a new subtype was also supported by comparative analysis using nucleotide and amino acid sequences of E protein and polyprotein. For E protein, The Him-TBEV showed 82.6-84.6% nucleotide identities and 92.7-95.0% amino acid identities with other three subtypes. For polyprotein, the Him-TBEV showed 83.5-85.2% nucleotide identities and 92.6-94.2% amino acids identities with other three subtypes. Furthermore, of 69 amino acid substitutions profiles detected in complete polyprotein of 112 strains of TBEV, Him-TBEV subtype displayed unique amino acids in the 36 positions. Notably, for the subtype-specific amino acid position 206 of E protein, Him-TBEV shared the Val with Eu-TBEV, but differed from FE-TBEV and Sib-TBEV. The evolutionary analysis with BEAST suggested that Him-TBEV diverged from other subtypes of eastern TBEV group about 2469 years ago. It should be mentioned that Qinghai-Tibet Plateau in China is the plague endemic region where Marmota himalayana is the primary host. The public health significance of discovery of Him-TBEV in Marmota himalayana must be carefully evaluated.

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TL;DR: Assessment of the latest levels of serum lipids, prevalence of dyslipidemia and achievement of LDL-C lowering targets among Chinese adults found a high prevalence of abnormal serum lipid levels, more common in urban adults or those with obesity or central obesity.

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TL;DR: The results expand the understanding of the viromes of rodents and insectivores in China and suggest that there is high diversity of viruses awaiting discovery in these species in Asia.
Abstract: Rodents represent around 43% of all mammalian species, are widely distributed, and are the natural reservoirs of a diverse group of zoonotic viruses, including hantaviruses, Lassa viruses, and tick-borne encephalitis viruses. Thus, analyzing the viral diversity harbored by rodents could assist efforts to predict and reduce the risk of future emergence of zoonotic viral diseases. We used next-generation sequencing metagenomic analysis to survey for a range of mammalian viral families in rodents and other small animals of the orders Rodentia, Lagomorpha, and Soricomorpha in China. We sampled 3,055 small animals from 20 provinces and then outlined the spectra of mammalian viruses within these individuals and the basic ecological and genetic characteristics of novel rodent and shrew viruses among the viral spectra. Further analysis revealed that host taxonomy plays a primary role and geographical location plays a secondary role in determining viral diversity. Many viruses were reported for the first time with distinct evolutionary lineages, and viruses related to known human or animal pathogens were identified. Phylogram comparison between viruses and hosts indicated that host shifts commonly happened in many different species during viral evolutionary history. These results expand our understanding of the viromes of rodents and insectivores in China and suggest that there is high diversity of viruses awaiting discovery in these species in Asia. These findings, combined with our previous bat virome data, greatly increase our knowledge of the viral community in wildlife in a densely populated country in an emerging disease hotspot.

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TL;DR: The high prevalence of MCRPEC in the community poses a substantial risk for colistin usage in clinical practice and suggests the need for intestinal screening of mCR-1 carriers in intensive care units in Chinese hospitals, and suggests that aquaculture is a significant reservoir of mcr-1.
Abstract: MCR-1-positve Escherichia coli (MCRPEC) have been reported in humans worldwide; however, thus far, their prevalence is low and potential sources for human mcr-1 carriage have not yet been identified. Here, we analyse a nationwide epidemiological dataset on MCRPEC in humans throughout China and assess the factors associated with MCRPEC carriage using natural and national anthropogenic data. We identified 774 non-duplicate MCRPEC isolates from 774 stool samples collected from 5,159 healthy individuals in 30 provinces and municipalities in 2016, with a prevalence of MCRPEC ranging from 3.7 to 32.7% (average: 15.0%)—substantially higher than previously reported. MCRPEC carriage was associated with provincial regions, the production of sheep and freshwater aquaculture, annual consumption of total meat, pork and mutton, and daily intake of aquaculture products. MCRPEC was significantly more prevalent in provinces with higher aquaculture industries. Whole-genome sequencing analysis revealed that the MCRPEC isolates were clustered into four distinct lineages, two of which were dominant and harboured most of the MCRPEC isolates. The high prevalence of MCRPEC in the community poses a substantial risk for colistin usage in clinical practice and suggests the need for intestinal screening of mcr-1 carriers in intensive care units in Chinese hospitals. Furthermore, our data suggest that aquaculture is a significant reservoir of mcr-1.

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TL;DR: Meta-transcriptomics shows that the RNA virus world is more fluid than previously realized, with relatively frequent changes in genome length and structure, and is suggested that proposals for virus classification pay careful attention to the wonders unearthed in this new age of virus discovery.

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TL;DR: A genome-wide association study of Mycobacterium tuberculosis clinical isolates finds mutations in prpR that alter propionate metabolism and mediate multidrug tolerance, defining a previously unrecognized and clinically prevalent class of M. tuberculosis variants that undermine antibiotic efficacy and drive drug resistance.
Abstract: The global epidemic of drug-resistant tuberculosis is a catastrophic example of how antimicrobial resistance is undermining the public health gains made possible by combination drug therapy. Recent evidence points to unappreciated bacterial factors that accelerate the emergence of drug resistance. In a genome-wide association study of Mycobacterium tuberculosis isolates from China, we find mutations in the gene encoding the transcription factor prpR enriched in drug-resistant strains. prpR mutations confer conditional drug tolerance to three of the most effective classes of antibiotics by altering propionyl-CoA metabolism. prpR-mediated drug tolerance is carbon-source dependent, and while readily detectable during infection of human macrophages, is not captured by standard susceptibility testing. These data define a previously unrecognized and clinically prevalent class of M. tuberculosis variants that undermine antibiotic efficacy and drive drug resistance.

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19 Jun 2018-PLOS ONE
TL;DR: The prevalence of metabolic syndrome in men was not different from that in women, and there are sex-specific associations between multiple risk factors and metabolic syndrome.
Abstract: Objectives The aim of this study was to examine sex disparity in metabolic syndrome prevalence and its risk factors among Chinese adults. Methods Using the 2010–2012 China National Nutrition and Health Survey (CNNHS), a nationally representative cross-sectional study on nutrition and non-communicable chronic diseases, a total of 98,042 participants aged 18 years and older were included in the analysis. Dietary information was collected with a food frequency questionnaire (FFQ). Metabolic syndrome was defined according to the updated NCEP ATP III criteria. A multivariable logistic regression model was performed to examine the associations between sociodemographic and dietary factors with metabolic syndrome prevalence, and the results are presented using odd ratios (ORs) and 95% confidence intervals (CIs). Results The overall standardized prevalence of metabolic syndrome was 24.2% (24.6% in men and 23.8% in women). The metabolic syndrome prevalence was positively associated with age in men and women. The prevalence of metabolic syndrome was negatively associated with the physical activity level among men and inversely associated with the education level among women (P for trend < 0.01). Frequent consumption of fungi and algae was an underlying risk factor for metabolic syndrome in men, whereas frequent consumption of nuts and pork was associated with a decreased prevalence of metabolic syndrome in women. Conclusions The prevalence of metabolic syndrome in men was not different from that in women. There are sex-specific associations between multiple risk factors and metabolic syndrome.


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TL;DR: PM2.5-attributable health risk is closely associated with high population density and high levels of pollution in China and further estimates using long-term historical exposure data and concentration-response (C-R) relationships should be completed in the future to investigate longer-term trends in the effects of PM 2.5.

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TL;DR: Overall, less‐potent medicinal ICG can be perfectly rescued by bioengineered HBc VLP to realize enhanced cancer optotheranostics.
Abstract: In recent years, hepatitis B core protein virus-like particle (HBc VLP) is an impressive biomaterial, which has attracted considerable attention due to favorable properties such as structural stability, high uptake efficiency, and biocompatibility in biomedical applications. Heretofore, only a few attempts have been made to apply it in physical, chemical, and biological therapy for cancer. In this study, a tumor-targeting RGD-HBc VLP is first fabricated through genetic engineering. For image-guided cancer phototherapy, indocyanine green (ICG) is loaded into RGD-HBc VLP via a disassembly/reassembly pathway and electrostatic attraction with high efficiency. The self-assembled stable RGD-HBc VLP significantly improves body retention (fourfold longer), aqueous stability, and target specificity of ICG. Remarkably, these positive reformations promote more accurate and sensitive imaging of U87MG tumor, as well as prolonged tumor destruction in comparison with free ICG. Moreover, the photothermal and photodynamic effect on tumors are quantitatively differentiated by multiple linear regression analysis. Overall, less-potent medicinal ICG can be perfectly rescued by bioengineered HBc VLP to realize enhanced cancer optotheranostics.

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TL;DR: This nationwide study demonstrated associations of daily SO2 concentrations with increased total and cardiorespiratory mortality, but the associations might not be independent from NO2.

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TL;DR: This analysis is the largest study done in a developing country, and provides robust evidence of the association between short-term exposure to ambient carbon monoxide and increased cardiovascular disease mortality, especially coronary heart disease mortality.