Chung-Ang University

Abstract: Despite recent advances in commercially optimized identification systems, bacterial identification remains a challenging task in many routine microbiological laboratories, especially in situations where taxonomically novel isolates are involved. The 16S rRNA gene has been used extensively for this task when coupled with a well-curated database, such as EzTaxon, containing sequences of type strains of prokaryotic species with validly published names. Although the EzTaxon database has been widely used for routine identification of prokaryotic isolates, sequences from uncultured prokaryotes have not been considered. Here, the next generation database, named EzTaxon-e, is formally introduced. This new database covers not only species within the formal nomenclatural system but also phylotypes that may represent species in nature. In addition to an identification function based on Basic Local Alignment Search Tool (blast) searches and pairwise global sequence alignments, a new objective method of assessing the degree of completeness in sequencing is proposed. All sequences that are held in the EzTaxon-e database have been subjected to phylogenetic analysis and this has resulted in a complete hierarchical classification system. It is concluded that the EzTaxon-e database provides a useful taxonomic backbone for the identification of cultured and uncultured prokaryotes and offers a valuable means of communication among microbiologists who routinely encounter taxonomically novel isolates. The database and its analytical functions can be found at http://eztaxon-e.ezbiocloud.net/.

Abstract: The RENO experiment has observed the disappearance of reactor electron antineutrinos, consistent with neutrino oscillations, with a significance of 4.9 standard deviations. Antineutrinos from six $2.8\text{ }\text{ }{\mathrm{GW}}_{\mathrm{th}}$ reactors at the Yonggwang Nuclear Power Plant in Korea, are detected by two identical detectors located at 294 and 1383 m, respectively, from the reactor array center. In the 229 d data-taking period between 11 August 2011 and 26 March 2012, the far (near) detector observed 17102 (154088) electron antineutrino candidate events with a background fraction of 5.5% (2.7%). The ratio of observed to expected numbers of antineutrinos in the far detector is $0.920\ifmmode\pm\else\textpm\fi{}0.009(\mathrm{stat})\ifmmode\pm\else\textpm\fi{}0.014(\mathrm{syst})$. From this deficit, we determine ${sin }^{2}2{\ensuremath{\theta}}_{13}=0.113\ifmmode\pm\else\textpm\fi{}0.013(\mathrm{stat})\ifmmode\pm\else\textpm\fi{}0.019(\mathrm{syst})$ based on a rate-only analysis.

Abstract: MIMO-OFDM is a key technology for next-generation cellular communications (3GPP-LTE, Mobile WiMAX, IMT-Advanced) as well as wireless LAN (IEEE 802.11a, IEEE 802.11n), wireless PAN (MB-OFDM), and broadcasting (DAB, DVB, DMB). In MIMO-OFDM Wireless Communications with MATLAB, the authors provide a comprehensive introduction to the theory and practice of wireless channel modeling, OFDM, and MIMO, using MATLAB programs to simulate the various techniques on MIMO-OFDM systems. One of the only books in the area dedicated to explaining simulation aspects Covers implementation to help cement the key concepts Uses materials that have been classroom-tested in numerous universities Provides the analytic solutions and practical examples with downloadable MATLAB codes Simulation examples based on actual industry and research projects Presentation slides with key equations and figures for instructor use MIMO-OFDM Wireless Communications with MATLAB is a key text for graduate students in wireless communications. Professionals and technicians in wireless communication fields, graduate students in signal processing, as well as senior undergraduates majoring in wireless communications will find this book a practical introduction to the MIMO-OFDM techniques. Instructor materials and MATLAB code examples available for download at www.wiley.com/go/chomimo

Abstract: Mercury is a widespread pollutant with distinct toxicological profiles, and it exists in a variety of different forms (metallic, ionic, and as part of organic and inorganic salts and complexes). Solvated mercuric ion (Hg), one of the most stable inorganic forms of mercury, is a caustic and carcinogenic material with high cellular toxicity. The most common organic source of mercury, methyl mercury, can accumulate in the human body through the food chain and cause serious and permanent damage to the brain with both acute and chronic toxicity. Methyl mercury is generated by microbial biomethylation in aquatic sediments from water-soluble mercuric ion (Hg). Therefore, routine detection of Hg is central to the environmental monitoring of rivers and larger bodies of water and for evaluating the safety of aquatically derived food supplies. Several methods for the detection of Hg, based upon organic fluorophores or chromophores, semiconductor nanocrystals, cyclic voltammetry, polymeric materials, proteins, and microcantilevers, have been developed. Colorimetric methods, in particular, are extremely attractive because they can be easily read out with the naked eye, in some cases at the point of use. Although there are now several chromophoric colorimetric sensors for Hg, all of them are either limited with respect to sensitivity (current limit of detection 1 mm) and selectivity, kinetically unstable, or incompatible with aqueous environments. Recently, DNA-functionalized gold nanoparticles (DNA– Au NPs) have been used in a variety of forms for the detection of proteins, oligonucleotides, certain metal ions, and other small molecules. DNA–Au NPs have high extinction coefficients (3–5 orders of magnitude higher than those of organic dye molecules) and unique distancedependent optical properties that can be chemically programmed through the use of specific DNA interconnects, which allows one, in certain cases, to detect targets of interest through colorimetric means. Moreover, these structures, when hybridized to complementary particles, exhibit extremely sharp melting transitions, which have been used to enhance the selectivity of detection systems based upon them. By using such an approach, one can typically detect nucleic acid targets in the low nanomolar to high picomolar target concentration range in colorimetric format. The ability to use such particles to detect Hg in the nanomolar concentration range in colorimetric format would be a significant advance, especially when one considers that commercial systems for detecting Hg rely on cumbersome inductively coupled plasma approaches that are not suitable for point-of-use applications. Herein, we present a highly selective and sensitive colorimetric detection method for Hg that relies on thymidine–Hg–thymidine coordination chemistry and complementary DNA–Au NPs with deliberately designed T–T mismatches. When two complementary DNA–Au NPs are combined, they form DNA-linked aggregates that can dissociate reversibly with a concomitant purple-to-red color change. 28] For our novel colorimetric Hg assay, however, we prepared two types of Au NPs (designated as probe A and probe B, see the Supporting Information), each functionalized with different thiolated-DNA sequences (probe A: 5’HS-C10-A10-T-A103’, probe B: 5’HS-C10-T10-T-T103’), which are complementary except for a single thymidine–thymidine mismatch (shown in bold; Scheme 1). Importantly, these particles also form stable aggregates and exhibit the characteristic sharp melting transitions (full width at half maximum< 1 8C) associated with aggregates formed from perfectly complementary particles, but with a lower melting temperature Tm. [17, 18] Since it is known that Hg will coordinate selectively to the bases that make up a T–T mismatch, we hypothesized that Hg would

Abstract: A method for annealing metal-oxide semiconductor films with deep-ultraviolet light yields thin-film transistors with performance comparable to that of thermally annealed devices, and widens the range of substrates on which such devices can be fabricated. Solution-processable metal-oxide semiconductors are attractive materials for low-cost, flexible electronics, but the need to anneal the deposited materials at relatively high temperatures limits the range of substrates on which such devices can be fabricated. Now Yong-Hoon Kim and colleagues demonstrate that irradiating the solution-cast films with deep ultraviolet light can obviate the need for an annealing step. In this system, photochemical activation serves essentially the same purpose as annealing, and the resulting semiconducting materials have device performance levels comparable to those produced using the high-temperature techniques. Amorphous metal-oxide semiconductors have emerged as potential replacements for organic and silicon materials in thin-film electronics. The high carrier mobility in the amorphous state, and excellent large-area uniformity, have extended their applications to active-matrix electronics, including displays, sensor arrays and X-ray detectors1,2,3,4,5,6,7. Moreover, their solution processability and optical transparency have opened new horizons for low-cost printable and transparent electronics on plastic substrates8,9,10,11,12,13. But metal-oxide formation by the sol–gel route requires an annealing step at relatively high temperature2,14,15,16,17,18,19, which has prevented the incorporation of these materials with the polymer substrates used in high-performance flexible electronics. Here we report a general method for forming high-performance and operationally stable metal-oxide semiconductors at room temperature, by deep-ultraviolet photochemical activation of sol–gel films. Deep-ultraviolet irradiation induces efficient condensation and densification of oxide semiconducting films by photochemical activation at low temperature. This photochemical activation is applicable to numerous metal-oxide semiconductors, and the performance (in terms of transistor mobility and operational stability) of thin-film transistors fabricated by this route compares favourably with that of thin-film transistors based on thermally annealed materials. The field-effect mobilities of the photo-activated metal-oxide semiconductors are as high as 14 and 7 cm2 V−1 s−1 (with an Al2O3 gate insulator) on glass and polymer substrates, respectively; and seven-stage ring oscillators fabricated on polymer substrates operate with an oscillation frequency of more than 340 kHz, corresponding to a propagation delay of less than 210 nanoseconds per stage.