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Showing papers by "École Polytechnique Fédérale de Lausanne published in 2010"


Book
03 Aug 2010
TL;DR: The dye-sensitized solar cells (DSC) as discussed by the authors provides a technically and economically credible alternative concept to present day p-n junction photovoltaic devices, where light is absorbed by a sensitizer, which is anchored to the surface of a wide band semiconductor.
Abstract: The dye-sensitized solar cells (DSC) provides a technically and economically credible alternative concept to present day p–n junction photovoltaic devices. In contrast to the conventional systems where the semiconductor assume both the task of light absorption and charge carrier transport the two functions are separated here. Light is absorbed by a sensitizer, which is anchored to the surface of a wide band semiconductor. Charge separation takes place at the interface via photo-induced electron injection from the dye into the conduction band of the solid. Carriers are transported in the conduction band of the semiconductor to the charge collector. The use of sensitizers having a broad absorption band in conjunction with oxide films of nanocrstalline morphology permits to harvest a large fraction of sunlight. Nearly quantitative conversion of incident photon into electric current is achieved over a large spectral range extending from the UV to the near IR region. Overall solar (standard AM 1.5) to current conversion efficiencies (IPCE) over 10% have been reached. There are good prospects to produce these cells at lower cost than conventional devices. Here we present the current state of the field, discuss new concepts of the dye-sensitized nanocrystalline solar cell (DSC) including heterojunction variants and analyze the perspectives for the future development of the technology.

4,159 citations


Book ChapterDOI
05 Sep 2010
TL;DR: This work proposes to use binary strings as an efficient feature point descriptor, which is called BRIEF, and shows that it is highly discriminative even when using relatively few bits and can be computed using simple intensity difference tests.
Abstract: We propose to use binary strings as an efficient feature point descriptor, which we call BRIEF. We show that it is highly discriminative even when using relatively few bits and can be computed using simple intensity difference tests. Furthermore, the descriptor similarity can be evaluated using the Hamming distance, which is very efficient to compute, instead of the L2 norm as is usually done. As a result, BRIEF is very fast both to build and to match. We compare it against SURF and U-SURF on standard benchmarks and show that it yields a similar or better recognition performance, while running in a fraction of the time required by either.

3,558 citations


Journal ArticleDOI
TL;DR: This critical review describes the latest developments in the sensitization of near-infrared luminescence, "soft" luminescent materials (liquid crystals, ionic liquids, ionogels), electroluminescentmaterials for organic light emitting diodes, with emphasis on white light generation, and applications in luminecent bio-sensing and bio-imaging based on time-resolved detection and multiphoton excitation.
Abstract: Recent startling interest for lanthanide luminescence is stimulated by the continuously expanding need for luminescent materials meeting the stringent requirements of telecommunication, lighting, electroluminescent devices, (bio-)analytical sensors and bio-imaging set-ups. This critical review describes the latest developments in (i) the sensitization of near-infrared luminescence, (ii) “soft” luminescent materials (liquid crystals, ionic liquids, ionogels), (iii) electroluminescent materials for organic light emitting diodes, with emphasis on white light generation, and (iv) applications in luminescent bio-sensing and bio-imaging based on time-resolved detection and multiphoton excitation (500 references).

2,895 citations


Journal ArticleDOI
Koji Nakamura1, K. Hagiwara, Ken Ichi Hikasa2, Hitoshi Murayama1  +180 moreInstitutions (92)
TL;DR: In this article, a biennial review summarizes much of particle physics using data from previous editions, plus 2158 new measurements from 551 papers, they list, evaluate and average measured properties of gauge bosons, leptons, quarks, mesons, and baryons.
Abstract: This biennial Review summarizes much of particle physics. Using data from previous editions, plus 2158 new measurements from 551 papers, we list, evaluate, and average measured properties of gauge bosons, leptons, quarks, mesons, and baryons. We also summarize searches for hypothetical particles such as Higgs bosons, heavy neutrinos, and supersymmetric particles. All the particle properties and search limits are listed in Summary Tables. We also give numerous tables, figures, formulae, and reviews of topics such as the Standard Model, particle detectors, probability, and statistics. Among the 108 reviews are many that are new or heavily revised including those on neutrino mass, mixing, and oscillations, QCD, top quark, CKM quark-mixing matrix, V-ud & V-us, V-cb & V-ub, fragmentation functions, particle detectors for accelerator and non-accelerator physics, magnetic monopoles, cosmological parameters, and big bang cosmology.

2,788 citations


Journal ArticleDOI
TL;DR: This data indicates that the prostate-Specific antigen in the europium-Tetracycline complex acts as a ‘spatially aggregating force’ to form terbium complexes in the Optical Probes.
Abstract: Keywords: Time-Resolved Fluorescence ; Resonance Energy-Transfer ; Near-Infrared Luminescence ; Double-Stranded Dna ; Prostate-Specific Antigen ; Photoinduced Electron-Transfer ; Europium-Tetracycline Complex ; Sybr-Green-I ; Terbium Complexes ; Optical Probes Reference EPFL-ARTICLE-149396doi:10.1021/cr900362eView record in Web of Science Record created on 2010-06-17, modified on 2017-05-12

2,223 citations


Journal ArticleDOI
08 Jul 2010-Nature
TL;DR: An in-depth investigation of the human SHANK3 locus and its mouse homologue demonstrated that this tissue-specific DNA methylation regulates intragenic promoter activity in vitro and in vivo.
Abstract: Although it is known that the methylation of DNA in 5' promoters suppresses gene expression, the role of DNA methylation in gene bodies is unclear. In mammals, tissue- and cell type-specific methylation is present in a small percentage of 5' CpG island (CGI) promoters, whereas a far greater proportion occurs across gene bodies, coinciding with highly conserved sequences. Tissue-specific intragenic methylation might reduce, or, paradoxically, enhance transcription elongation efficiency. Capped analysis of gene expression (CAGE) experiments also indicate that transcription commonly initiates within and between genes. To investigate the role of intragenic methylation, we generated a map of DNA methylation from the human brain encompassing 24.7 million of the 28 million CpG sites. From the dense, high-resolution coverage of CpG islands, the majority of methylated CpG islands were shown to be in intragenic and intergenic regions, whereas less than 3% of CpG islands in 5' promoters were methylated. The CpG islands in all three locations overlapped with RNA markers of transcription initiation, and unmethylated CpG islands also overlapped significantly with trimethylation of H3K4, a histone modification enriched at promoters. The general and CpG-island-specific patterns of methylation are conserved in mouse tissues. An in-depth investigation of the human SHANK3 locus and its mouse homologue demonstrated that this tissue-specific DNA methylation regulates intragenic promoter activity in vitro and in vivo. These methylation-regulated, alternative transcripts are expressed in a tissue- and cell type-specific manner, and are expressed differentially within a single cell type from distinct brain regions. These results support a major role for intragenic methylation in regulating cell context-specific alternative promoters in gene bodies.

1,610 citations


Journal ArticleDOI
02 Apr 2010-Science
TL;DR: In this article, the authors compared the nanoscale frictional characteristics of atomically thin sheets of graphene, molybdenum disulfide (MoS2), niobium diselenide, and hexagonal boron nitride exfoliated onto a weakly adherent substrate (silicon oxide) to those of their bulk counterparts.
Abstract: Using friction force microscopy, we compared the nanoscale frictional characteristics of atomically thin sheets of graphene, molybdenum disulfide (MoS2), niobium diselenide, and hexagonal boron nitride exfoliated onto a weakly adherent substrate (silicon oxide) to those of their bulk counterparts. Measurements down to single atomic sheets revealed that friction monotonically increased as the number of layers decreased for all four materials. Suspended graphene membranes showed the same trend, but binding the graphene strongly to a mica surface suppressed the trend. Tip-sample adhesion forces were indistinguishable for all thicknesses and substrate arrangements. Both graphene and MoS2 exhibited atomic lattice stick-slip friction, with the thinnest sheets possessing a sliding-length-dependent increase in static friction. These observations, coupled with finite element modeling, suggest that the trend arises from the thinner sheets' increased susceptibility to out-of-plane elastic deformation. The generality of the results indicates that this may be a universal characteristic of nanoscale friction for atomically thin materials weakly bound to substrates.

1,483 citations


Journal ArticleDOI
TL;DR: It is suggested that Parkin, together with PINK1, modulates mitochondrial trafficking, especially to the perinuclear region, a subcellular area associated with autophagy, which may alter mitochondrial turnover which, in turn, may cause the accumulation of defective mitochondria and, ultimately, neurodegeneration in Parkinson's disease.
Abstract: Phosphatase and tensin homolog (PTEN)-induced putative kinase 1 (PINK1) and PARK2/Parkin mutations cause autosomal recessive forms of Parkinson's disease. Upon a loss of mitochondrial membrane potential (DeltaPsi(m)) in human cells, cytosolic Parkin has been reported to be recruited to mitochondria, which is followed by a stimulation of mitochondrial autophagy. Here, we show that the relocation of Parkin to mitochondria induced by a collapse of DeltaPsi(m) relies on PINK1 expression and that overexpression of WT but not of mutated PINK1 causes Parkin translocation to mitochondria, even in cells with normal DeltaPsi(m). We also show that once at the mitochondria, Parkin is in close proximity to PINK1, but we find no evidence that Parkin catalyzes PINK1 ubiquitination or that PINK1 phosphorylates Parkin. However, co-overexpression of Parkin and PINK1 collapses the normal tubular mitochondrial network into mitochondrial aggregates and/or large perinuclear clusters, many of which are surrounded by autophagic vacuoles. Our results suggest that Parkin, together with PINK1, modulates mitochondrial trafficking, especially to the perinuclear region, a subcellular area associated with autophagy. Thus by impairing this process, mutations in either Parkin or PINK1 may alter mitochondrial turnover which, in turn, may cause the accumulation of defective mitochondria and, ultimately, neurodegeneration in Parkinson's disease.

1,440 citations


Journal ArticleDOI
27 Aug 2010-Science
TL;DR: Using a bioengineered substrate to recapitulate key biophysical and biochemical niche features in conjunction with a highly automated single-cell tracking algorithm, it is shown that substrate elasticity is a potent regulator of MuSC fate in culture.
Abstract: Stem cells that naturally reside in adult tissues, such as muscle stem cells (MuSCs), exhibit robust regenerative capacity in vivo that is rapidly lost in culture. Using a bioengineered substrate to recapitulate key biophysical and biochemical niche features in conjunction with a highly automated single-cell tracking algorithm, we show that substrate elasticity is a potent regulator of MuSC fate in culture. Unlike MuSCs on rigid plastic dishes (approximately 10(6) kilopascals), MuSCs cultured on soft hydrogel substrates that mimic the elasticity of muscle (12 kilopascals) self-renew in vitro and contribute extensively to muscle regeneration when subsequently transplanted into mice and assayed histologically and quantitatively by noninvasive bioluminescence imaging. Our studies provide novel evidence that by recapitulating physiological tissue rigidity, propagation of adult muscle stem cells is possible, enabling future cell-based therapies for muscle-wasting diseases.

1,428 citations


Journal ArticleDOI
TL;DR: All tissues and organs were reconstructed as three-dimensional unstructured triangulated surface objects, yielding high precision images of individual features of the body, which greatly enhances the meshing flexibility and the accuracy in comparison with the traditional voxel-based representation of anatomical models.
Abstract: The objective of this study was to develop anatomically correct whole body human models of an adult male (34 years old), an adult female (26 years old) and two children (an 11-year-old girl and a six-year-old boy) for the optimized evaluation of electromagnetic exposure. These four models are referred to as the Virtual Family. They are based on high resolution magnetic resonance (MR) images of healthy volunteers. More than 80 different tissue types were distinguished during the segmentation. To improve the accuracy and the effectiveness of the segmentation, a novel semi-automated tool was used to analyze and segment the data. All tissues and organs were reconstructed as three-dimensional (3D) unstructured triangulated surface objects, yielding high precision images of individual features of the body. This greatly enhances the meshing flexibility and the accuracy with respect to thin tissue layers and small organs in comparison with the traditional voxel-based representation of anatomical models. Conformal computational techniques were also applied. The techniques and tools developed in this study can be used to more effectively develop future models and further improve the accuracy of the models for various applications. For research purposes, the four models are provided for free to the scientific community.

1,347 citations


Journal ArticleDOI
10 Dec 2010-Science
TL;DR: Electromagnetically induced transparency in an optomechanical system whereby the coupling of a cavity to a light pulse is used to control the transmission of light through the cavity may help to allow the engineering of light storage and routing on an optical chip.
Abstract: Electromagnetically induced transparency is a quantum interference effect observed in atoms and molecules, in which the optical response of an atomic medium is controlled by an electromagnetic field. We demonstrated a form of induced transparency enabled by radiation-pressure coupling of an optical and a mechanical mode. A control optical beam tuned to a sideband transition of a micro-optomechanical system leads to destructive interference for the excitation of an intracavity probe field, inducing a tunable transparency window for the probe beam. Optomechanically induced transparency may be used for slowing and on-chip storage of light pulses via microfabricated optomechanical arrays.

Journal ArticleDOI
TL;DR: This paper presents a meta-analyses of Fourier-Transform Profilometry and its applications in 3-D Shape Measurement and Surface Profile Measurement for Structured Light Pattern and 4-Core Optical-Fiber.

Journal ArticleDOI
TL;DR: The layers are found to comprise defect-free graphene areas with sizes of a few nanometers interspersed with defect areas dominated by clustered pentagons and heptagons, which makes all carbon atoms in these defective areas undetectable by spectroscopic techniques.
Abstract: Using high resolution transmission electron microscopy, we identify the specific atomic scale features in chemically derived graphene monolayers that originate from the oxidation-reduction treatment of graphene. The layers are found to comprise defect-free graphene areas with sizes of a few nanometers interspersed with defect areas dominated by clustered pentagons and heptagons. Interestingly, all carbon atoms in these defective areas are bonded to three neighbors maintaining a planar sp(2)-configuration, which makes them undetectable by spectroscopic techniques. Furthermore, we observe that they introduce significant in-plane distortions and strain in the surrounding lattice.

Journal ArticleDOI
TL;DR: The MPRAGE sequence was modified to generate two different images at different inversion times, MP2RAGE, to create T(1)-weighted images where the result image was free of proton density contrast, T(2) contrast, reception bias field, and, to first order, transmit field inhomogeneity.

Journal ArticleDOI
07 Apr 2010-PLOS ONE
TL;DR: Analyzing the motion of approximately 1500 pedestrian groups under natural condition shows that social interactions among group members generate typical group walking patterns that influence crowd dynamics, demonstrating that crowd dynamics is not only determined by physical constraints induced by other pedestrians and the environment, but also significantly by communicative, social interaction among individuals.
Abstract: Human crowd motion is mainly driven by self-organized processes based on local interactions among pedestrians. While most studies of crowd behaviour consider only interactions among isolated individuals, it turns out that up to 70% of people in a crowd are actually moving in groups, such as friends, couples, or families walking together. These groups constitute medium-scale aggregated structures and their impact on crowd dynamics is still largely unknown. In this work, we analyze the motion of approximately 1500 pedestrian groups under natural condition, and show that social interactions among group members generate typical group walking patterns that influence crowd dynamics. At low density, group members tend to walk side by side, forming a line perpendicular to the walking direction. As the density increases, however, the linear walking formation is bent forward, turning it into a V-like pattern. These spatial patterns can be well described by a model based on social communication between group members. We show that the V-like walking pattern facilitates social interactions within the group, but reduces the flow because of its "non-aerodynamic" shape. Therefore, when crowd density increases, the group organization results from a trade-off between walking faster and facilitating social exchange. These insights demonstrate that crowd dynamics is not only determined by physical constraints induced by other pedestrians and the environment, but also significantly by communicative, social interactions among individuals.

Journal ArticleDOI
TL;DR: It would be timely to develop a range of iron bioavailability factors based not only on diet composition but also on subject characteristics, such as iron status and prevalence of obesity.

Journal ArticleDOI
TL;DR: Light-induced water splitting over iron oxide (hematite) has been achieved by using a particle-assisted deposition technique and IrO2-based surface catalysis and these photocurrents are unmatched by any other oxide-based photoanode.
Abstract: Revved-up rust! Light-induced water splitting over iron oxide (hematite) has been achieved by using a particle-assisted deposition technique and IrO2-based surface catalysis. Photocurrents in excess of 3 mA cm-2 were obtained at +1.23 V versus the reversible hydrogen electrode under AM 1.5 G 100 mW cm-2 simulated sunlight. These photocurrents are unmatched by any other oxide-based photoanode. FTO=fluorine-doped tin oxide. Copyright © 2010 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Journal ArticleDOI
TL;DR: This critical review discusses the current understanding of the formation, transport, and merging of drops in microfluidics and focuses on the physical ingredients which determine the flow of Drops in microchannels.
Abstract: This critical review discusses the current understanding of the formation, transport, and merging of drops in microfluidics. We focus on the physical ingredients which determine the flow of drops in microchannels and recall classical results of fluid dynamics which help explain the observed behaviour. We begin by introducing the main physical ingredients that differentiate droplet microfluidics from single-phase microfluidics, namely the modifications to the flow and pressure fields that are introduced by the presence of interfacial tension. Then three practical aspects are studied in detail: (i) The formation of drops and the dominant interactions depending on the geometry in which they are formed. (ii) The transport of drops, namely the evaluation of drop velocity, the pressure-velocity relationships, and the flow field induced by the presence of the drop. (iii) The fusion of two drops, including different methods of bridging the liquid film between them which enables their merging.

Journal ArticleDOI
TL;DR: Mesoporous hematite photoelectodes prepared by a solution-based colloidal method which yield water-splitting photocurrents of 0.56 mA cm(-2) under standard conditions and a considerable change in the absorption coefficient and onset properties, critical aspects for hematites as a solar energy converter, as a function of the sintering temperature are revealed.
Abstract: Sustainable hydrogen production through photoelectrochemical water splitting using hematite (α-Fe2O3) is a promising approach for the chemical storage of solar energy, but is complicated by the material’s nonoptimal optoelectronic properties. Nanostructuring approaches have been shown to increase the performance of hematite, but the ideal nanostructure giving high efficiencies for all absorbed light wavelengths remains elusive. Here, we report for the first time mesoporous hematite photoelectodes prepared by a solution-based colloidal method which yield water-splitting photocurrents of 0.56 mA cm−2 under standard conditions (AM 1.5G 100 mW cm−2, 1.23 V vs reversible hydrogen electrode, RHE) and over 1.0 mA cm−2 before the dark current onset (1.55 V vs RHE). The sintering temperature is found to increase the average particle size, and have a drastic effect on the photoactivity. X-ray photoelectron spectroscopy and magnetic measurements using a SQUID magnetometer link this effect to the diffusion and incorp...

Journal ArticleDOI
24 May 2010-ACS Nano
TL;DR: In this article, the Schottky device was optimized and explained in terms of a depletion region driving electron−hole pair separation on the semiconductor side of a junction between an opaque low-work-function metal and a p-type CQD film.
Abstract: Colloidal quantum dot (CQD) photovoltaics combine low-cost solution processability with quantum size-effect tunability to match absorption with the solar spectrum. Rapid recent advances in CQD photovoltaics have led to impressive 3.6% AM1.5 solar power conversion efficiencies. Two distinct device architectures and operating mechanisms have been advanced. The first—the Schottky device—was optimized and explained in terms of a depletion region driving electron−hole pair separation on the semiconductor side of a junction between an opaque low-work-function metal and a p-type CQD film. The second—the excitonic device—employed a CQD layer atop a transparent conductive oxide (TCO) and was explained in terms of diffusive exciton transport via energy transfer followed by exciton separation at the type-II heterointerface between the CQD film and the TCO. Here we fabricate CQD photovoltaic devices on TCOs and show that our devices rely on the establishment of a depletion region for field-driven charge transport and...

Journal ArticleDOI
TL;DR: This paper focuses on the prospect of improving the lives of countless disabled individuals through a combination of BCI technology with existing assistive technologies (AT) and identifies four application areas where disabled individuals could greatly benefit from advancements inBCI technology, namely, “Communication and Control”, ‘Motor Substitution’, ”Entertainment” and “Motor Recovery”.
Abstract: In recent years, new research has brought the field of electroencephalogram (EEG)-based brain–computer interfacing (BCI) out of its infancy and into a phase of relative maturity through many demonstrated prototypes such as brain-controlled wheelchairs, keyboards, and computer games. With this proof-of-concept phase in the past, the time is now ripe to focus on the development of practical BCI technologies that can be brought out of the lab and into real-world applications. In particular, we focus on the prospect of improving the lives of countless disabled individuals through a combination of BCI technology with existing assistive technologies (AT). In pursuit of more practical BCIs for use outside of the lab, in this paper, we identify four application areas where disabled individuals could greatly benefit from advancements in BCI technology, namely, “Communication and Control”, “Motor Substitution”, “Entertainment”, and “Motor Recovery”. We review the current state of the art and possible future developments, while discussing the main research issues in these four areas. In particular, we expect the most progress in the development of technologies such as hybrid BCI architectures, user–machine adaptation algorithms, the exploitation of users’ mental states for BCI reliability and confidence measures, the incorporation of principles in human–computer interaction (HCI) to improve BCI usability, and the development of novel BCI technology including better EEG devices.

Journal ArticleDOI
12 May 2010-PLOS ONE
TL;DR: It is shown that a first person perspective of a life-sized virtual human female body that appears to substitute the male subjects' own bodies was sufficient to generate a body transfer illusion, supporting the notion that bottom-up perceptual mechanisms can temporarily override top down knowledge resulting in a radical illusion of transfer of body ownership.
Abstract: BACKGROUND: Altering the normal association between touch and its visual correlate can result in the illusory perception of a fake limb as part of our own body. Thus, when touch is seen to be applied to a rubber hand while felt synchronously on the corresponding hidden real hand, an illusion of ownership of the rubber hand usually occurs. The illusion has also been demonstrated using visuomotor correlation between the movements of the hidden real hand and the seen fake hand. This type of paradigm has been used with respect to the whole body generating out-of-the-body and body substitution illusions. However, such studies have only ever manipulated a single factor and although they used a form of virtual reality have not exploited the power of immersive virtual reality (IVR) to produce radical transformations in body ownership. PRINCIPAL FINDINGS: Here we show that a first person perspective of a life-sized virtual human female body that appears to substitute the male subjects' own bodies was sufficient to generate a body transfer illusion. This was demonstrated subjectively by questionnaire and physiologically through heart-rate deceleration in response to a threat to the virtual body. This finding is in contrast to earlier experimental studies that assume visuotactile synchrony to be the critical contributory factor in ownership illusions. Our finding was possible because IVR allowed us to use a novel experimental design for this type of problem with three independent binary factors: (i) perspective position (first or third), (ii) synchronous or asynchronous mirror reflections and (iii) synchrony or asynchrony between felt and seen touch. CONCLUSIONS: The results support the notion that bottom-up perceptual mechanisms can temporarily override top down knowledge resulting in a radical illusion of transfer of body ownership. The research also illustrates immersive virtual reality as a powerful tool in the study of body representation and experience, since it supports experimental manipulations that would otherwise be infeasible, with the technology being mature enough to represent human bodies and their motion.

Journal ArticleDOI
TL;DR: The results of this community-wide experiment show that reliable network inference from gene expression data remains an unsolved problem, and they indicate potential ways of network reconstruction improvements.
Abstract: Numerous methods have been developed for inferring gene regulatory networks from expression data, however, both their absolute and comparative performance remain poorly understood. In this paper, we introduce a framework for critical performance assessment of methods for gene network inference. We present an in silico benchmark suite that we provided as a blinded, community-wide challenge within the context of the DREAM (Dialogue on Reverse Engineering Assessment and Methods) project. We assess the performance of 29 gene-network-inference methods, which have been applied independently by participating teams. Performance profiling reveals that current inference methods are affected, to various degrees, by different types of systematic prediction errors. In particular, all but the best-performing method failed to accurately infer multiple regulatory inputs (combinatorial regulation) of genes. The results of this community-wide experiment show that reliable network inference from gene expression data remains an unsolved problem, and they indicate potential ways of network reconstruction improvements.

Journal ArticleDOI
TL;DR: A greatly enhanced photovoltaic performance is observed when the porphyrin dye is cosensitized with a metal-free dye that has a complementary spectral response.
Abstract: To dye for: A porphyrin chromophore, which is integrated into a donor-acceptor dye as a π-conjugated bridge (see picture), exhibits an unprecedented efficiency of 11 □ % when used as a photosensitizer in a double-layer TiO2 film. A greatly enhanced photovoltaic performance is observed when the porphyrin dye is cosensitized with a metal-free dye that has a complementary spectral response. © 2010 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Journal ArticleDOI
TL;DR: It is concluded that AMPK acts as the primordial trigger for fasting- and exercise-induced adaptations in skeletal muscle and that activation of SIRT1 and its downstream signaling pathways are improperly triggered in AMPK-deficient states.

Journal ArticleDOI
TL;DR: An integrated view on the pathways that control NAD(+) production and cycling, as well as its cellular compartmentalization, and novel data that show how modulation of NAD(+)-producing and -consuming pathways have a major physiological impact and hold promise for the prevention and treatment of metabolic disease are provided.
Abstract: A century after the identification of a coenzymatic activity for NAD(+), NAD(+) metabolism has come into the spotlight again due to the potential therapeutic relevance of a set of enzymes whose activity is tightly regulated by the balance between the oxidized and reduced forms of this metabolite. In fact, the actions of NAD(+) have been extended from being an oxidoreductase cofactor for single enzymatic activities to acting as substrate for a wide range of proteins. These include NAD(+)-dependent protein deacetylases, poly(ADP-ribose) polymerases, and transcription factors that affect a large array of cellular functions. Through these effects, NAD(+) provides a direct link between the cellular redox status and the control of signaling and transcriptional events. Of particular interest within the metabolic/endocrine arena are the recent results, which indicate that the regulation of these NAD(+)-dependent pathways may have a major contribution to oxidative metabolism and life span extension. In this review, we will provide an integrated view on: 1) the pathways that control NAD(+) production and cycling, as well as its cellular compartmentalization; 2) the signaling and transcriptional pathways controlled by NAD(+); and 3) novel data that show how modulation of NAD(+)-producing and -consuming pathways have a major physiological impact and hold promise for the prevention and treatment of metabolic disease.

Book
01 Jan 2010
TL;DR: In this article, the authors present a model for wireless ad-hoc networks with a view of 4G wireless: Imperatives and challenges. But the authors do not discuss the security aspects of ad hoc networks.
Abstract: Contributors.Preface.1. Mobile Ad-Hoc networking with a View of 4G Wireless: Imperatives and Challenges (J. Liu & I. Chlamtac).2. Off-the-Shelf Enables of Ad Hoc Networks (G. Zaruba & S. Das).3. IEEE 802.11 in Ad Hoc Networks: Protocols, Performance and Open Issues (G. Anastasi, et al.).4. Scatternet Formation in Bluetooth Networks (S. Basagni, et al.).5. Antenna Beamforming and Power Control for Ad Hoc Networks (R. Ramanathan).6. Topology Control in Wireless Ad Hoc Networks (X. Li).7. Broadcasting and Activity Scheduling in Ad Hoc Networks (I. Stojmenovic & J. Wu).8. Location Discovery (A. Savvidesn & M. Srivastava).9. Mobile Ad Hoc Networks (MANETs): Routing Technology for Dynamic, Wireless Networking (J. Macker & M. Corson).10. Routing Approaches in Mobile Ad Hoc Networks (E. Belding-Royer).11. Energy-Efficient Communication in Ad Hoc Wireless Networks (L. Feeney).12. Ad Hoc Networks Security (P. Michiardi & R. Molva).13. Self-Organized and Cooperative Ad Hoc Networking (S. Giordano & A. Urpi).14. Simulation and Modeling of Wireless, Mobile, and Ad Hoc Networks (A. Boukerche & L. Bononi).15. Modeling Cross-Layering Interaction Using Inverse Optimization (V. Syrotiuk & A.Bikki).16. Algorithmic Challenges in Ad Hoc Networks (A. Farago).Index.About the Editors.

Journal ArticleDOI
Leming Shi1, Gregory Campbell1, Wendell D. Jones, Fabien Campagne2  +198 moreInstitutions (55)
TL;DR: P predictive models for classifying a sample with respect to one of 13 endpoints indicative of lung or liver toxicity in rodents, or of breast cancer, multiple myeloma or neuroblastoma in humans are generated.
Abstract: Gene expression data from microarrays are being applied to predict preclinical and clinical endpoints, but the reliability of these predictions has not been established. In the MAQC-II project, 36 independent teams analyzed six microarray data sets to generate predictive models for classifying a sample with respect to one of 13 endpoints indicative of lung or liver toxicity in rodents, or of breast cancer, multiple myeloma or neuroblastoma in humans. In total, >30,000 models were built using many combinations of analytical methods. The teams generated predictive models without knowing the biological meaning of some of the endpoints and, to mimic clinical reality, tested the models on data that had not been used for training. We found that model performance depended largely on the endpoint and team proficiency and that different approaches generated models of similar performance. The conclusions and recommendations from MAQC-II should be useful for regulatory agencies, study committees and independent investigators that evaluate methods for global gene expression analysis.

Proceedings ArticleDOI
14 Mar 2010
TL;DR: The goal in this paper is to obtain a representative (unbiased) sample of Facebook users by crawling its social graph using several candidate techniques, and introduces online formal convergence diagnostics to assess sample quality during the data collection process.
Abstract: With more than 250 million active users, Facebook (FB) is currently one of the most important online social networks. Our goal in this paper is to obtain a representative (unbiased) sample of Facebook users by crawling its social graph. In this quest, we consider and implement several candidate techniques. Two approaches that are found to perform well are the Metropolis-Hasting random walk (MHRW) and a re-weighted random walk (RWRW). Both have pros and cons, which we demonstrate through a comparison to each other as well as to the "ground-truth" (UNI - obtained through true uniform sampling of FB userIDs). In contrast, the traditional Breadth-First-Search (BFS) and Random Walk (RW) perform quite poorly, producing substantially biased results. In addition to offline performance assessment, we introduce online formal convergence diagnostics to assess sample quality during the data collection process. We show how these can be used to effectively determine when a random walk sample is of adequate size and quality for subsequent use (i.e., when it is safe to cease sampling). Using these methods, we collect the first, to the best of our knowledge, unbiased sample of Facebook. Finally, we use one of our representative datasets, collected through MHRW, to characterize several key properties of Facebook.

Journal ArticleDOI
TL;DR: In this paper, the authors distill the salient advances of recent origin, particularly those that challenge textbook orthodoxy, and highlight some of the outstanding questions, such as the extent of the logarithmic overlap layer, the universality or otherwise of the principal model parameters, and the scaling of mean flow and Reynolds stresses.
Abstract: Wall-bounded turbulent flows at high Reynolds numbers have become an increasingly active area of research in recent years. Many challenges remain in theory, scaling, physical understanding, experimental techniques, and numerical simulations. In this paper we distill the salient advances of recent origin, particularly those that challenge textbook orthodoxy. Some of the outstanding questions, such as the extent of the logarithmic overlap layer, the universality or otherwise of the principal model parameters such as the von Karman “constant,” the parametrization of roughness effects, and the scaling of mean flow and Reynolds stresses, are highlighted. Research avenues that may provide answers to these questions, notably the improvement of measuring techniques and the construction of new facilities, are identified. We also highlight aspects where differences of opinion persist, with the expectation that this discussion might mark the beginning of their resolution.