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Showing papers by "Environmental Molecular Sciences Laboratory published in 2020"


Journal ArticleDOI
TL;DR: Wang et al. as discussed by the authors developed an electrolyte strategy to enable the use of commercially available microsized alloys, such as Si-Li, as high-performance battery anodes, and demonstrated that a rationally designed electrolyte (2.0 M LiPF6 in 1:1 v/v mixture of tetrahydrofuran and 2-methyltetrahydroidfuran) enables 100 cycles of full cells that contain microsized Si, Al and Bi anodes with commercial LiFePO4 and LiNi0.8Co
Abstract: Lithium batteries with Si, Al or Bi microsized (>10 µm) particle anodes promise a high capacity, ease of production, low cost and low environmental impact, yet they suffer from fast degradation and a low Coulombic efficiency. Here we demonstrate that a rationally designed electrolyte (2.0 M LiPF6 in 1:1 v/v mixture of tetrahydrofuran and 2-methyltetrahydrofuran) enables 100 cycles of full cells that contain microsized Si, Al and Bi anodes with commercial LiFePO4 and LiNi0.8Co0.15Al0.05O2 cathodes. Alloy anodes with areal capacities of more than 2.5 mAh cm−2 achieved >300 cycles with a high initial Coulombic efficiency of >90% and average Coulombic efficiency of >99.9%. These improvements are facilitated by the formation of a high-modulus LiF–organic bilayer interphase, in which LiF possesses a high interfacial energy with the alloy anode to accommodate plastic deformation of the lithiated alloy during cycling. This work provides a simple yet practical solution to current battery technology without any binder modification or special fabrication methods. Chunsheng Wang and colleagues develop an electrolyte strategy to enable the use of commercially available microsized alloys, such as Si–Li, as high-performance battery anodes. They ascribe its success to the formation of robust LiF-rich layers as the solid–electrolyte interface.

474 citations


Journal ArticleDOI
01 Dec 2020
TL;DR: In this paper, an atomically dispersed Co and N co-doped carbon (CoN4C12) catalyst with porphyrin-like sites is reported with an improved activity and durability in PEM fuel cell conditions.
Abstract: The development of catalysts free of platinum-group metals and with both a high activity and durability for the oxygen reduction reaction in proton exchange membrane fuel cells is a grand challenge. Here we report an atomically dispersed Co and N co-doped carbon (Co–N–C) catalyst with a high catalytic oxygen reduction reaction activity comparable to that of a similarly synthesized Fe–N–C catalyst but with a four-time enhanced durability. The Co–N–C catalyst achieved a current density of 0.022 A cm−2 at 0.9 ViR-free (internal resistance-compensated voltage) and peak power density of 0.64 W cm−2 in 1.0 bar H2/O2 fuel cells, higher than that of non-iron platinum-group-metal-free catalysts reported in the literature. Importantly, we identified two main degradation mechanisms for metal (M)–N–C catalysts: catalyst oxidation by radicals and active-site demetallation. The enhanced durability of Co–N–C relative to Fe–N–C is attributed to the lower activity of Co ions for Fenton reactions that produce radicals from the main oxygen reduction reaction by-product, H2O2, and the significantly enhanced resistance to demetallation of Co–N–C. Platinum-group-metal-free, non-iron catalysts are highly desirable for the oxygen reduction reaction at proton exchange membrane (PEM) fuel cell cathodes, as they avoid the detrimental Fenton reactions. Now, a cobalt and nitrogen co-doped carbon catalyst with atomically dispersed porphyrin-like CoN4C12 sites is reported with an improved activity and durability in PEM fuel cell conditions.

335 citations


Journal ArticleDOI
TL;DR: In this article, a single-crystalline LiNi0.83Co0.11Mn0.06O2 (SC-NCM) with primary particles of 3-6-μm diameter is developed and comprehensively investigated, which exhibits superior cycling performance at both room temperature and elevated temperature (55 °C).

327 citations


Journal ArticleDOI
TL;DR: H hierarchical porous CNT@Si@C microspheres are constructed as anodes for Li-ion batteries, enabling both high electrochemical performance and excellent mechanical strength, and provides insights into the design of electrode materials for other batteries.
Abstract: Porous structured silicon has been regarded as a promising candidate to overcome pulverization of silicon-based anodes. However, poor mechanical strength of these porous particles has limited their volumetric energy density towards practical applications. Here we design and synthesize hierarchical carbon-nanotube@silicon@carbon microspheres with both high porosity and extraordinary mechanical strength (>200 MPa) and a low apparent particle expansion of ~40% upon full lithiation. The composite electrodes of carbon-nanotube@silicon@carbon-graphite with a practical loading (3 mAh cm−2) deliver ~750 mAh g−1 specific capacity, 92% capacity retention over 500 cycles. This work is a leap in silicon anode development and provides insights into the design of electrode materials for other batteries. The authors here construct hierarchical porous CNT@Si@C microspheres as anodes for Li-ion batteries, enabling both high electrochemical performance and excellent mechanical strength. The work highlights the importance of mechanical properties in developing battery materials for practical applications.

254 citations


Journal ArticleDOI
TL;DR: An operando mass spectrometry technique is presented, along with molecular dynamics simulations, that unveils the evolution of the solid–electrolyte interphase chemistry and structure in lithium-ion batteries during the first cycle.
Abstract: The solid–electrolyte interphase (SEI) dictates the performance of most batteries, but the understanding of its chemistry and structure is limited by the lack of in situ experimental tools. In this work, we present a dynamic picture of the SEI formation in lithium-ion batteries using in operando liquid secondary ion mass spectrometry in combination with molecular dynamics simulations. We find that before any interphasial chemistry occurs (during the initial charging), an electric double layer forms at the electrode/electrolyte interface due to the self-assembly of solvent molecules. The formation of the double layer is directed by Li+ and the electrode surface potential. The structure of this double layer predicts the eventual interphasial chemistry; in particular, the negatively charged electrode surface repels salt anions from the inner layer and results in an inner SEI that is thin, dense and inorganic in nature. It is this dense layer that is responsible for conducting Li+ and insulating electrons, the main functions of the SEI. An electrolyte-permeable and organic-rich outer layer appears after the formation of the inner layer. In the presence of a highly concentrated, fluoride-rich electrolyte, the inner SEI layer has an elevated concentration of LiF due to the presence of anions in the double layer. These real-time nanoscale observations will be helpful in engineering better interphases for future batteries. An operando mass spectrometry technique, along with molecular dynamics simulations, unveils the evolution of the solid–electrolyte interphase chemistry and structure in lithium-ion batteries during the first cycle.

234 citations


Journal ArticleDOI
TL;DR: In this article, a series of localized high-concentration electrolytes (LHCEs) with model electrolyte solvents (carbonate, sulfone, phosphate, and ether) were systematically studied to investigate the correlation between the reactive characteristics of the inner solvation sheath on electrode surfaces due to their unique solvation structures.
Abstract: Functional electrolyte is the key to stabilize the highly reductive lithium (Li) metal anode and the high-voltage cathode for long-life, high-energy-density rechargeable Li metal batteries (LMBs). However, fundamental mechanisms on the interactions between reactive electrodes and electrolytes are still not well understood. Recently localized high-concentration electrolytes (LHCEs) are emerging as a promising electrolyte design strategy for LMBs. Here, we use LHCEs as an ideal platform to investigate the fundamental correlation between the reactive characteristics of the inner solvation sheath on electrode surfaces due to their unique solvation structures. The effects of a series of LHCEs with model electrolyte solvents (carbonate, sulfone, phosphate, and ether) on the stability of high-voltage LMBs are systematically studied. The stabilities of electrodes in different LHCEs indicate the intrinsic synergistic effects between the salt and the solvent when they coexist on electrode surfaces. Experimental and theoretical analyses reveal an intriguing general rule that the strong interactions between the salt and the solvent in the inner solvation sheath promote their intermolecular proton/charge transfer reactions, which dictates the properties of the electrode/electrolyte interphases and thus the battery performances.

153 citations


Journal ArticleDOI
TL;DR: An automated approach to imaging that utilizes label-free nanoproteomics to analyze tissue voxels, generating quantitative cell-type-specific images for >2000 proteins with 100-µm spatial resolution across mouse uterine tissue sections preparing for blastocyst implantation is demonstrated.
Abstract: Biological tissues exhibit complex spatial heterogeneity that directs the functions of multicellular organisms. Quantifying protein expression is essential for elucidating processes within complex biological assemblies. Imaging mass spectrometry (IMS) is a powerful emerging tool for mapping the spatial distribution of metabolites and lipids across tissue surfaces, but technical challenges have limited the application of IMS to the analysis of proteomes. Methods for probing the spatial distribution of the proteome have generally relied on the use of labels and/or antibodies, which limits multiplexing and requires a priori knowledge of protein targets. Past efforts to make spatially resolved proteome measurements across tissues have had limited spatial resolution and proteome coverage and have relied on manual workflows. Here, we demonstrate an automated approach to imaging that utilizes label-free nanoproteomics to analyze tissue voxels, generating quantitative cell-type-specific images for >2000 proteins with 100-µm spatial resolution across mouse uterine tissue sections preparing for blastocyst implantation.

150 citations



Journal ArticleDOI
TL;DR: The improved Boosting to Amplify Signal with Isobaric Labeling (iBASIL) strategy allows for precise and robust quantitative single-cell proteomics, and highlights the importance of carefully evaluating and optimizing the boosting ratios and MS data acquisition conditions for achieving robust, comprehensive proteomic analysis of single cells.

123 citations


Journal ArticleDOI
TL;DR: Improved single-cell proteome coverage is reported through the combination of the previously developed Nanodroplet Processing in One Pot for Trace Samples (nanoPOTS) platform with further miniaturization of liquid chromatography (LC) separations and implementation of an ultrasensitive latest-generation mass spectrometer.
Abstract: Single-cell proteomics can provide unique insights into biological processes by resolving heterogeneity that is obscured by bulk measurements. Gains in the overall sensitivity and proteome coverage...

120 citations



Journal ArticleDOI
TL;DR: It is suggested that one cell, infected versus uninfected, can have immensely different metabolisms that affect the ecosystem differently, and related phage–host genome complementarity, virocell metabolic reprogramming, and viral fitness in a conceptual model to guide incorporating viruses into ecosystem models are related.
Abstract: Ocean viruses are abundant and infect 20-40% of surface microbes. Infected cells, termed virocells, are thus a predominant microbial state. Yet, virocells and their ecosystem impacts are understudied, thus precluding their incorporation into ecosystem models. Here we investigated how unrelated bacterial viruses (phages) reprogram one host into contrasting virocells with different potential ecosystem footprints. We independently infected the marine Pseudoalteromonas bacterium with siphovirus PSA-HS2 and podovirus PSA-HP1. Time-resolved multi-omics unveiled drastically different metabolic reprogramming and resource requirements by each virocell, which were related to phage-host genomic complementarity and viral fitness. Namely, HS2 was more complementary to the host in nucleotides and amino acids, and fitter during infection than HP1. Functionally, HS2 virocells hardly differed from uninfected cells, with minimal host metabolism impacts. HS2 virocells repressed energy-consuming metabolisms, including motility and translation. Contrastingly, HP1 virocells substantially differed from uninfected cells. They repressed host transcription, responded to infection continuously, and drastically reprogrammed resource acquisition, central carbon and energy metabolisms. Ecologically, this work suggests that one cell, infected versus uninfected, can have immensely different metabolisms that affect the ecosystem differently. Finally, we relate phage-host genome complementarity, virocell metabolic reprogramming, and viral fitness in a conceptual model to guide incorporating viruses into ecosystem models.

Journal ArticleDOI
TL;DR: By encapsulating nanoparticles of metallic tin in mechanically robust graphene tubes, this work shows tin anodes with high volumetric and gravimetric capacities, high rate performance, and long cycling life, and provides an effective route towards lithium-ion batteries with high energy density for a broad range of applications.
Abstract: Limited by the size of microelectronics, as well as the space of electrical vehicles, there are tremendous demands for lithium-ion batteries with high volumetric energy densities. Current lithium-ion batteries, however, adopt graphite-based anodes with low tap density and gravimetric capacity, resulting in poor volumetric performance metric. Here, by encapsulating nanoparticles of metallic tin in mechanically robust graphene tubes, we show tin anodes with high volumetric and gravimetric capacities, high rate performance, and long cycling life. Pairing with a commercial cathode material LiNi0.6Mn0.2Co0.2O2, full cells exhibit a gravimetric and volumetric energy density of 590 W h Kg-1 and 1,252 W h L-1, respectively, the latter of which doubles that of the cell based on graphite anodes. This work provides an effective route towards lithium-ion batteries with high energy density for a broad range of applications.

Journal ArticleDOI
TL;DR: In this article, the active sites for supported precious metals with atomic dispersion are investigated in the context of catalysis due to their potentials in achieving maximum atom efficiency and unique reactivities.
Abstract: Supported precious metals with atomic dispersion are of great interest in catalysis due to their potentials in achieving maximum atom efficiency and unique reactivities. Herein, the active sites fo...

Journal ArticleDOI
TL;DR: In this article, the uptake of polystyrene nano-and microparticles by plant roots was investigated by laser scanning confocal microscopy and pyrolysis gas chromatography-mass spectrometry (GC-MS).
Abstract: Association of plastic particles with plant roots could represent a pathway for human consumption of plastic and plastic-associated organic contaminants. Here, we investigated the uptake of spherical, negatively-charged, polystyrene nano- and microparticles by plant roots. We used negatively-charged, 40 nm and 1 μm fluorescently-labeled polystyrene spheres and two plant species: Arabidopsis (Arabidopsis thaliana) and wheat (Triticum aestivum). Plants were grown from seeds to 5 days for wheat and 12 days for Arabidopsis, in agar growth media containing plastic spheres (0.029 g L−1), and plant uptake of spheres was investigated by laser scanning confocal microscopy and pyrolysis gas chromatography-mass spectrometry (GC-MS). The confocal images of both plant species showed no evidence for active uptake of nano- and microsized polystyrene spheres during plant growth up to the 1 to 2 leaf growth stage. Pyrolysis GC-MS was unsuccessful because of the occurrence of natural styrene monomers in plant roots and insufficient detection limits. Both 40 nm and 1 μm polystyrene spheres accumulated at the root surface of each species, particularly at the root tip, and were still found attached to the root surface after washing. However, there was no evidence of plastic particles in the internal root structure. Our results demonstrate the association and accumulation of plastics at root surface and cap cells.

Journal ArticleDOI
TL;DR: This work points out a promising approach for developing Li||LCO batteries for practical applications and can also be used to improve the high-voltage performance of other batteries in a broad temperature range.
Abstract: High-energy-density batteries with a LiCoO2 (LCO) cathode are of significant importance to the energy-storage market, especially for portable electronics. However, their development is greatly limited by the inferior performance under high voltages and challenging temperatures. Here, highly stable lithium (Li) metal batteries with LCO cathode, through the design of in situ formed, stable electrode/electrolyte interphases on both the Li anode and the LCO cathode, with an advanced electrolyte, are reported. The LCO cathode can deliver a high specific capacity of ≈190 mAh g-1 and show greatly improved cell performances under a high charge voltage of 4.5 V (even up to 4.55 V) and a wide temperature range from -30 to 55 °C. This work points out a promising approach for developing Li||LCO batteries for practical applications. This approach can also be used to improve the high-voltage performance of other batteries in a broad temperature range.

Journal ArticleDOI
TL;DR: Application of an electrical field to Geobacter sulfurreducens biofilms stimulates production of OmcZ nanowires, which undergo a pH-induced conformational switch that causes increased stiffness and conductivity due to enhanced heme group π-stacking, which may help to guide the development of seamless, bidirectional interfaces between biological and electronic systems.
Abstract: Multifunctional living materials are attractive due to their powerful ability to self-repair and replicate. However, most natural materials lack electronic functionality. Here we show that an electric field, applied to electricity-producing Geobacter sulfurreducens biofilms, stimulates production of cytochrome OmcZ nanowires with 1,000-fold higher conductivity (30 S cm−1) and threefold higher stiffness (1.5 GPa) than the cytochrome OmcS nanowires that are important in natural environments. Using chemical imaging-based multimodal nanospectroscopy, we correlate protein structure with function and observe pH-induced conformational switching to β-sheets in individual nanowires, which increases their stiffness and conductivity by 100-fold due to enhanced π-stacking of heme groups; this was further confirmed by computational modeling and bulk spectroscopic studies. These nanowires can transduce mechanical and chemical stimuli into electrical signals to perform sensing, synthesis and energy production. These findings of biologically produced, highly conductive protein nanowires may help to guide the development of seamless, bidirectional interfaces between biological and electronic systems. Application of an electrical field to Geobacter sulfurreducens biofilms stimulates production of OmcZ nanowires, which undergo a pH-induced conformational switch that causes increased stiffness and conductivity due to enhanced heme group π-stacking.

Journal ArticleDOI
TL;DR: A nanoPOTS autosampler allowing fully automated sample injection from nanowells to LC-MS systems and a sample drying, extraction, and loading workflow to enable reproducible and reliable sample injection are developed.
Abstract: Single-cell proteomics can provide critical biological insight into the cellular heterogeneity that is masked by bulk-scale analysis. We have developed a nanoPOTS (nanodroplet processing in one pot for trace samples) platform and demonstrated its broad applicability for single-cell proteomics. However, because of nanoliter-scale sample volumes, the nanoPOTS platform is not compatible with automated LC-MS systems, which significantly limits sample throughput and robustness. To address this challenge, we have developed a nanoPOTS autosampler allowing fully automated sample injection from nanowells to LC-MS systems. We also developed a sample drying, extraction, and loading workflow to enable reproducible and reliable sample injection. The sequential analysis of 20 samples containing 10 ng tryptic peptides demonstrated high reproducibility with correlation coefficients of >0.995 between any two samples. The nanoPOTS autosampler can provide analysis throughput of 9.6, 16, and 24 single cells per day using 120, 60, and 30 min LC gradients, respectively. As a demonstration for single-cell proteomics, the autosampler was first applied to profiling protein expression in single MCF10A cells using a label-free approach. At a throughput of 24 single cells per day, an average of 256 proteins was identified from each cell and the number was increased to 731 when the Match Between Runs algorithm of MaxQuant was used. Using a multiplexed isobaric labeling approach (TMT-11plex), ∼77 single cells could be analyzed per day. We analyzed 152 cells from three acute myeloid leukemia cell lines, resulting in a total of 2558 identified proteins with 1465 proteins quantifiable (70% valid values) across the 152 cells. These data showed quantitative single-cell proteomics can cluster cells to distinct groups and reveal functionally distinct differences.

Journal ArticleDOI
TL;DR: The sodium ion battery (NIB) is a promising alternative technology for energy storage systems because of the abundance and low cost of sodium in the Earth’s crust.
Abstract: The sodium ion battery (NIB) is a promising alternative technology for energy storage systems because of the abundance and low cost of sodium in the Earth’s crust. However, the limited cycle life a...

Journal ArticleDOI
TL;DR: While this work is written primarily from a mass spectrometry perspective, it is targeted to all bioanalytical scientists who are interested in applying these methods to their own biochemistry and chemical biology research.
Abstract: In biology, it can be argued that if the genome contains the script for a cell's life cycle, then the proteome constitutes an ensemble cast of actors that brings these instructions to life. Their interactions with each other, co-factors, ligands, substrates, and so on, are key to understanding nearly any biological process. Mass spectrometry is well established as the method of choice to determine protein primary structure and location of post-translational modifications. In recent years, top-down fragmentation of intact proteins has been increasingly combined with ionisation of noncovalent assemblies under non-denaturing conditions, i.e., native mass spectrometry. Sequence, post-translational modifications, ligand/metal binding, protein folding, and complex stoichiometry can thus all be probed directly. Here, we review recent developments in this new and exciting field of research. While this work is written primarily from a mass spectrometry perspective, it is targeted to all bioanalytical scientists who are interested in applying these methods to their own biochemistry and chemical biology research.

Journal ArticleDOI
TL;DR: This work proposes a mechanism for extracellular nutrient acquisition from aromatic compounds by soil bacteria, which holds promise for improving the efficiency of microbial lignin conversion and suggests that OMVs could potentially be useful tools for synthetic biology and biotechnological applications.
Abstract: Lignin is an abundant and recalcitrant component of plant cell walls. While lignin degradation in nature is typically attributed to fungi, growing evidence suggests that bacteria also catabolize this complex biopolymer. However, the spatiotemporal mechanisms for lignin catabolism remain unclear. Improved understanding of this biological process would aid in our collective knowledge of both carbon cycling and microbial strategies to valorize lignin to value-added compounds. Here, we examine lignin modifications and the exoproteome of three aromatic–catabolic bacteria: Pseudomonas putida KT2440, Rhodoccocus jostii RHA1, and Amycolatopsis sp. ATCC 39116. P. putida cultivation in lignin-rich media is characterized by an abundant exoproteome that is dynamically and selectively packaged into outer membrane vesicles (OMVs). Interestingly, many enzymes known to exhibit activity toward lignin-derived aromatic compounds are enriched in OMVs from early to late stationary phase, corresponding to the shift from bioavailable carbon to oligomeric lignin as a carbon source. In vivo and in vitro experiments demonstrate that enzymes contained in the OMVs are active and catabolize aromatic compounds. Taken together, this work supports OMV-mediated catabolism of lignin-derived aromatic compounds as an extracellular strategy for nutrient acquisition by soil bacteria and suggests that OMVs could potentially be useful tools for synthetic biology and biotechnological applications.

Journal ArticleDOI
TL;DR: This work explores the size dependence of both crystal and electronic properties of CeO2 nanoparticles (NPs) with different sizes by state-of-the art spectroscopic techniques and demonstrates that the as-synthesized NPs crystallize in the fluorite structure and they are predominantly composed of CeIV ions.
Abstract: Intrinsic properties of a compound (e.g., electronic structure, crystallographic structure, optical and magnetic properties) define notably its chemical and physical behavior. In the case of nanomaterials, these fundamental properties depend on the occurrence of quantum mechanical size effects and on the considerable increase of the surface to bulk ratio. Here, we explore the size dependence of both crystal and electronic properties of CeO2 nanoparticles (NPs) with different sizes by state-of-the art spectroscopic techniques. X-ray diffraction, X-ray photoelectron spectroscopy, and high-energy resolution fluorescence-detection hard X-ray absorption near-edge structure (HERFD-XANES) spectroscopy demonstrate that the as-synthesized NPs crystallize in the fluorite structure and they are predominantly composed of CeIV ions. The strong dependence of the lattice parameter with the NPs size was attributed to the presence of adsorbed species at the NPs surface thanks to Fourier transform infrared spectroscopy and thermogravimetric analysis measurements. In addition, the size dependence of the t2g states in the Ce LIII XANES spectra was experimentally observed by HERFD-XANES and confirmed by theoretical calculations.


Posted ContentDOI
04 Jun 2020-bioRxiv
TL;DR: Differential analysis of single microdissected motor neurons and interneurons from human spinal tissue indicated a similar level of proteome coverage, and the two subpopulations of cells were readily differentiated based on single-cell label-free quantification.
Abstract: We report on the combination of nanodroplet sample preparation, ultra-low-flow nanoLC, high-field asymmetric ion mobility spectrometry (FAIMS), and the latest-generation Orbitrap Eclipse Tribrid mass spectrometer for greatly improved single-cell proteome profiling. FAIMS effectively filtered out singly charged ions for more effective MS analysis of multiply charged peptides, resulting in an average of 1056 protein groups identified from single HeLa cells without MS1-level feature matching. This is 2.3 times more identifications than without FAIMS and a far greater level of proteome coverage for single mammalian cells than has been previously reported for a label-free study. Differential analysis of single microdissected motor neurons and interneurons from human spinal tissue indicated a similar level of proteome coverage, and the two subpopulations of cells were readily differentiated based on single-cell label-free quantification.

Journal ArticleDOI
TL;DR: The mutual interaction between RIC and HA in dark and redox-fluctuating environments provides a new pathway for fast turnover of recalcitrant OM in clay- and HA-rich ecosystems such as tropical forest soils and tidal marsh sediments.
Abstract: Hydroxyl radicals (·OH) exert a strong impact on the carbon cycle due to their nonselective and highly oxidizing nature. Reduced iron-containing clay minerals (RIC) are one of the major contributors to the formation of ·OH in dark environments, but their interactions with humic acids (HA) are poorly known. Here, we investigate the mutual interactions between RIC and HA under dark and oxygenated conditions. HA decreased the oxidation rate of structural Fe(II) in RIC but significantly promoted the ·OH yield. HA dissolved a fraction of Fe(II) from RIC to form an aqueous Fe(II)-HA complex. ·OH were generated through both heterogeneous (through oxidation of structural Fe(II)) and homogeneous pathways (through oxidation of aqueous Fe(II)-HA species). RIC-mediated ·OH production by providing H2O2 to react with Fe(II)-HA and electrons to regenerate Fe(II)-HA. This highly efficient homogeneous pathway was responsible for increased ·OH yield. Abundant ·OH significantly decreased the molecular size, bleached chromophores, and increased the oxygen-containing functional groups of HA. These molecular changes of HA resembled photochemical transformation of HA. The mutual interaction between RIC and HA in dark and redox-fluctuating environments provides a new pathway for fast turnover of recalcitrant organic matters in clay- and HA-rich ecosystems such as tropical forest soils and tidal marsh sediments.

Journal ArticleDOI
TL;DR: It is shown that the direct link between the two phases (and not merely being together) is required to selectively hydrogenate CO2 to methanol on catalysts containing Cu and ZrO2.
Abstract: Molecular interactions with both oxides and metals are essential for heterogenous catalysis, leading to remarkable synergistic impacts on activity and selectivity. Here, we show that the direct link between the two phases (and not merely being together) is required to selectively hydrogenate CO2 to methanol on catalysts containing Cu and ZrO2. Materials consisting of isolated Cu particles or atomically dispersed Cu–O–Zr sites only catalyze the reverse water-gas shift reaction. In contrast, a metal organic framework structure (UiO-66) with Cu nanoparticles occupying missing-linker defects maximizes the fraction of metallic Cu interfaced to ZrO2 nodes leading to a material with high adsorption capacity for CO2 and high activity and selectivity for low-temperature methanol synthesis. Molecular interactions with both oxides and metals are essential for heterogenous catalysis, leading to remarkable impacts on activity. Here the authors show that a direct link between Cu and ZrO2 in a metal organic framework is required to hydrogenate CO2 to methanol.


Journal ArticleDOI
TL;DR: In this article, a δ-Ni5Ga3/SiO2 catalyst was investigated to understand its surface dynamics during reaction conditions, which is highly active and stable for thermal CO2 hydrogenation to methanol.
Abstract: A δ-Ni5Ga3/SiO2 catalyst, which is highly active and stable for thermal CO2 hydrogenation to methanol, was investigated to understand its surface dynamics during reaction conditions. The catalyst was prepared, tested and characterized using a multitude of techniques, including ex-situ XRD (X-ray Diffraction), TEM (Transmission Electron Microscopy), H2-TPR (Temperature Programmed Reduction), CO chemisorption, along with in-situ ETEM (Environmental Transmission Electron Microscopy), APXPS (Ambient Pressure X-ray Photoelectron Spectroscopy) and HERFD-XAS (High Energy Resolution Fluorescence Detected X-Ray Absorption Spectroscopy). Upon air exposure Ga migrates from the subsurface region to the surface of the nanoparticles forming a Ga-oxide shell surrounding a metallic core. The oxide shell can be reduced completely only at high temperatures (above 600 °C); the temperature of the reducing activation treatment plays a crucial role on the catalytic activity. HERFD-XAS and APXPS measurements show that an amorphous Ga2O3 shell persists during catalysis after low temperature reductions, promoting methanol synthesis.

Journal ArticleDOI
TL;DR: Each diet had a positive effect on symptoms and inflammatory burden; the more exclusionary diets were associated with a better resolution of inflammation.
Abstract: Background: Crohn’s disease (CD) is a chronic inflammatory intestinal disorder associated with intestinal dysbiosis. Diet modulates the intestinal microbiome and therefore has a therapeutic potential. The aim of this study is to determine the potential efficacy of three versions of the specific carbohydrate diet (SCD) in active Crohn’s Disease. Methods: 18 patients with mild/moderate CD (PCDAI 15–45) aged 7 to 18 years were enrolled. Patients were randomized to either SCD, modified SCD(MSCD) or whole foods (WF) diet. Patients were evaluated at baseline, 2, 4, 8 and 12 weeks. PCDAI, inflammatory labs and multi-omics evaluations were assessed. Results: Mean age was 14.3 ± 2.9 years. At week 12, all participants (n = 10) who completed the study achieved clinical remission. The C-reactive protein decreased from 1.3 ± 0.7 at enrollment to 0.9 ± 0.5 at 12 weeks in the SCD group. In the MSCD group, the CRP decreased from 1.6 ± 1.1 at enrollment to 0.7 ± 0.1 at 12 weeks. In the WF group, the CRP decreased from 3.9 ± 4.3 at enrollment to 1.6 ± 1.3 at 12 weeks. In addition, the microbiome composition shifted in all patients across the study period. While the nature of the changes was largely patient specific, the predicted metabolic mode of the organisms increasing and decreasing in activity was consistent across patients. Conclusions: This study emphasizes the impact of diet in CD. Each diet had a positive effect on symptoms and inflammatory burden; the more exclusionary diets were associated with a better resolution of inflammation.

Journal ArticleDOI
13 Mar 2020
TL;DR: It is observed that the impact of surgery was much greater on fecal communities in comparison to mucosal ones and the spatial modifications in the microbiome after RYGB surgery corresponded to persistent changes in fecal fermentation and bile acid metabolism, both of which are associated with improved metabolic outcomes.
Abstract: Although the etiology of obesity is not well-understood, genetic, environmental, and microbiome elements are recognized as contributors to this rising pandemic. It is well documented that Roux-en-Y gastric bypass (RYGB) surgery drastically alters the fecal microbiome, but data are sparse on temporal and spatial microbiome and metabolome changes, especially in human populations. We characterized the structure and function (through metabolites) of the microbial communities in the gut lumen and structure of microbial communities on mucosal surfaces in nine morbidly obese individuals before, 6 months, and 12 months after RYGB surgery. Moreover, using a comprehensive multi-omic approach, we compared this longitudinal cohort to a previously studied cross-sectional cohort (n = 24). In addition to the expected weight reduction and improvement in obesity-related comorbidities after RYGB surgery, we observed that the impact of surgery was much greater on fecal communities in comparison to mucosal ones. The changes in the fecal microbiome were linked to increased concentrations of branched-chain fatty acids and an overall decrease in secondary bile acid concentrations. The microbiome and metabolome data sets for this longitudinal cohort strengthen our understanding of the persistent impact of RYGB on the gut microbiome and its metabolism. Our findings highlight the importance of changes in mucosal and fecal microbiomes after RYGB surgery. The spatial modifications in the microbiome after RYGB surgery corresponded to persistent changes in fecal fermentation and bile acid metabolism, both of which are associated with improved metabolic outcomes.