Federal University of São Carlos

About: Federal University of São Carlos is a education organization based out in São Carlos, Brazil. It is known for research contribution in the topics: Population & Microstructure. The organization has 16471 authors who have published 34057 publications receiving 456654 citations. The organization is also known as: UFSCar & Federal University of São Carlos.

Biosilicate® — A multipurpose, highly bioactive glass-ceramic. In vitro, in vivo and clinical trials

Abstract: In this review we critically analyze 28 theses and dissertations and over 30 scientific papers that tested Biosilicate®, a highly bioactive glass-ceramic, in a number of applications throughout the past 20 years. Biosilicate® presents a combination of positive features for bone tissue regeneration: it is highly bioactive, osteoconductive, osteoinductive, non-cytotoxic, non-genotoxic and has antibacterial properties. In addition, in the monolithic form, it is quite strong and tough. Its in vitro bioactivity is similar to that of the gold standard Bioglass 45S5. Biosilicate® has shown to be a very versatile, multipurpose biomaterial. It can be applied in powder, monolithic and 3D scaffold forms that could be easily machined during surgical procedures. This material has been successfully tested in a number of in vitro, in vivo and clinical studies, and several trials are ongoing. Biosilicate® is indeed a great option for a wide range of tissue engineering applications.

Application of functionalised carbon nanotubes immobilised into chitosan films in amperometric enzyme biosensors

Abstract: A new approach for building a bio-conductive interface for enzyme immobilisation is described. This strategy permits very simple preparation of the enzyme biosensor and also reveals direct electron transfer features. A graphite-epoxy resin composite (GrEC) electrode modified with functionalised multi-wall carbon nanotubes (MWCNTs) immobilised by 1-ethyl-3-(3-dimethylaminopropyl) carbodiimide together with N-hydroxysuccinimide (EDC–NHS) in a chitosan (Chit) matrix was prepared and characterised by cyclic voltammetry (CV) and electrochemical impedance spectroscopy (EIS) in the presence of hexaammineruthenium (III) chloride. It was then used as a base for glucose oxidase (GOx) immobilisation by the simple method of crosslinking with glutaraldehyde (GA) with bovine serum albumin (BSA) as carrier protein. The resulting mediator-free biosensor was applied to the determination of glucose in amperometric mode at different applied potentials and the mechanism of reaction was also investigated by cyclic voltammetry, with and without dissolved oxygen in solution. Analytical parameters, as well as reproducibility, repeatability and stability were determined. Interferences were assessed using different compounds usually present in natural samples, such as wines, juices or blood, in order to evaluate the selectivity of the developed biosensor. The novel combination of carbon nanotubes immobilised with chitosan crosslinked with EDC–NHS and glucose oxidase immobilised by crosslinking with glutaraldehyde offers an excellent, easy to make biosensor for glucose determination without interferences.

De Novo Assembly and Transcriptome Analysis of Contrasting Sugarcane Varieties

Abstract: Sugarcane is an important crop and a major source of sugar and alcohol. In this study, we performed de novo assembly and transcriptome annotation for six sugarcane genotypes involved in bi-parental crosses. The de novo assembly of the sugarcane transcriptome was performed using short reads generated using the Illumina RNA-Seq platform. We produced more than 400 million reads, which were assembled into 72,269 unigenes. Based on a similarity search, the unigenes showed significant similarity to more than 28,788 sorghum proteins, including a set of 5,272 unigenes that are not present in the public sugarcane EST databases; many of these unigenes are likely putative undescribed sugarcane genes. From this collection of unigenes, a large number of molecular markers were identified, including 5,106 simple sequence repeats (SSRs) and 708,125 single-nucleotide polymorphisms (SNPs). This new dataset will be a useful resource for future genetic and genomic studies in this species.

Epilithic diatoms as indicators of water quality in the Gravataí river, Rio Grande do Sul, Brazil

Abstract: The potential use of epilithic diatoms as indicators of organic pollution was evaluated in Gravatai River, RS, (latitude 29°45′–30°12′ S; longitude 50°27′–51°12′ W). The river suffers agricultural impacts in its upper course and urban and industrial organic pollution in its lower course. Epilithic diatoms were sampled eight times from September 2000 to August 2002, at six sites. Species were identified and densities and relative abundances of populations were determined. Simultaneously, physical, chemical and microbiological variables were measured (water temperature, conductivity, turbidity, pH, dissolved oxygen, biochemical oxygen demand (BOD5), chemical oxygen demand, ammonium, organic nitrogen, total nitrogen, ortho-phosphate, total phosphate, chloride and faecal coliforms). In order to interpret the environmental and biological variables, discriminant analysis and the TWINSPAN methods (Two-Way Indicator Species Analysis) were applied. The results indicated that the concentrations of ortho-phosphate, ammonium, total organic nitrogen, BOD5 and faecal coliforms characterized a pollution gradient along the river, where changes in the abundance or species composition were observed. Species were classified into three groups: Group A, including species more tolerant to heavy organic pollution and eutrophication, represented by Luticola goeppertiana, L. mutica, Eolimna subminuscula, Nitzschia palea and Sellaphora pupula; Group B, comprised of tolerant and widely distributed species such as Eunotia bilunaris, Frustulia crassinervia, F. saxonica, Navicula cryptocephala, N. cryptotenella, Nitzschia palea var. tenuirostris, Surirella angusta, Pinnularia microstauron and Ulnaria ulna and Group C, with less pollution tolerant species represented by Eunotia sp. and Gomphonema parvulum.