Mississippi State University

About: Mississippi State University is a education organization based out in Starkville, Mississippi, United States. It is known for research contribution in the topics: Population & Catfish. The organization has 14115 authors who have published 28594 publications receiving 700030 citations. The organization is also known as: The Mississippi State University of Agriculture and Applied Science & Mississippi State University of Agriculture and Applied Science.

Twinning-like lattice reorientation without a crystallographic twinning plane

Abstract: Twinning on the plane is a common mode of plastic deformation for hexagonal-close-packed metals. Here we report, by monitoring the deformation of submicron-sized single-crystal magnesium compressed normal to its prismatic plane with transmission electron microscopy, the reorientation of the parent lattice to a 'twin' lattice, producing an orientational relationship akin to that of the conventional twinning, but without a crystallographic mirror plane, and giving plastic strain that is not simple shear. Aberration-corrected transmission electron microscopy observations reveal that the boundary between the parent lattice and the 'twin' lattice is composed predominantly of semicoherent basal/prismatic interfaces instead of the twinning plane. The migration of this boundary is dominated by the movement of these interfaces undergoing basal/prismatic transformation via local rearrangements of atoms. This newly discovered deformation mode by boundary motion mimics conventional deformation twinning but is distinct from the latter and, as such, broadens the known mechanisms of plasticity.

High-resolution human genome structure by single-molecule analysis

Abstract: Variation in genome structure is an important source of human genetic polymorphism: It affects a large proportion of the genome and has a variety of phenotypic consequences relevant to health and disease. In spite of this, human genome structure variation is incompletely characterized due to a lack of approaches for discovering a broad range of structural variants in a global, comprehensive fashion. We addressed this gap with Optical Mapping, a high-throughput, high-resolution single-molecule system for studying genome structure. We used Optical Mapping to create genome-wide restriction maps of a complete hydatidiform mole and three lymphoblast-derived cell lines, and we validated the approach by demonstrating a strong concordance with existing methods. We also describe thousands of new variants with sizes ranging from kb to Mb.

Predictable convergence in hemoglobin function has unpredictable molecular underpinnings

Abstract: To investigate the predictability of genetic adaptation, we examined the molecular basis of convergence in hemoglobin function in comparisons involving 56 avian taxa that have contrasting altitudinal range limits. Convergent increases in hemoglobin-oxygen affinity were pervasive among high-altitude taxa, but few such changes were attributable to parallel amino acid substitutions at key residues. Thus, predictable changes in biochemical phenotype do not have a predictable molecular basis. Experiments involving resurrected ancestral proteins revealed that historical substitutions have context-dependent effects, indicating that possible adaptive solutions are contingent on prior history. Mutations that produce an adaptive change in one species may represent precluded possibilities in other species because of differences in genetic background.

DC insulator dielectrophoretic applications in microdevice technology: a review

Abstract: Dielectrophoresis is a noninvasive, nondestructive, inexpensive, and fast technique for the manipulation of bioparticles. Recent advances in the field of dielectrophoresis (DEP) have resulted in new approaches for characterizing the behavior of particles and cells using direct current (DC) electric fields. In such approaches, spatial nonuniformities are created in the channel by embedding insulating obstacles in the channel or flow field in order to perform separation or trapping. This emerging field of dielectrophoresis is commonly termed DC insulator dielectrophoresis (DC-iDEP), insulator-based dielectrophoresis (iDEP), or electrodeless dielectrophoresis (eDEP). In many microdevices, this form of dielectrophoresis has advantages over traditional AC-DEP, including single material microfabrication, remotely positioned electrodes, and reduced fouling of the test region. DC-iDEP applications have included disease detection, separation of cancerous cells from normal cells, and separation of live from dead bacteria. However, there is a need for a critical report to integrate these important research findings. The aim of this review is to provide an overview of the current state-of-art technology in the field of DC-iDEP for the separation and trapping of inert particles and cells. In this article, a review of the concepts and theory leading to the manipulation of particles via DC-iDEP is given, and insulating obstacle geometry designs and the characterization of device performance are discussed. This review compiles and compares the significant findings obtained by researchers in handling and manipulating particles.

A comparison of distance-based and classification-based analyses of habitat use

Abstract: Quantifying habitat use is vital to understanding animal ecology. Herein, we contrast classification-based (i.e., animal locations are placed into habitat categories for subsequent analyses) and distance-based (i.e., distance between animal locations and habitat features are used in subsequent analyses) approaches for analyzing habitat use data. Compositional analysis (CA) and a distance-based analysis (DA) were used to quantify habitat selection of Northern Bobwhite (Colinus virginianus). We qualitatively compared the outcome of these different procedures to illustrate advantages of the DA approach. The DA approach identified edges as an important habitat feature, and location error did not alter conclusions from DA. In contrast, CA did not detect the importance of edge, and presence of location errors altered conclusions. Moreover, modeling the distribution of location error did not effectively reduce sensitivity to error within CA. Distance-based approaches to habitat analyses are not restricted to lin...