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Institution

Moscow Institute of Physics and Technology

EducationDolgoprudnyy, Russia
About: Moscow Institute of Physics and Technology is a education organization based out in Dolgoprudnyy, Russia. It is known for research contribution in the topics: Laser & Large Hadron Collider. The organization has 8594 authors who have published 16968 publications receiving 246551 citations. The organization is also known as: MIPT & Moscow Institute of Physics and Technology (State University).


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Journal ArticleDOI
Albert M. Sirunyan, Armen Tumasyan, Wolfgang Adam1, Federico Ambrogi1  +2358 moreInstitutions (204)
TL;DR: In this article, the authors proposed an approach for the evaluation of the EOS-EOS 2020 grant in the context of research at the National Science Center in Warsaw, Poland.
Abstract: Marie-Curie program and the European Research Council and Horizon 2020 Grant, contract No. 675440 (EuropeanUnion);theLeventisFoundation;theA.P.Sloan Foundation; the Alexander von Humboldt Foundation; the Belgian Federal Science Policy Office; the Fonds pour la Formation `a la Recherche dans l’Industrie et dans l’Agriculture (FRIA-Belgium); the Agentschap voor Innovatie door Wetenschap en Technologie (IWTBelgium); the F.R.S.-FNRS and FWO (Belgium) under the “Excellence of Science—EOS”—be.h Project No.30820817;theMinistryofEducation,YouthandSports (MEYS) of the Czech Republic; the Lendulet (“Momentum”) Program and the Janos Bolyai Research Scholarship of the Hungarian Academy of Sciences, the New National Excellence Program UNKP, the NKFIA research Grants Nos. 123842, 123959, 124845, 124850 and 125105 (Hungary); the Council of Science and Industrial Research, India; the HOMING PLUS program of the Foundation for Polish Science, cofinanced from European Union, Regional Development Fund, the Mobility Plus program of the Ministry of Science and Higher Education, the National Science Center (Poland), contractsHarmonia2014/14/M/ST2/00428,Opus2014/13/ B/ST2/02543, 2014/15/B/ST2/03998, and 2015/19/B/ST2/ 02861, Sonata-bis 2012/07/E/ST2/01406; the National Priorities Research Program by Qatar National Research Fund; the Programa Estatal de Fomento de la Investigacion Cientifica y T´ecnicade Excelencia Maria de Maeztu,Grant No. MDM-2015-0509 and the Programa Severo Ochoa del Principado de Asturias; the Thalis and Aristeia programs cofinanced by EU-ESF and the Greek NSRF; the Rachadapisek Sompot Fund for Postdoctoral Fellowship, Chulalongkorn University and the Chulalongkorn Academic into Its 2nd Century Project Advancement Project (Thailand); the Welch Foundation, Contract No. C-1845; and the Weston Havens Foundation (USA).

89 citations

Journal ArticleDOI
Marc F. Lensink1, Guillaume Brysbaert1, Nurul Nadzirin2, Sameer Velankar2, Raphael A. G. Chaleil3, Tereza Gerguri3, Paul A. Bates3, Elodie Laine4, Alessandra Carbone4, Alessandra Carbone5, Sergei Grudinin6, Ren Kong7, Ranran Liu7, Xu Ximing7, Hang Shi7, Shan Chang7, Miriam Eisenstein8, Agnieszka S. Karczyńska9, Cezary Czaplewski9, Emilia A. Lubecka9, Agnieszka G. Lipska9, Paweł Krupa10, Magdalena A. Mozolewska10, Łukasz Golon9, Sergey A. Samsonov9, Adam Liwo9, Adam Liwo11, Silvia Crivelli12, Guillaume Pagès6, Mikhail Karasikov13, Maria Kadukova14, Maria Kadukova6, Yumeng Yan15, Sheng-You Huang15, Mireia Rosell16, Mireia Rosell17, Luis A. Rodríguez-Lumbreras16, Luis A. Rodríguez-Lumbreras17, Miguel Romero-Durana17, Lucía Díaz-Bueno17, Juan Fernández-Recio17, Juan Fernández-Recio16, Charles Christoffer18, Genki Terashi18, Woong-Hee Shin18, Tunde Aderinwale18, Sai Raghavendra Maddhuri Venkata Subraman18, Daisuke Kihara18, Dima Kozakov19, Sandor Vajda20, Kathyn Porter20, Dzmitry Padhorny19, Israel Desta20, Dmitri Beglov20, Mikhail Ignatov19, Sergey Kotelnikov14, Sergey Kotelnikov19, Iain H. Moal2, David W. Ritchie21, Isaure Chauvot de Beauchêne21, Bernard Maigret21, Marie-Dominique Devignes21, Maria Elisa Ruiz Echartea21, Didier Barradas-Bautista22, Zhen Cao22, Luigi Cavallo22, Romina Oliva23, Yue Cao24, Yang Shen24, Minkyung Baek25, Taeyong Park25, Hyeonuk Woo25, Chaok Seok25, M. Braitbard26, Lirane Bitton26, Dina Scheidman-Duhovny26, Justas Dapkūnas27, Kliment Olechnovič27, Česlovas Venclovas27, Petras J. Kundrotas28, Saveliy Belkin28, Devlina Chakravarty28, Varsha D. Badal28, Ilya A. Vakser28, Thom Vreven29, Sweta Vangaveti29, Tyler M. Borrman29, Zhiping Weng29, Johnathan D. Guest30, Ragul Gowthaman30, Brian G. Pierce30, Xianjin Xu31, Rui Duan31, Liming Qiu31, Jie Hou31, Benjamin Ryan Merideth31, Zhiwei Ma31, Jianlin Cheng31, Xiaoqin Zou, Panos Koukos32, Jorge Roel-Touris32, Francesco Ambrosetti32, Cunliang Geng32, Jörg Schaarschmidt32, Mikael Trellet32, Adrien S. J. Melquiond32, Li C. Xue32, Brian Jiménez-García32, Charlotte W. van Noort32, Rodrigo V. Honorato32, Alexandre M. J. J. Bonvin32, Shoshana J. Wodak 
14 Oct 2019-Proteins
TL;DR: CAPRI Round 46 indicates that residues in binding interfaces were less well predicted in this set of targets than in previous Rounds, providing useful insights for directions of future improvements.
Abstract: We present the results for CAPRI Round 46, the third joint CASP‐CAPRI protein assembly prediction challenge. The Round comprised a total of 20 targets including 14 homo‐oligomers and 6 heterocomplexes. Eight of the homo‐oligomer targets and one heterodimer comprised proteins that could be readily modeled using templates from the Protein Data Bank, often available for the full assembly. The remaining 11 targets comprised 5 homodimers, 3 heterodimers, and two higher‐order assemblies. These were more difficult to model, as their prediction mainly involved “ab‐initio” docking of subunit models derived from distantly related templates. A total of ~30 CAPRI groups, including 9 automatic servers, submitted on average ~2000 models per target. About 17 groups participated in the CAPRI scoring rounds, offered for most targets, submitting ~170 models per target. The prediction performance, measured by the fraction of models of acceptable quality or higher submitted across all predictors groups, was very good to excellent for the nine easy targets. Poorer performance was achieved by predictors for the 11 difficult targets, with medium and high quality models submitted for only 3 of these targets. A similar performance “gap” was displayed by scorer groups, highlighting yet again the unmet challenge of modeling the conformational changes of the protein components that occur upon binding or that must be accounted for in template‐based modeling. Our analysis also indicates that residues in binding interfaces were less well predicted in this set of targets than in previous Rounds, providing useful insights for directions of future improvements.

89 citations

Journal ArticleDOI
TL;DR: This work reveals key interactions that are often omitted from structure-based descriptions, including hydrophobic interactions, nonclassical hydrogen bonds, and the involvement of backbone atoms, in receptor-ligand interactions.
Abstract: Our interpretation of ligand–protein interactions is often informed by high-resolution structures, which represent the cornerstone of structure-based drug design. However, visual inspection and molecular mechanics approaches cannot explain the full complexity of molecular interactions. Quantum Mechanics approaches are often too computationally expensive, but one method, Fragment Molecular Orbital (FMO), offers an excellent compromise and has the potential to reveal key interactions that would otherwise be hard to detect. To illustrate this, we have applied the FMO method to 18 Class A GPCR–ligand crystal structures, representing different branches of the GPCR genome. Our work reveals key interactions that are often omitted from structure-based descriptions, including hydrophobic interactions, nonclassical hydrogen bonds, and the involvement of backbone atoms. This approach provides a more comprehensive picture of receptor–ligand interactions than is currently used and should prove useful for evaluation of...

89 citations

Journal ArticleDOI
Georges Aad1, Alexander Kupco2, Peter Davison3, Samuel Webb4  +2915 moreInstitutions (220)
TL;DR: In this article, a measurement of the double-differential cross section for the Drell-Yan Z/γ∗ → l+l− and photon-induced γγ → l + l− processes where l is an electron or muon was performed for invariant masses of the lepton pairs, mll, between 116 GeV and 1500 GeV.
Abstract: This paper presents a measurement of the double-differential cross section for the Drell-Yan Z/γ∗ → l+l− and photon-induced γγ → l+l− processes where l is an electron or muon. The measurement is performed for invariant masses of the lepton pairs, mll, between 116 GeV and 1500 GeV using a sample of 20.3 fb−1 of pp collisions data at centre-of-mass energy of s=8 TeV collected by the ATLAS detector at the LHC in 2012. The data are presented double differentially in invariant mass and absolute dilepton rapidity as well as in invariant mass and absolute pseudorapidity separation of the lepton pair. The single-differential cross section as a function of mll is also reported. The electron and muon channel measurements are combined and a total experimental precision of better than 1% is achieved at low mll. A comparison to next-to-next-to-leading order perturbative QCD predictions using several recent parton distribution functions and including next-to-leading order electroweak effects indicates the potential of the data to constrain parton distribution functions. In particular, a large impact of the data on the photon PDF is demonstrated.[Figure not available: see fulltext.]

88 citations

Proceedings ArticleDOI
15 Jun 1998
TL;DR: In this article, the authors used the limit process expansions relevant to unsteady viscous interactions as a prelude to the analysis of hypersonic flow stability and transition, and showed that the specific heat ratio plays a major role in the stability of flow since it controls the reflection of waves from the shock and the radiation of energy in the shock layer whose thickness scales with 7 -1.
Abstract: Three flow problems are discussed whose solutions suggest flow control schemes. These are 1) unsteady hypersonic flow over bodies in the Newtonian approximation, 2) a mechanism of hypersonic flow stabilization over acoustically semi-transparent walls and 3) store separation from cavities. Simplified systematic approximations based on asymptotic frameworks lead to compact computational models that elucidate the flow structure and opportunities for control. Besides generalizing the steady model of Cole, the Newtonian approximation in the unsteady context shows that unsteady body perturbations can lead to inflectional velocity profiles that can produce instabilities and boundary layer transition to enhance mixing in combustors and inlets. The absorbing wall illustrates a mechanism that can be exploited to damp 2 mode hypersonic instabilities. Simplified flow modeling based on systematic asymptotics for store separation from cavities shows the influence of the cavity shear layer on apparent mass effects that are important to damping in pitch and clearance from the parent body. Comparisons with free drop experiments are used for initial validations of the analytical models. * Senior Scientist, Fellow, AIAA f Principal Researcher, Member, AIAA * Margaret Damn Distinguished Professor, Mathematical Sciences, Fellow, AIAA § Professor ** Professor, Associate Fellow Copyright© 1998, American Institute of Aeronautics and Astronautics, Inc. 1. Unsteady Newtonian thin shock layers and hypersonic flow stability 1.11ntroduction Although the stability of high speed flows has received much attention in the recent literature, major complicating aspects have not been treated in a unified way. These features include the combined effects of the finite shock displacement on the boundary layer, the nonparallelism of the flow and the vorticity introduced by the shock curvature. The relevant structure of the shock and boundary layers has been treated in [1][9]. In [6] and [7], the aforementioned stability issues were discussed within the Hypersonic Small Disturbance approximation for the inviscid deck strongly interacting with the hypersonic boundary layer. Equations of motion for the mean and fluctuating small amplitude flows were analyzed. Because of nonparallelism in this framework, the spatial part of the waves cannot be treated by the usual Fourier decomposition and an initial value rather than eigenproblem for spatial stability is obtained. The initial value problem leads to partial rather than ordinary differential equations that require a numerical marching method for their solution. Results indicate that the specific heat ratio 7 plays a major role in the stability of flow since it controls the reflection of waves from the shock and the radiation of energy in the shock layer whose thickness scales with 7 -1. Early experiments such as those described in [2] showed that for a practically interesting class of flows, the shock layer becomes very thin compared to the boundary layer near the nose of hypersonic flat plates. This feature and the desire to further understand the shock and boundary layer structure encourage the use of the Newtonian approximation 7 —> 1. The connection with flow stability motivates the study of this approximation in an unsteady context. In this chapter, limit process expansions will be discussed relevant to unsteady viscous interactions as a prelude to the analysis of hypersonic stability and transition. The application of these limits is an unsteady extension of the steady state analysis of [3]. Although the focus here is the treatment of viscous interaction, boundary layer stability, receptivity and transition, the results derived are useful in inviscid hypersonic unsteady aerodynamic methodology and load prediction as well. 1.2 Analysis Figure 1 schematically indicates strong interaction flow near the leading edge of a hypersonic body. The viscous boundary layer which is usually thin, occupies an appreciable fraction of the distance between the shock and body that will be considered without undue loss of generality a flat plate in what follows. Accordingly F(x,f} = Q, in the notation of Fig. 1. The results in this chapter will be expressed in terms of the boundary layer thickness function A(3c,r) = 0, which in the interpretation mentioned in the Introduction could be the body shape in an inviscid context. Copyright© 1998, American Institute of Aeronautics and Astronautics, Inc. The unsteady form of the Hypersonic Small Disturbance Theory (HSDT) equations [9] are applicable and are obtained as in [7] from limit process expansions of hatted variables defined as quantities normalized by their freestream counterparts, with p,T,u,v,fJL the density, temperature, horizontal, vertical components of the velocity vector, and viscosity respectively. If the freestream density, pressure and velocity are denoted as U,p^ and p^ respectively, then a pressure coefficient used in these expansions is defined as p = (P-PJ/P-U. Fig. 1 Schematic of hypersonic strong interaction flow. With these definitions and the coordinate system in Fig. 1 as well the normalization of the Cartesian dimensional coordinates x and y to the unit reference length L and the reference time scale L/U for the time t, unbarred dimensionless normalized counterparts of these independent variables are defined. If M^ and R^ are respectively the freestream Mach and Reynolds numbers, and 5 is a characteristic flow deflection angle, then the expansions are p=a(x,y,t;H,y)+--(1.1) T=T+— p = 8p+M = l+v =• §v+• • (1.2) (1.3) (1.4) (1.5) (1.6) where y = y/(L8}. These expansions are valid in the HSDT limit x, y, t, H = M o are fixed as 8 — > 0 ,

88 citations


Authors

Showing all 8797 results

NameH-indexPapersCitations
Dominique Pallin132113188668
Vladimir N. Uversky13195975342
Lee Sawyer130134088419
Dmitry Novikov12734883093
Simon Lin12675469084
Zeno Dixon Greenwood126100277347
Christian Ohm12687369771
Alexey Myagkov10958645630
Stanislav Babak10730866226
Alexander Zaitsev10345348690
Vladimir Popov102103050257
Alexander Vinogradov9641040879
Gueorgui Chelkov9332141816
Igor Pshenichnov8336222699
Vladimir Popov8337026390
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Performance
Metrics
No. of papers from the Institution in previous years
YearPapers
202368
2022238
20211,774
20202,246
20192,112
20181,902