Showing papers by "National Autonomous University of Mexico published in 1998"

Accretion and the Evolution of T Tauri Disks

Abstract: Using results and calibrations from a previous paper (Gullbring et al. 1997), we estimate disk accretion rates for pre-main-sequence stars in the Taurus and Chamaeleon I molecular cloud complexes. The median accretion rate for T Tauri stars of age ~1 Myr is ~10-8 M☉ yr-1; the intrinsic scatter at a given age may be as large as 1 order of magnitude. There is a clear decline of mass accretion rates with increasing age t among T Tauri stars. Representing this decline as tη, we estimate 1.5 η 2.8; the large uncertainty is due to the wide range of accretion rates at a given age, the limited age range of the sample, and errors in estimating stellar ages and accretion luminosities. Adopting values of η near the low end of this range, which are more likely given probable errors and the neglect of birthline age corrections, masses accreted during the T Tauri phase are roughly consistent with disk masses estimated from millimeter-wave dust emission. Similarity solutions for evolving, expanding disks are used to investigate observational constraints on disk properties employing a minimum of parameters. For an assumed power-law form of the disk viscosity with radius ν Rγ, η 1.5 corresponds to γ 1. The limit γ ~ 1 corresponds to a roughly constant α in the Shakura-Sunyaev (1973) viscosity parameterization; using current observed disk sizes, we estimate α ~ 10-2 (on scales ~10-100 AU). Much of the observed variation in mass accretion rates can be accounted for by varying initial disk masses between 0.01 and 0.2 M☉, but this result may be strongly affected by the presence of binary companion stars. These results emphasize the need for older samples of stars for studying disk evolution.

Quantum geometry and black hole entropy

Abstract: A ``black hole sector'' of nonperturbative canonical quantum gravity is introduced. The quantum black hole degrees of freedom are shown to be described by a Chern-Simons field theory on the horizon. It is shown that the entropy of a large nonrotating black hole is proportional to its horizon area. The constant of proportionality depends upon the Immirzi parameter, which fixes the spectrum of the area operator in loop quantum gravity; an appropriate choice of this parameter gives the Bekenstein-Hawking formula $S\phantom{\rule{0ex}{0ex}}=\phantom{\rule{0ex}{0ex}}A/4{\ensuremath{\ell}}_{P}^{2}$. With the same choice of the Immirzi parameter, this result also holds for black holes carrying electric or dilatonic charge, which are not necessarily near extremal.

Old Stellar Populations. VI. Absorption-Line Spectra of Galaxy Nuclei and Globular Clusters

Abstract: We present absorption-line strengths on the Lick/IDS line-strength system of 381 galaxies and 38 globular clusters in the 4000-6400 A region. All galaxies were observed at Lick Observatory between 1972 and 1984 with the Cassegrain Image Dissector Scanner spectrograph, which makes this study one of the largest homogeneous collections of galaxy spectral line data to date. We also present a catalog of nuclear velocity dispersions used to correct the absorption-line strengths onto the stellar Lick/IDS system. Extensive discussion of both random and systematic errors of the Lick/IDS system is provided. Indices are seen to fall into three families: α-element-like indices (including CN, Mg, Na D, and TiO2) that correlate positively with velocity dispersion; Fe-like indices (including Ca, the G band, TiO1, and all Fe indices) that correlate only weakly with velocity dispersion and the α indices; and Hβ that anticorrelates with both velocity dispersion and the α indices. C24668 seems to be intermediate between the α and Fe groups. These groupings probably represent different element abundance families with different nucleosynthesis histories.

Accretion Disks around Young Objects. I. The Detailed Vertical Structure

Abstract: We discuss the properties of an accretion disk around a star with parameters typical of classical T Tauri stars (CTTSs) and with the average accretion rate for these disks The disk is assumed steady and geometrically thin The turbulent viscosity coefficient is expressed using the α prescription, and the main heating mechanisms considered are viscous dissipation and irradiation by the central star The energy is transported by radiation, turbulent conduction, and convection We find that irradiation from the central star is the main heating agent of the disk, except in the innermost regions, R 5 AU) becomes less dense, optically thin, and almost vertically isothermal, with a temperature distribution T ∝ R-1/2 The decrease in surface density at the outer disk decreases the disk mass by a factor of 4 with respect to a purely viscous case In addition, irradiation tends to make the outer disk regions stable against gravitational instabilities

Plant cell wall proteins

Abstract: ▪ Abstract The nature of cell wall proteins is as varied as the many functions of plant cell walls. With the exception of glycine-rich proteins, all are glycosylated and contain hydroxyproline (Hyp). Again excepting glycine-rich proteins, they also contain highly repetitive sequences that can be shared between them. The majority of cell wall proteins are cross-linked into the wall and probably have structural functions, although they may also participate in morphogenesis. On the other hand, arabinogalactan proteins are readily soluble and possibly play a major role in cell-cell interactions during development. The interactions of these proteins between themselves and with other wall components is still unknown, as is how wall components are assembled. The possible functions of cell wall proteins are suggested based on repetitive sequence, localization in the plant body, and the general morphogenetic pattern in plants.

From specific gene regulation to genomic networks: a global analysis of transcriptional regulation in Escherichia coli

Abstract: Summary Because a large number of molecular mechanisms involved in gene regulation have been described during the last decades, it is now becoming possible to address questions about the global structure of gene regulatory networks, at least in the case of some of the best-characterized organisms.This paper presents a global characterization of the transcriptional regulation in Escherichia coli on the basis of the current data. The connectivity of the corresponding network was evaluated by analyzing the distribution of the number of genes regulated by a given regulatory protein, and the distribution of the number of regulatory genes regulating a given regulated gene. The mean connectivity found (between 2 and 3) shows a rather loosely interconnected structure. Special emphasis is given to circular sequences of interactions (‘‘circuits’’) because of their critical dynamical properties. Only one-element circuits were found, in which negative autoregulation is the dominant architecture. These global properties are discussed in light of several pertinent theoretical approaches, as well as in terms of physiological and evolutionary considerations. BioEssays 20:433‐440, 1998. r 1998 John Wiley & Sons, Inc.

Somatosensory discrimination based on cortical microstimulation

Abstract: The sensation of flutter is produced when mechanical vibrations in the range of 5-50Hz are applied to the skin. A flutter stimulus activates neurons in the primary somatosensory cortex (S1) that somatotopically map to the site of stimulation. A subset of these neurons-those with quickly adapting properties, associated with Meissner's corpuscles-are strongly entrained by periodic flutter vibrations, firing with a probability that oscillates at the input frequency. Hence, quickly adapting neurons provide a dynamic representation of such flutter stimuli. However, are these neurons directly involved in the perception of flutter? Here we investigate this in monkeys trained to discriminate the difference in frequency between two flutter stimuli delivered sequentially on the fingertips. Microelectrodes were inserted into area 3b of S1 and the second stimulus was substituted with a train of injected current pulses. Animals reliably indicated whether the frequency of the second (electrical) signal was higher or lower than that of the first (mechanical) signal, even though both frequencies changed from trial to trial. Almost identical results were obtained with periodic and aperiodic stimuli of equal average frequencies. Thus, the quickly adapting neurons in area 3b activate the circuit leading to the perception of flutter. Furthermore, as far as can be psychophysically quantified during discrimination, the neural code underlying the sensation of flutter can be finely manipulated, to the extent that the behavioural responses produced by natural and artificial stimuli are indistinguishable.

Characterization of cry Genes in a Mexican Bacillus thuringiensis Strain Collection

Abstract: Mexico is located in a transition zone between the Nearctic and Neotropical biogeographical regions and contains a rich and unique biodiversity. A total of 496 Bacillus thuringiensis strains were isolated from 503 soil samples collected from the five macroregions of the country. The characterization of the strain collection provided useful information on the ecological patterns of distribution of B. thuringiensis and opportunities for the selection of strains to develop novel bioinsecticidal products. The analysis of the strains was based on multiplex PCR with novel general and specific primers that could detect the cry1, cry3, cry5, cry7, cry8, cry9, cry11, cry12, cry13, cry14, cry21, and cyt genes. The proteins belonging to the Cry1 and Cry9 groups are toxic for lepidopteran insects. The Cry3, Cry7, and Cry8 proteins are active against coleopteran insects. The Cry5, Cry12, Cry13, and Cry14 proteins are nematocidal. The Cry11, Cry21, and Cyt proteins are toxic for dipteran insects. Six pairs of general primers are used in this method. Strains for which unique PCR product profiles were obtained with the general primers were further characterized by additional PCRs with specific primers. Strains containing cry1 genes were the most abundant in our collection (49.5%). Thirty-three different cry1-type profiles were identified. B. thuringiensis strains harboring cry3 genes represented 21.5% of the strains, and 7.9% of the strains contained cry11 and cyt genes. cry7, cry8, and cry9 genes were found in 0.6, 2.4, and 2.6% of the strains, respectively. No strains carrying cry5, cry12, cry13, cry14, or cry21 genes were found. Finally, 14% of the strains did not give any PCR product and did not react with any polyclonal antisera. Our results indicate the presence of strains that may harbor potentially novel Cry proteins as well as strains with combinations of less frequently observed cry genes.

Density probability distribution in one-dimensional polytropic gas dynamics

Abstract: We discuss the generation and statistics of the density fluctuations in highly compressible polytropic turbulence, based on a simple model and one-dimensional numerical simulations. Observing that density structures tend to form in a hierarchical manner, we assume that density fluctuations follow a random multiplicative process. When the polytropic exponent $\ensuremath{\gamma}$ is equal to unity, the local Mach number is independent of the density, and our assumption leads us to expect that the probability density function (PDF) of the density field is a log-normal. This isothermal case is found to be special, with a dispersion ${\ensuremath{\sigma}}_{s}^{2}$ scaling as the square turbulent Mach number ${M}^{2},$ where $s\ensuremath{\equiv}\mathrm{ln}\ensuremath{\rho}$ and $\ensuremath{\rho}$ is the fluid density. Density fluctuations are stronger than expected on the sole basis of shock jumps. Extrapolating the model to the case $\ensuremath{\gamma}\ensuremath{ e}1,$ we find that as the Mach number becomes large, the density PDF is expected to asymptotically approach a power-law regime at high densities when $\ensuremath{\gamma}l1,$ and at low densities when $\ensuremath{\gamma}g1.$ This effect can be traced back to the fact that the pressure term in the momentum equation varies exponentially with $s,$ thus opposing the growth of fluctuations on one side of the PDF, while being negligible on the other side. This also causes the dispersion ${\ensuremath{\sigma}}_{s}^{2}$ to grow more slowly than ${M}^{2}$ when $\ensuremath{\gamma}\ensuremath{ e}1.$ In view of these results, we suggest that Burgers flow is a singular case not approached by the high-$\stackrel{\ifmmode \tilde{}\else \~{}\fi{}}{M}$ limit, with a PDF that develops power laws on both sides.

Lowest Energy Structures of Gold Nanoclusters

Abstract: The lowest energy structures of ${\mathrm{Au}}_{n}$ ( $n\phantom{\rule{0ex}{0ex}}=\phantom{\rule{0ex}{0ex}}38,55,75$) nanoclusters are obtained by unconstrained dynamical and genetic-symbiotic optimization methods, using a Gupta $n$-body potential. A set of amorphous structures, nearly degenerate in energy, are found as the most stable configurations. Some crystalline or quasicrystalline isomers are also minima of the cluster potential energy surface with similar energy. First principles calculations using density functional theory confirm these results and give different electronic properties for the ordered and disordered gold cluster isomers.

Alveolar epithelial cell death adjacent to underlying myofibroblasts in advanced fibrotic human lung

Abstract: Earlier work from this laboratory showed that abnormal fibroblast phenotypes isolated from fibrotic human lung produce factor(s) capable of inducing apoptosis and necrosis of alveolar epithelial ce...

Cysticercosis and epilepsy: a critical review.

Abstract: Neurocysticercosis (NC) remains a major public health problem in developing and some developed countries. Currently, the best procedures for diagnosing NC are neuroimaging studies. Immunoserologic assays, such as enzyme-linked immunoelectrotransfer blot assay (EITB) or enzyme-linked immunosorbent assay (ELISA), detect antibodies against Taenia solium, or cysticercus. Consequently, they are useful in identifying a population at risk of contact with the parasite but do not necessarily indicate a systemic active infection. Most seropositive individuals are asymptomatic. No data from prospective studies concern the proportion of these individuals that will develop seizures or other neurologic symptoms. There is a discrepancy between the results of serologic assays and neuroimaging studies: >50% of those individuals with NC diagnosed by computed tomography (CT) scan test EITB negative. Pathophysiologic classification of NC into active, transitional, and inactive forms permits a good correlation between clinical manifestations and neuroimaging procedures and facilitates medical and surgical management and research. The most frequent clinical manifestations of NC are seizures. We assume that NC is the main cause of symptomatic epilepsy in developing countries; however, no case-control or cohort studies demonstrate this association. Most patients with NC with seizures have a good prognosis; nevertheless, further studies analyzing factors related to recurrence of seizures and possibilities of discontinuation of antiepileptic medications (AEDs) are needed. Regarding treatment of NC with antihelminthic drugs, no controlled clinical trials exist that establish specific indications, definitive doses, and duration of treatment. The most effective approach to taeniasis/cysticercosis infection is prevention. This should be a primary public health focus for developing countries. We critically review the available information regarding the epidemiology and diagnosis of human cysticercosis, the physiopathology and imaging correlation of the parasite in the central nervous system (CNS) of the host, the relation between seizures or epilepsy and NC, and the issues surrounding the treatment and prognosis of NC, including the use of antihelminthic therapy.

The effects of seed size, cotyledon reserves, and herbivory on seedling survival and growth in Quercus rugosa and Q. laurina (Fagaceae).

Abstract: In a greenhouse experiment, seedling survival of two oak species (Quercus rugosa and Q. laurina) was greatly affected by the excision of cotyledons 1 mo after germination, with a greater impact on Q. laurina. The effect of seed size was also significant for both species, with a positive correlation between seed mass and survival and growth. The effect of cotyledon excision on seedling growth persisted throughout the first growing season in Q. rugosa and was not analyzed for Q. laurina due to the low number of seedlings that survived cotyledon excision. Seed size significantly affected seedling height, diameter, leaf area, and biomass at 6 mo. Seed size and cotyledon retention affected the ability of Q. rugosa to recover from herbivory, as both factors had a significant effect on relative growth rates after aerial biomass removal. The results show that seedlings originating from large seeds can better endure loss of cotyledons and aerial biomass and thus are better equipped to confront stress early in their lives.

Differences in Perception of Everyday Odors: a Japanese-German Cross-cultural Study

Abstract: There is a growing appreciation that experience with odors may strongly influence their perception. To further investigate this, the responses of 40 Japanese and 44 age-matched German women to everyday odorants were compared. Subjects were presented with 18 stimuli in squeeze bottles and asked to rate them according to intensity, familiarity, pleasantness and edibility, to describe associations elicited by them and, if possible, to name them. One-third of the odorants were presumed to be familiar to the Japanese only, one-third to the Germans and one-third to both populations. Significant differences were found between the two populations on all measures. Better performance by the Japanese in providing appropriate descriptors for 'Japanese' odorants and by the Germans for 'European' odorants supported the pre-selection of stimuli as culture-typical. Particularly clear differences between the two populations were found in pleasantness ratings. In general, a positive relationship was found between pleasantness and judgement of stimuli as edible, suggesting that culture-specific experiences-particularly of foods-may significantly influence odor perception. Somewhat unexpectedly, significant differences were also found between the two populations in intensity ratings for some odorants. These differences did not seem simply to be artefacts of the test situation and raise the possibility that experience may even influence such basic aspects of odor perception as stimulus intensity.

Chemical composition of the Orion nebula derived from echelle spectrophotometry

Abstract: We present echelle spectroscopy in the 3500- to 7060-?… range for two positions of the Orion nebula. The data were obtained using the 2.1-m telescope at Observatorio Astron??mico Nacional in San Pedro M??rtir, Baja California. We have measured the intensities of about 220 emission lines, in particular 81 permitted lines of C+, N+, N++, O0, O+, Ne0, Si+, Si++ and S+, some of them produced by recombination only and others mainly by fluorescence. We have determined electron temperatures, electron densities and ionic abundances using different continuum and line intensity ratios. We derived the He, C and O abundances from recombination lines and find that the C/H and O/H values are very similar to those derived from B stars of the Orion association, and that these nebular values are independent of the temperature structure. We have also derived abundances from collisionally excited lines. These abundances depend on the temperature structure; accurate t2 values have been derived comparing the O II recombination lines with the [O III] collisionally excited lines. The gaseous abundances of Mg, Si and Fe show significant depletions, implying that a substantial fraction of these atoms is tied up in dust grains. The derived depletions are similar to those found in warm clouds of the Galactic disc, but are not as large as those found in cold clouds. A comparison of the solar and Orion chemical abundances is made.

Fast deconvolution of multichannel systems using regularization

Abstract: A very fast deconvolution method, which is based on the fast Fourier transform (FFT), can be used to control the outputs from a multichannel plant comprising any number of control sources and error sensors. The result is a matrix of causal finite impulse response filters whose performance is optimized at a large number of discrete frequencies. The paper is particularly aimed at multichannel sound reproduction and more specifically reproducing the sound field from a set of loudspeakers.

Microquasars in our Galaxy

Abstract: Microquasars are stellar-mass black holes in our Galaxy that mimic, on a smaller scale, many of the phenomena seen in quasars. Their discovery opens the way for a new understanding of the connection between the accretion of matter onto black holes and the origin of the relativistic jets observed in remote quasars.

Pet, an Autotransporter Enterotoxin from Enteroaggregative Escherichia coli

Abstract: Enteroaggregative Escherichia coli (EAEC) is an emerging cause of diarrheal illness. Clinical data suggest that diarrhea caused by EAEC is predominantly secretory in nature, but the responsible enterotoxin has not been described. Work from our laboratories has implicated a ca. 108-kDa protein as a heat-labile enterotoxin and cytotoxin, as evidenced by rises in short-circuit current and falls in tissue resistance in rat jejunal tissue mounted in an Ussing chamber. Here we report the genetic cloning, sequencing, and characterization of this high-molecular-weight heat-labile toxin. The toxin (designated the plasmid-encoded toxin [Pet]) is encoded on the 65-MDa adherence-related plasmid of EAEC strain 042. Nucleotide sequence analysis suggests that the toxin is a member of the autotransporter class of proteins, characterized by the presence of a conserved C-terminal domain which forms a β-barrel pore in the bacterial outer membrane and through which the mature protein is transported. The Pet toxin is highly homologous to the EspP protease of enterohemorrhagic E. coli and to EspC of enteropathogenic E. coli, an as yet cryptic protein. In addition to its potential role in EAEC infection, Pet represents the first enterotoxin within the autotransporter class of secreted proteins. We hypothesize that other closely related members of this class may also produce enterotoxic effects.

The Luminosity Function and Initial Mass Function in the Galactic Bulge

Abstract: We present deep photometry obtained with the Hubble Space Telescope in a field in Baade's window in the Galactic bulge. We derive a luminosity function down to I ~ 24.3, or V ~ 27.5, corresponding to M ~ 0.3 M_☉. The luminosity function from the turnoff down to this level appears remarkably similar to that observed in the solar neighborhood. We derive a mass function using both an empirical local mass-luminosity relation and a mass-luminosity relation from recent stellar model calculations, allowing for the presence of binaries and photometric errors. The mass function has a power-law form with dN/dM ∝ M^(-2.2) for M ≳ 0.7 M_☉. However, we find strong evidence for a break in the mass function slope around 0.5–0.7 M_☉, with a significantly shallower slope at lower masses. The value of the slope for the low masses depends on the assumed binary fraction and the accuracy of our completeness correction. This mass function should directly reflect the initial mass function.

Effects of plant metabolites on the behavior and development of parasitic wasps

Abstract: Parasitoids are insects that spend their immature stages feeding from the tissues of other arthropods, eventually killing them Many insects that serve as hosts for parasitoids are herbivorous, and

On the Probability Density Function of Galactic Gas. I. Numerical Simulations and the Significance of the Polytropic Index

Abstract: We investigate the form of the one-point probability density function (pdf) for the density field of the interstellar medium using numerical simulations that successively reduce the number of physical processes included. Two-dimensional simulations of self-gravitating supersonic MHD turbulence, of supersonic self-gravitating hydrodynamic turbulence, and of decaying Burgers turbulence produce in all cases filamentary density structures and evidence for a power-law density pdf at large densities with logarithmic slope between -1.7 and -2.3. This suggests that a power-law shape of the pdf and the general filamentary morphology are the signature of the nonlinear advection operator. These results do not support previous claims that the pdf is lognormal. A series of one-dimensional simulations of forced supersonic polytropic turbulence is used to resolve the discrepancy. They suggest that the pdf is lognormal only for effective polytropic indices γ = 1 (or nearly lognormal for γ ≠ 1 if the Mach number is sufficiently small), while power laws develop for densities larger than the mean if γ < 1. We evaluate the polytropic index for conditions relevant to the cool interstellar medium using published cooling functions and different heating sources, finding that a lognormal pdf should probably occur at densities around 103 and is possible at larger densities, depending strongly on the role of gas-grain heating and cooling. Several applications are examined. First, we question a recent derivation of the initial mass function from the density pdf by Padoan, Nordlund, & Jones because (1) the pdf does not contain spatial information and (2) their derivation produces the most massive stars in the voids of the density distribution. Second, we illustrate how a distribution of ambient densities can alter the predicted form of the size distribution of expanding shells. Finally, a brief comparison is made with the density pdfs found in cosmological simulations.

Response regulator output in bacterial chemotaxis

Abstract: Chemotaxis responses in Escherichia coli are mediated by the phosphorylated response-regulator protein P-CheY. Biochemical and genetic studies have established the mechanisms by which the various components of the chemotaxis system, the membrane receptors and Che proteins function to modulate levels of CheY phosphorylation. Detailed models have been formulated to explain chemotaxis sensing in quantitative terms; however, the models cannot be adequately tested without knowledge of the quantitative relationship between P-CheY and bacterial swimming behavior. A computerized image analysis system was developed to collect extensive statistics on freeswimming and individual tethered cells. P-CheY levels were systematically varied by controlled expression of CheY in an E.coli strain lacking the CheY phosphatase, CheZ, and the receptor demethylating enzyme CheB. Tumbling frequency was found to vary with P-CheY concentration in a weakly sigmoidal fashion (apparent Hill coefficient approximately 2.5). This indicates that the high sensitivity of the chemotaxis system is not derived from highly cooperative interactions between P-CheY and the flagellar motor, but rather depends on nonlinear effects within the chemotaxis signal transduction network. The complex relationship between single flagella rotation and free-swimming behavior was examined; our results indicate that there is an additional level of information processing associated with interactions between the individual flagella. An allosteric model of the motor switching process is proposed which gives a good fit to the observed switching induced by P-CheY. Thus the level of intracellular P-CheY can be estimated from behavior determinations: approximately 30% of the intracellular pool of CheY appears to be phosphorylated in fully adapted wild-type cells.