National Autonomous University of Mexico

About: National Autonomous University of Mexico is a education organization based out in Mexico City, Distrito Federal, Mexico. It is known for research contribution in the topics: Population & Galaxy. The organization has 72868 authors who have published 127797 publications receiving 2285543 citations. The organization is also known as: UNAM & Universidad Nacional Autónoma de México.

Robust 4C-seq data analysis to screen for regulatory DNA interactions

Abstract: Regulatory DNA elements can control the expression of distant genes via physical interactions. Here we present a cost-effective methodology and computational analysis pipeline for robust characterization of the physical organization around selected promoters and other functional elements using chromosome conformation capture combined with high-throughput sequencing (4C-seq). Our approach can be multiplexed and routinely integrated with other functional genomics assays to facilitate physical characterization of gene regulation.

Countryside Biogeography of Neotropical Mammals: Conservation Opportunities in Agricultural Landscapes of Costa Rica

Abstract: The future of mammalian diversity in the tropics depends largely on the conservation value of human-dominated lands. We investigated the distribution of non-flying mammals in five habitats of southern Costa Rica: relatively extensive forest (227 ha), coffee plantation, pasture, coffee with adjacent forest remnant ( 5 km from relatively extensive forest, at least over the 40 years since forest clearance. Moreover, if hunting ceased, we expect that at least one of the locally extinct species could be reestablished in the existing landscape. Thus, there is an important opportunity to maintain and restore the diversity, abundance, and ecosystem roles of mammals in at least some human-dominated regions of the Neotropics.

Toward the Standard Population Synthesis Model of the X-Ray Background: Evolution of X-Ray Luminosity and Absorption Functions of Active Galactic Nuclei Including Compton-Thick Populations

Abstract: We present the most up-to-date X-ray luminosity function (XLF) and absorption function of Active Galactic Nuclei (AGNs) over the redshift range from 0 to 5, utilizing the largest, highly complete sample ever available obtained from surveys performed with Swift/BAT, MAXI, ASCA, XMM-Newton, Chandra, and ROSAT. The combined sample, including that of the Subaru/XMM-Newton Deep Survey, consists of 4039 detections in the soft (0.5--2 keV) and/or hard ($>2$ keV) band. We utilize a maximum likelihood method to reproduce the count-rate versus redshift distribution for each survey, by taking into account the evolution of the absorbed fraction, the contribution from Compton-thick (CTK) AGNs, and broad band spectra of AGNs including reflection components from tori based on the luminosity and redshift dependent unified scheme. We find that the shape of the XLF at $z \sim 1-3$ is significantly different from that in the local universe, for which the luminosity dependent density evolution model gives much better description than the luminosity and density evolution model. These results establish the standard population synthesis model of the X-Ray Background (XRB), which well reproduces the source counts, the observed fractions of CTK AGNs, and the spectrum of the hard XRB. The number ratio of CTK AGNs to the absorbed Compton-thin (CTN) AGNs is constrained to be $\approx$0.5--1.6 to produce the 20--50 keV XRB intensity within present uncertainties, by assuming that they follow the same evolution as CTN AGNs. The growth history of supermassive black holes is discussed based on the new AGN bolometric luminosity function.