Showing papers by "National Ocean Service published in 2011"
TL;DR: In this article, the authors present a review of work carried out by the eutrophication task group, and report their main findings to the scientific community, focusing on integrated approaches that account for physico-chemical and biological components.
Abstract: In 2009, following approval of the European Marine Strategy Framework Directive (MSFD, 2008/56/EC), the European Commission (EC) created task groups to develop guidance for eleven quality descriptors that form the basis for evaluating ecosystem function. The objective was to provide European countries with practical guidelines for implementing the MSFD, and to produce a Commission Decision that encapsulated key points of the work in a legal framework. This paper presents a review of work carried out by the eutrophication task group, and reports our main findings to the scientific community. On the basis of an operational, management-oriented definition, we discuss the main methodologies that could be used for coastal and marine eutrophication assessment. Emphasis is placed on integrated approaches that account for physico–chemical and biological components, and combine both pelagic and benthic symptoms of eutrophication, in keeping with the holistic nature of the MSFD. We highlight general features that any marine eutrophication model should possess, rather than making specific recommendations. European seas range from highly eutrophic systems such as the Baltic to nutrient-poor environments such as the Aegean Sea. From a physical perspective, marine waters range from high energy environments of the north east Atlantic to the permanent vertical stratification of the Black Sea. This review aimed to encapsulate that variability, recognizing that meaningful guidance should be flexible enough to accommodate the widely differing characteristics of European seas, and that this information is potentially relevant in marine ecosystems worldwide. Given the spatial extent of the MSFD, innovative approaches are required to allow meaningful monitoring and assessment. Consequently, substantial logistic and financial challenges will drive research in areas such as remote sensing of harmful algal blooms, in situ sensor development, and mathematical models. Our review takes into account related legislation, and in particular the EU Water Framework Directive (WFD – 2000/60/EC), which deals with river basins, including estuaries and a narrow coastal strip, in order to examine these issues within the framework of integrated coastal zone management.
393 citations
TL;DR: In this paper, the authors evaluate changes in gene expression of a marine mollusc, the eastern oyster Crassostrea virginica, associated with the physico-chemical conditions and the levels of metals and other contaminants in their environment.
Abstract: Understanding the mechanisms by which organisms adapt to environmental conditions is a fundamental question for ecology and evolution. In this study, we evaluate changes in gene expression of a marine mollusc, the eastern oyster Crassostrea virginica, associated with the physico-chemical conditions and the levels of metals and other contaminants in their environment. The results indicate that transcript signatures can effectively disentangle the complex interactive gene expression responses to the environment and are also capable of disentangling the complex dynamic effects of environmental factors on gene expression. In this context, the mapping of environment to gene and gene to environment is reciprocal and mutually reinforcing. In general, the response of transcripts to the environment is driven by major factors known to affect oyster physiology such as temperature, pH, salinity, and dissolved oxygen, with pollutant levels playing a relatively small role, at least within the range of concentrations found in the studied oyster habitats. Further, the two environmental factors that dominate these effects (temperature and pH) interact in a dynamic and nonlinear fashion to impact gene expression. Transcriptomic data obtained in our study provide insights into the mechanisms of physiological responses to temperature and pH in oysters that are consistent with the known effects of these factors on physiological functions of ectotherms and indicate important linkages between transcriptomics and physiological outcomes. Should these linkages hold in further studies and in other organisms, they may provide a novel integrated approach for assessing the impacts of climate change, ocean acidification and anthropogenic contaminants on aquatic organisms via relatively inexpensive microarray platforms.
156 citations
TL;DR: An integrative methodology for site selection of shellfish aquaculture that combines geographical information systems and dynamic farm-scale carrying capacity modeling was developed and tested, emphasizing the application in data-poor environments.
133 citations
TL;DR: An approximately 20 m depth or depth interval limit is identified to the use of bubble nets and it is suggested that this limit is due to the physics of bubble dispersal to which humpback whales have behaviourally adapted.
Abstract: Summary Humpback whales (Megaptera novaeangliae) employ a unique and complex foraging behaviour — bubble-netting — that involves expelling air underwater to form a vertical cylinder-ring of bubbles around prey. We used digital suction cup tags (DTAGs) that concurrently measure pitch, roll, heading, depth and sound (96 kHz sampling rate), to provide the first depiction of the underwater behaviours in which humpback whales engage during bubble-net feeding. Body mechanics and swim paths were analysed using custom visualization software that animates the underwater track of the whale and quantifies tag sensor values. Bubble production was identified aurally and through spectrographic analysis of tag audio records. We identified two classes of behaviour (upward-spiral; 6 animals, 118 events and double-loop; 3 animals, 182 events) that whales used to create bubble nets. Specifically, we show the actual swim path of the whales (e.g., number of revolutions, turning rate, depth interval of spiral), when and where in the process bubbles were expelled and the pattern of bubble expulsion used by the animals. Relative to other baleanopterids, bubble-netting humpbacks demonstrate increased manoeuvrability probably aided by a unique hydrodynamicly enhanced body form. We identified an approximately 20 m depth or depth interval limit to the use of bubble nets and suggest that this limit is due to the physics of bubble dispersal to which humpback whales have behaviourally adapted. All animals were feeding with at
127 citations
TL;DR: Microarray analysis provided transcriptomic evidence for N- but not P-limitation in K. brevis and transcriptomic responses to the addition of either N or P suggest a concerted program leading to the reactivation of chloroplast functions.
Abstract: The role of coastal nutrient sources in the persistence of Karenia brevis red tides in coastal waters of Florida is a contentious issue that warrants investigation into the regulation of nutrient responses in this dinoflagellate. In other phytoplankton studied, nutrient status is reflected by the expression levels of N- and P-responsive gene transcripts. In dinoflagellates, however, many processes are regulated post-transcriptionally. All nuclear encoded gene transcripts studied to date possess a 5' trans-spliced leader (SL) sequence suggestive, based on the trypanosome model, of post-transcriptional regulation. The current study therefore sought to determine if the transcriptome of K. brevis is responsive to nitrogen and phosphorus and is informative of nutrient status. Microarray analysis of N-depleted K. brevis cultures revealed an increase in the expression of transcripts involved in N-assimilation (nitrate and ammonium transporters, glutamine synthetases) relative to nutrient replete cells. In contrast, a transcriptional signal of P-starvation was not apparent despite evidence of P-starvation based on their rapid growth response to P-addition. To study transcriptome responses to nutrient addition, the limiting nutrient was added to depleted cells and changes in global gene expression were assessed over the first 48 hours following nutrient addition. Both N- and P-addition resulted in significant changes in approximately 4% of genes on the microarray, using a significance cutoff of 1.7-fold and p ≤ 10-4. By far, the earliest responding genes were dominated in both nutrient treatments by pentatricopeptide repeat (PPR) proteins, which increased in expression up to 3-fold by 1 h following nutrient addition. PPR proteins are nuclear encoded proteins involved in chloroplast and mitochondria RNA processing. Correspondingly, other functions enriched in response to both nutrients were photosystem and ribosomal genes. Microarray analysis provided transcriptomic evidence for N- but not P-limitation in K. brevis. Transcriptomic responses to the addition of either N or P suggest a concerted program leading to the reactivation of chloroplast functions. Even the earliest responding PPR protein transcripts possess a 5' SL sequence that suggests post-transcriptional control. Given the current state of knowledge of dinoflagellate gene regulation, it is currently unclear how these rapid changes in such transcript levels are achieved.
114 citations
TL;DR: This study marks the first reported occurrence of okadaic acid in marine mammals, and documents a unique co-occurrence of multiple HAB toxins associated with an unusual mortality event.
80 citations
TL;DR: Marine debris composition, density, abundance, and accumulation were evaluated in salt marshes in Carteret County, North Carolina seasonally and relationships between human use patterns and debris type were assessed.
68 citations
TL;DR: Water quality and daily cumulative health effects for bathers at a non-point source subtropical marine recreational beach are evaluated to better understand the inter-relationships between these factors and hence improve monitoring and pollution prevention techniques.
Abstract: Studies evaluating the relationship between microbes and human health at non-point source beaches are necessary for establishing criteria which would protect public health while minimizing economic burdens. The objective of this study was to evaluate water quality and daily cumulative health effects (gastrointestinal, skin, and respiratory illnesses) for bathers at a non-point source subtropical marine recreational beach in order to better understand the inter-relationships between these factors and hence improve monitoring and pollution prevention techniques. Daily composite samples were collected, during the Oceans and Human Health Beach Exposure Assessment and Characterization Health Epidemiologic Study conducted in Miami (Florida, USA) at a non-point source beach, and analyzed for several pathogens, microbial source tracking markers, indicator microbes, and environmental parameters. Analysis demonstrated that rainfall and tide were more influential, when compared to other environmental factors and source tracking markers, in determining the presence of both indicator microbes and pathogens. Antecedent rainfall and F+ coliphage detection in water should be further assessed to confirm their possible association with skin and gastrointestinal (GI) illness outcomes, respectively. The results of this research illustrate the potential complexity of beach systems characterized by non-point sources, and how more novel and comprehensive approaches are needed to assess beach water quality for the purpose of protecting bather health.
52 citations
TL;DR: In this paper, sea level anomalies and daily mean storm surges in the East Coast of the United States at Boston, Massachusetts; Atlantic City, New Jersey; Sewells Point (Norfolk), Virginia; and Charleston, South Carolina were compared during strong El Nino cool seasons.
Abstract: Climatologies of sea level anomalies (>0.05 m) and daily-mean storm surges (>0.3 m) are presented for the 1960–2010 cool seasons (October–April) along the East Coast of the United States at Boston, Massachusetts; Atlantic City, New Jersey; Sewells Point (Norfolk), Virginia; and Charleston, South Carolina. The high sea level anomaly and the number of storm surges, among the highest in the last half century during the 2009/10 cool season, are comparable during strong El Nino cool seasons. High numbers of daily storm surges occur in response to numerous East Coast extratropical cool-season storms and have a positive correlation with the El Nino phase of the El Nino–Southern Oscillation (ENSO). Patterns of anomalously high sea levels are attributed to El Nino–related changes to atmospheric pressure over the Gulf of Mexico and eastern Canada and to the wind field over the Northeast U.S. continental shelf.
49 citations
TL;DR: A population-level right-side bias similar to the 90/10 right-hand bias in humans is found in North Atlantic humpback whales, suggesting that lateralization develops, and continues to do so, beyond sexual maturity.
44 citations
TL;DR: Biological active ciguatoxins are detectable in blood, liver, muscle and brain, and continued to be excreted in urine and feces 4 days following exposure, and may be useful matrices for low-invasive testing methods for ciguatera clinical cases.
TL;DR: Within the ranges tested, a temperature of 23 °C and a salinity of 24 g/L appear to be optimal for culture of red porgy embryos, yolk-sac, and first-feeding stage larvae to d16ph.
TL;DR: The importance of both detecting and reporting the occurrence of heteroplasmy in wild populations in order to enhance the knowledge of both the introduction and the persistence of mutant mitochondrial haplotypes in the evolutionary process is stressed.
Abstract: In population genetics and phylogenetic studies, mitochondrial DNA (mtDNA) is commonly used for examining differences both between and within groups of individuals. For these studies, correct interpretation of every nucleotide position is crucial but can be complicated by the presence of ambiguous bases resulting from heteroplasmy. Particularly for non-model taxa, the presence of heteroplasmy in mtDNA is rarely reported, therefore, it is unclear how commonly it occurs and how it can affect phylogenetic relationships among taxa and the overall understanding of evolutionary processes. We examined the occurrence of both site and length heteroplasmy within the mtDNA of ten marine mammal species, for most of which mtDNA heteroplasmy has never been reported. After sequencing a portion of the mtDNA control region for 5,062 individuals, we found heteroplasmy in at least 2% of individuals from seven species, including Stenella frontalis where 58.9% were heteroplasmic. We verified the presence of true heteroplasmy, ruling out artifacts from amplification and sequencing methods and the presence of nuclear copies of mitochondrial genes. We found no evidence that mtDNA heteroplasmy influenced phylogenetic relationships, however, its occurrence does have the potential to increase the genetic diversity for all species in which it is found. This study stresses the importance of both detecting and reporting the occurrence of heteroplasmy in wild populations in order to enhance the knowledge of both the introduction and the persistence of mutant mitochondrial haplotypes in the evolutionary process.
TL;DR: This work provides first confirmation that Hawaiian monk seals are exposed to significant levels of ciguatoxins and first evidence of transfer of cigUatoxin to marine mammals.
Abstract: Ciguatoxins are potent algal neurotoxins that concentrate in fish preyed upon by the critically endangered Hawaiian monk seal (Monachus schauinslandi). The only report for Hawaiian monk seal exposu...
TL;DR: In this article, stable isotope analysis and mixing models (IsoSource) were used to compare food webs in adjacent young (created) and mature (natural) salt marshes.
Abstract: Understanding wetland food webs is critical for effective habitat management, restoration and conservation. Microalgae are recognized as key food sources for marsh invertebrates but the importance of different groups under various conditions is rarely examined. We tested the hypothesis that faunal utilization of microalgae, and cyanobacteria in particular, is significant in Southern California created and natural salt marshes but varies with habitat type (creek bank versus marsh interior) and season (spring versus autumn). We used stable isotope analysis and mixing models (IsoSource) to compare food webs in adjacent young (created) and mature (natural) salt marshes. Isotopic values of some primary producers, macrofauna, epifauna, and fish demonstrated significant differences between the adjacent salt marshes. δ13C and δ34S values of the benthic microalgal community varied with taxonomic composition (diatoms versus cyanobacteria) and to a lesser extent with season. Depleted δ15N values of benthic diatoms and macroalgae indicated that N2 fixed within algal mats was recycled within the benthic algal community. Marsh fauna, including most major macrofauna taxal, Cerithidea, and Fundulus, also exhibited seasonal differences in isotopic composition, and Cerithidea and selected macrofauna (oligochaetes, polychaetes) from the marsh interior were more enriched in 13C and depleted in 15N than those from the creek bank. In the young marsh, the cyanobacteria contributed a minimum of 17–100% of the primary production in food webs supporting macrofauna, and cyanobacteria contributed at least 40% of the primary production included in Cerithidea and Fundulus food webs. A wider range of primary producers contributed to food webs in the mature marsh. Cyanobacteria were a greater source of trophic support for macrofauna from the marsh interior than the creek bank, whereas Spartina was a more important food source for creek bank macrofauna in both marshes. Insect larvae largely consumed cyanobacteria, whereas polychaetes exhibited greater utilization of Spartina. Phytoplankton was the primary food resource for mussels in both marshes. Although the spatial and temporal complexity of food webs has traditionally been collapsed into the study of relatively simplified food webs, isotope signatures reveal fine-scale patterns in food web structure that may be used to make more accurate assessments of ecosystem state. Accurate interpretation of marsh trophic structure using natural abundance stable isotopes requires fine-scale resolution in space and time, a large number of samples, and a high level of taxonomic resolution.
TL;DR: In this paper, the role of top-down versus bottom-up factors in regulating picophyto plankton growth and overall phytoplankton size structure in a eutrophic estuary was assessed.
Abstract: We assessed the role of top-down versus bottom-up factors in regulating picophyto- plankton (PicoP) growth and overall phytoplankton size structure in a eutrophic estuary. PicoP bio- mass reached an annual maximum in summer/fall and was positively correlated with temperature. Ephemeral blooms (chlorophyll a > 20 µg l -1 ) of PicoP were observed in the upper and middle regions of the estuary despite inorganic nitrogen concentrations <1 µmol l -1 . Nutrient-amended PicoP growth rates were similar to in situ growth rates in the upper estuary, and PicoP biomass was negatively cor- related with river-derived inorganic nitrogen concentrations, indicating that regenerated nutrients are a major source of nitrogen supporting PicoP growth. Microzooplankton grazing rates routinely exceeded PicoP growth rates during summer; therefore, grazing must have become uncoupled from PicoP growth on timescales shorter than the interval between grazing experiments (i.e. 2 to 4 wk) for PicoP to have bloomed. Field data point to the possibility of trophic cascades involving copepods, pro- tistan grazers, and phytoplankton as a mechanism for this growth-grazing uncoupling. These and other recent findings indicate that bottom-up factors alone cannot explain the PicoP blooms observed in some estuarine systems and emphasize the need for grazing control studies to better understand the regulation of primary production.
TL;DR: This compound is the first reported cytotoxic natural product isolated and fully characterized from a Trichodesmium species and possesses cytotoxicity activity against GH(4)C(1) rat pituitary and Neuro-2a mouse neuroblastoma cells.
Abstract: Trichodesmium is a suspected toxin-producing nonheterocystous cyanobacteria ubiquitous in tropical, subtropical, and temperate seas. The genus is known for its ability to fix nitrogen and form massive blooms. In oligotrophic seas, it can dominate the biomass and be a major component of oceanic primary production and global nitrogen cycling. Numerous reports suggest Trichodesmium-derived toxins are a cause of death of fish, crabs, and bivalves. Laboratory studies have demonstrated neurotoxic effects in T. thiebautii cell extracts and field reports suggest respiratory distress and contact dermatitis of humans at collection sites. However, Trichodesmium toxins have not been identified and characterized. Here, we report the extraction of a lipophilic toxin from field-collected T. thiebautii using a purification method of several chromatographic techniques, nuclear magnetic resonance (NMR), mass spectroscopy (MS), and Fourier transformed-infrared spectroscopy (FT-IR). Trichotoxin has a molecular formula of C(20)H(27)ClO and a mass of 318 m/z and possesses cytotoxic activity against GH(4)C(1) rat pituitary and Neuro-2a mouse neuroblastoma cells. A detection method using liquid chromatography/mass spectrometry (LC/MS) was developed. This compound is the first reported cytotoxic natural product isolated and fully characterized from a Trichodesmium species.
TL;DR: It is demonstrated that both noncovalent and covalent interactions can occur between brevetoxin-B and HSA with in vitro experiments.
Abstract: Brevetoxins are neurotoxins produced by marine dinoflagellates, primarily Karenia brevis, and can cause intoxication and even mortality of marine species, affect human health through the consumption of brevetoxin-contaminated shellfish, and effect respiratory irritation through aerosol exposure at coastal areas. Brevetoxin-A and brevetoxin-B, the major brevetoxins produced in algae, are metabolized to a series of amino acid and peptide-related derivatives in shellfish through the reactions of the amino acid residue cysteine with an α,β-unsaturated aldehyde group. In this paper, covalent interactions between brevetoxin and proteins were investigated using brevetoxin-B and human serum albumin (HSA) as a model. It is demonstrated that both noncovalent and covalent interactions can occur between brevetoxin-B and HSA with in vitro experiments. Covalent adducts of brevetoxin-B and HSA were generated under physiological conditions and reduced with sodium borohydride based on the reaction conditions of single amino acid residues with brevetoxin-B. LC/MS analysis of toxin-treated HSA recognized the formation of the intact protein adducts with primarily one and two toxin molecules attached to one HSA molecule. HSA treated with/without brevetoxin-B was digested with trypsin, trypsin following chymotrypsin, and Pronase, respectively, for LC/MS analysis of adduction sites. Brevetoxin-B was found to react primarily with Cys(34) and His(3) and with His and Lys at other sites of HSA with variable reactivity and with Lys in general the least reactive.
TL;DR: Overall, use of this quantitation standard and internal control signify a great advance over traditional positive controls and suggest that molecular techniques for viral analysis could become standardized for routine water quality monitoring.
14 Jul 2011-Journal of Environmental Science and Health Part B-pesticides Food Contaminants and Agricultural Wastes
TL;DR: Most of the effects of permethrin on fish cellular stress enzymes and survival occurred at concentrations much higher than those typically measured in the environment, however, inhibition of splenocyte proliferation in juvenile red drum occurred at approximately twice that of measured permETHrin concentrations in surface water.
Abstract: Limited toxicity data are available for estuarine and marine species and the widely used pyrethroid insecticide, permethrin. This study determined acute effects of permethrin on survival, lipid peroxidation, acetylcholinesterase activity, and splenocyte proliferation for two fish species found in South Carolina estuaries; juvenile red drum (Sciaenops ocellatus) and adult mummichog (Fundulus heteroclitus). Juvenile S. ocellatus were significantly more sensitive than adult F. heteroclitus to permethrin exposure, with a 96-h LC50 value of 8 μg/L determined for red drum compared to 23 μg/L for mummichog. Lipid peroxidation activity of the liver increased in permethrin-treated fish compared to control animals after 24 h and decreased after 96 h. Permethrin had no effect on acetylcholinesterase activity of the brain at the concentrations tested. Permethrin exposure significantly inhibited splenocyte proliferation, indicating an immunosuppressive effect. Most of the effects of permethrin on fish cellular stress enzymes and survival occurred at concentrations much higher than those typically measured in the environment. However, inhibition of splenocyte proliferation in juvenile red drum occurred at approximately twice that of measured permethrin concentrations in surface water. These findings may prove useful to the future management and regulation of pyrethroid insecticide use near estuarine habitats.
TL;DR: In this article, an approach that couples coastal ecosystem modeling with integrated environmental assessment methodologies to support coastal management is presented, where the focus is to support the development of an ecosystem approach to aquaculture management including interactions with watershed substance loading.
Abstract: This article presents an approach that couples coastal ecosystem modeling with integrated environmental assessment methodologies to support coastal management. The focus is to support the development of an ecosystem approach to aquaculture management including interactions with watershed substance loading. A Chinese bay, with intense aquaculture and multiple catchment uses, and where significant modeling efforts were undertaken is used as a case study. The ecosystem model developed for this bay is used to run scenarios that test the local management strategy for nutrient reduction. The corresponding ecological and economic impacts of the managers’ scenarios are analyzed by means of the Differential Drivers-Pressure-State-Impact-Response (ΔDPSIR) analysis. Emphasis is given to the analysis of the eutrophication process in the bay including present eutrophic condition and the expected changes due to the simulated scenarios. For this purpose, the Assessment of Estuarine Trophic Status (ASSETS) screening mode...
24 May 2011-Journal of Environmental Science and Health Part B-pesticides Food Contaminants and Agricultural Wastes
TL;DR: It is confirmed that phenothrin is highly toxic to grass shrimp and suggests that both adult and larval grass shrimp are appropriate life stages for risk assessments, and there was a significant downward trend in larval LPx levels.
Abstract: Phenothrin is a synthetic pyrethroid used as a contact insecticide in mosquito control programs. This study compared the toxicity of phenothrin to adult, larval and embryonic grass shrimp (Palaemonetes pugio) and examined oxidative stress responses in adult and larval grass shrimp. The adult 24-h LC50 was 0.341 μg/L (95 % confidence intervals 0.282-0.412) and the 96-h LC50 was 0.161 μg/L (95 % CI 0.128-0.203 μg/L). The larval 24-h LC50 was 0.50 μg/L (95 % CI 0.441-0.568) and the 96-h LC50 was 0.154 μg/L (95 % CI 0.139-0.170 μg/L). In the presence of sediment, the 24-h LC50 was 6.30 μg/L (95 % CI 5.00-7.44 μg/L) for adults and 0.771 μg/L (95 % CI 0.630-0.944) for larvae. The sublethal biomarkers glutathione and lipid peroxidase (LPx) were examined after 96-h phenothrin exposure at five concentrations, and there were no statistically significant differences in these levels in adults or larvae compared to controls. There was a significant downward trend in larval LPx levels. This research confirms that phenothrin is highly toxic to grass shrimp and suggests that both adult and larval grass shrimp are appropriate life stages for risk assessments.