Showing papers by "National University of Comahue published in 2017"

A synthesis of radial growth patterns preceding tree mortality

Abstract: Tree mortality is a key factor influencing forest functions and dynamics, but our understanding of the mechanisms leading to mortality and the associated changes in tree growth rates are still limited. We compiled a new pan-conti- nental tree-ring width database from sites where both dead and living trees were sampled (2970 dead and 4224 living trees from 190 sites, including 36 species), and compared early and recent growth rates between trees that died and those that survived a given mortality event. We observed a decrease in radial growth before death in ca. 84% of the mortality events. The extent and duration of these reductions were highly variable (1–100 years in 96% of events) due to the complex interactions among study species and the source(s) of mortality. Strong and long-lasting declines were found for gymnosperms, shade- and drought-tolerant species, and trees that died from competition. Angiosperms and trees that died due to biotic attacks (especially bark-beetles) typically showed relatively small and short-term growth reductions. Our analysis did not highlight any universal trade-off between early growth and tree longevity within a species, although this result may also reflect high variability in sampling design among sites. The intersite and interspecific variability in growth patterns before mortality provides valuable information on the nature of the mortality process, which is consistent with our understanding of the physiological mechanisms leading to mortality. Abrupt changes in growth immediately before death can be associated with generalized hydraulic failure and/or bark-beetle attack, while long-term decrease in growth may be associated with a gradual decline in hydraulic performance coupled with depletion in carbon reserves. Our results imply that growth-based mortality algorithms may be a powerful tool for predicting gymnosperm mortality induced by chronic stress, but not necessarily so for angiosperms and in case of intense drought or bark-beetle outbreaks.

Tree mortality across biomes is promoted by drought intensity, lower wood density and higher specific leaf area

Abstract: Drought events are increasing globally, and reports of consequent forest mortality are widespread. However, due to a lack of a quantitative global synthesis, it is still not clear whether drought-induced mortality rates differ among global biomes and whether functional traits influence the risk of drought-induced mortality. To address these uncertainties, we performed a global meta-analysis of 58 studies of drought-induced forest mortality. Mortality rates were modelled as a function of drought, temperature, biomes, phylogenetic and functional groups and functional traits. We identified a consistent global-scale response, where mortality increased with drought severity [log mortality (trees trees-1 year-1 ) increased 0.46 (95% CI = 0.2-0.7) with one SPEI unit drought intensity]. We found no significant differences in the magnitude of the response depending on forest biomes or between angiosperms and gymnosperms or evergreen and deciduous tree species. Functional traits explained some of the variation in drought responses between species (i.e. increased from 30 to 37% when wood density and specific leaf area were included). Tree species with denser wood and lower specific leaf area showed lower mortality responses. Our results illustrate the value of functional traits for understanding patterns of drought-induced tree mortality and suggest that mortality could become increasingly widespread in the future.

Biological synthesis of metallic nanoparticles: plants, animals and microbial aspects

Abstract: The green synthesis (GS) of different metallic nanoparticles (MNPs) has re-evaluated plants, animals and microorganisms for their natural potential to reduce metallic ions into neutral atoms at no expense of toxic and hazardous chemicals. Contrary to chemically synthesized MNPs, GS offers advantages of enhanced biocompatibility and thus has better scope for biomedical applications. Plant, animals and microorganisms belonging to lower and higher taxonomic groups have been experimented for GS of MNPs, such as gold (Au), silver (Ag), copper oxide (CuO), zinc oxide (ZnO), iron (Fe2O3), palladium (Pd), platinum (Pt), nickel oxide (NiO) and magnesium oxide (MgO). Among the different plant groups used for GS, angiosperms and algae have been explored the most with great success. GS with animal-derived biomaterials, such as chitin, silk (sericin, fibroin and spider silk) or cell extract of invertebrates have also been reported. Gram positive and gram negative bacteria, different fungal species and virus particles have also shown their abilities in the reduction of metal ions. However, not a thumb rule, most of the reducing agents sourced from living world also act as capping agents and render MNPs less toxic or more biocompatible. The most unexplored area so far in GS is the mechanism studies for different natural reducing agents expect for few of them, such as tea and neem plants. This review encompasses the recent advances in the GS of MNPs using plants, animals and microorganisms and analyzes the key points and further discusses the pros and cons of GS in respect of chemical synthesis.

Structural overshoot of tree growth with climate variability and the global spectrum of drought-induced forest dieback

Abstract: Ongoing climate change poses significant threats to plant function and distribution. Increased temperatures and altered precipitation regimes amplify drought frequency and intensity, elevating plant stress and mortality. Large-scale forest mortality events will have far-reaching impacts on carbon and hydrological cycling, biodiversity, and ecosystem services. However, biogeographical theory and global vegetation models poorly represent recent forest die-off patterns. Furthermore, as trees are sessile and long-lived, their responses to climate extremes are substantially dependent on historical factors. We show that periods of favourable climatic and management conditions that facilitate abundant tree growth can lead to structural overshoot of aboveground tree biomass due to a subsequent temporal mismatch between water demand and availability. When environmental favourability declines, increases in water and temperature stress that are protracted, rapid, or both, drive a gradient of tree structural responses that can modify forest self-thinning relationships. Responses ranging from premature leaf senescence and partial canopy dieback to whole-tree mortality reduce canopy leaf area during the stress period and for a lagged recovery window thereafter. Such temporal mismatches of water requirements from availability can occur at local to regional scales throughout a species geographical range. As climate change projections predict large future fluctuations in both wet and dry conditions, we expect forests to become increasingly structurally mismatched to water availability and thus overbuilt during more stressful episodes. By accounting for the historical context of biomass development, our approach can explain previously problematic aspects of large-scale forest mortality, such as why it can occur throughout the range of a species and yet still be locally highly variable, and why some events seem readily attributable to an ongoing drought while others do not. This refined understanding can facilitate better projections of structural overshoot responses, enabling improved prediction of changes in forest distribution and function from regional to global scales.

The database of the PREDICTS (Projecting Responses of Ecological Diversity In Changing Terrestrial Systems) project

Abstract: The PREDICTS project—Projecting Responses of Ecological Diversity In Changing Terrestrial Systems (www.predicts.org.uk)—has collated from published studies a large, reasonably representative database of comparable samples of biodiversity from multiple sites that differ in the nature or intensity of human impacts relating to land use. We have used this evidence base to develop global and regional statistical models of how local biodiversity responds to these measures. We describe and make freely available this 2016 release of the database, containing more than 3.2 million records sampled at over 26,000 locations and representing over 47,000 species. We outline how the database can help in answering a range of questions in ecology and conservation biology. To our knowledge, this is the largest and most geographically and taxonomically representative database of spatial comparisons of biodiversity that has been collated to date; it will be useful to researchers and international efforts wishing to model and understand the global status of biodiversity.

Biological invasions in forest ecosystems

Abstract: Forests play critical roles in global ecosystem processes and provide numerous services to society. But forests are increasingly affected by a variety of human influences, especially those resulting from biological invasions. Species invading forests include woody and herbaceous plants, many animal species including mammals and invertebrates, as well as a variety of microorganisms such as fungi, oomycetes, bacteria and viruses. These species have diverse ecological roles including primary producers, herbivores, predators, animal pathogens, plant pathogens, decomposers, pollinators and other mutualists. Although most non-native species have negligible effects on forests, a few have profound and often cascading impacts. These impacts include alteration of tree species composition, changes in forest succession, declines in biological diversity, and alteration of nutrient, carbon and water cycles. Many of these result from competition with native species but also trophic influences that may result in major changes in food web structure. Naturally regenerating forests around the world have been substantially altered by invading species but planted forests also are at risk. Non-native tree species are widely planted in many parts of the world for production of wood and fibre, and are chosen because of their frequently exceptional growth in their new environment. This greater growth is due, in part, to escape from herbivores and pathogens that exist in their native ranges. Over time, some pest species can “catch-up” with their hosts, leading to subsequent declines in forest productivity. Other impacts result when native herbivores or pathogens adapt to exotic trees or when novel associations form between pathogens and vectors. Additionally, planted non-native trees are sometimes invasive and can have substantial adverse effects on adjacent natural areas. Management of invasions in forests includes prevention of arrival, eradication of nascent populations, biological control, selection for resistance in host trees, and the use of cultural practices (silviculture and restoration) to minimize invader impacts. In the future, the worlds’ forests are likely to be subject to increasing numbers of invasions, and effective management will require greater international cooperation and interdisciplinary integration.

The emerging science of linked plant-fungal invasions.

Abstract: Contents 'Summary' 1314 I. 'Introduction' 1315 II. 'Simplification of complex networks into interaction motifs' 1316 III. 'Plant–fungal interactions and plant invasion dynamics' 1322 IV. 'Predicting where plant–fungal interactions matter: plant−symbiont specificity, dependence and effect size' 1323 V. 'Spatial context of linked plant–fungal invasions' 1325 VI. 'Impacts of linked plant–fungal invasions on ecosystem processes' 1326 VII. 'Management implications' 1326 VIII. 'Conclusions' 1327 'Acknowledgements' 1328 References 1328 Summary Invasions of alien plants are typically studied as invasions of individual species, yet interactions between plants and symbiotic fungi (mutualists and potential pathogens) affect plant survival, physiological traits, and reproduction and hence invasion success. Studies show that plant–fungal associations are frequently key drivers of plant invasion success and impact, but clear conceptual frameworks and integration across studies are needed to move beyond a series of case studies towards a more predictive understanding. Here, we consider linked plant–fungal invasions from the perspective of plant and fungal origin, simplified to the least complex representations or ‘motifs’. By characterizing these interaction motifs, parallels in invasion processes between pathogen and mutualist fungi become clear, although the outcomes are often opposite in effect. These interaction motifs provide hypotheses for fungal-driven dynamics behind observed plant invasion trajectories. In some situations, the effects of plant–fungal interactions are inconsistent or negligible. Variability in when and where different interaction motifs matter may be driven by specificity in the plant–fungal interaction, the size of the effect of the symbiosis (negative to positive) on plants and the dependence (obligate to facultative) of the plant−fungal interaction. Linked plant–fungal invasions can transform communities and ecosystem function, with potential for persistent legacies preventing ecosystem restoration.

Direct and indirect climate controls predict heterogeneous early-mid 21st century wildfire burned area across western and boreal North America.

Abstract: Predicting wildfire under future conditions is complicated by complex interrelated drivers operating across large spatial scales. Annual area burned (AAB) is a useful index of global wildfire activity. Current and antecedent seasonal climatic conditions, and the timing of snowpack melt, have been suggested as important drivers of AAB. As climate warms, seasonal climate and snowpack co-vary in intricate ways, influencing fire at continental and sub-continental scales. We used independent records of seasonal climate and snow cover duration (last date of permanent snowpack, LDPS) and cell-based Structural Equation Models (SEM) to separate direct (climatic) and indirect (snow cover) effects on relative changes in AAB under future climatic scenarios across western and boreal North America. To isolate seasonal climate variables with the greatest effect on AAB, we ran multiple regression models of log-transformed AAB on seasonal climate variables and LDPS. We used the results of multiple regressions to project future AAB using GCM ensemble climate variables and LDPS, and validated model predictions with recent AAB trends. Direct influences of spring and winter temperatures on AAB are larger and more widespread than the indirect effect mediated by changes in LDPS in most areas. Despite significant warming trends and reductions in snow cover duration, projected responses of AAB to early-mid 21st century are heterogeneous across the continent. Changes in AAB range from strongly increasing (one order of magnitude increases in AAB) to moderately decreasing (more than halving of baseline AAB). Annual wildfire area burned in coming decades is likely to be highly geographically heterogeneous, reflecting interacting regional and seasonal climate drivers of fire occurrence and spread.

How to know the fungi: combining field inventories and DNA-barcoding to document fungal diversity.

Abstract: The fungi kingdom is among the most diverse eukaryotic lineages on Earth with estimates of several million extant species (O’Brien et al., 2005; Blackwell, 2011; Taylor et al., 2014). Fungi play critical roles in carbon andnutrient cycling of terrestrial and aquatic ecosystems, and they are important pathogens and mutualists (Read & Perez-Moreno, 2003; Taylor et al., 2012; Grossart et al., 2016). More than 80% of plant species form symbioses with fungi and these symbioses have been crucial to the colonization of terrestrial ecosystems (Field et al., 2015a; Selosse et al., 2015). Despite their impacts on primary ecosystem functions, assessments of fungal biodiversity estimate that only c. 10% of fungal species have been described (Bass & Richards, 2011; Hibbett et al., 2011). Traditionally, specimen-based taxonomic studies have been the only way to discover new species. Because most fungi have microscopic life-stages and convergent morphological features (Rivas-Plata & Lumbsch, 2011; Wynns, 2015), many fungal groups remain severely undersampled. DNA-barcoding and highthroughput sequencing methods have provided a new framework for studying fungal biodiversity (Fierer et al., 2012; Schoch et al., 2012; Myrold et al., 2014), and diversity estimates based on environmental sequences have increased exponentially. Although these ‘sequence-based classification and identification’ methods are a powerful means to rapidly detect hidden diversity, careful interpretation of these data is needed to make accurate inferences (K~oljalg et al., 2013; Lindahl et al., 2013; Nguyen et al., 2015; Hibbett et al., 2016). In particular, many environmental sequences cannot be associated with a known fungal species or lineage. This remains a major challenge to decipher fungal community composition and understand ecological roles of fungi in leaf litter, soil, or inside plants (Yahr et al., 2016). In some cases, these fungi are truly undescribed and their ecological roles are unknown but in other cases they represent described taxa for which no sequence is available (Nagy et al., 2011; Nilsson et al., 2016). DNA barcoding of herbarium specimens and culture collections is extremely valuable to link unidentified sequences to known taxa (e.g. Brock et al., 2009; Nagy et al., 2011; Osmundson et al., 2013; Garnica et al., 2016).DNA sequences have been generated from fungal type specimens > 200 years old (Larsson & Jacobsson, 2004), but in many cases obtaining sequences from historical material is challenging (Dentinger et al., 2010). Today’s threats to biodiversity from habitat loss and climate change are occurring at an unprecedented scale, and it is possible that many species may become extinct before they have been discovered (Costello et al., 2013; Monastersky, 2014). In the need to describe and protect as many species as possible we addressed the following questions: what are the best methods to rapidly document fungal biodiversity? Are traditional, specimen-based approaches still useful?

Microservices Identification Through Interface Analysis

Abstract: The microservices architectural style is gaining more and more momentum for the development of applications as suites of small, autonomous, and conversational services, which are then easy to understand, deploy and scale. One of today’s problems is finding the adequate granularity and cohesiveness of microservices, both when starting a new project and when thinking of transforming, evolving and scaling existing applications. To cope with these problems, the paper proposes a solution based on the semantic similarity of foreseen/available functionality described through OpenAPI specifications. By leveraging a reference vocabulary, our approach identifies potential candidate microservices, as fine-grained groups of cohesive operations (and associated resources). We compared our approach against a state-of-the-art tool, sampled microservices-based applications and decomposed a large dataset of Web APIs. Results show that our approach is able to find suitable decompositions in some 80% of the cases, while providing early insights about the right granularity and cohesiveness of obtained microservices.

Ecology and management of invasive Pinaceae around the world: progress and challenges

Abstract: Fil: Nunez, Martin Andres. Consejo Nacional de Investigaciones Cientificas y Tecnicas. Centro Cientifico Tecnologico Conicet - Patagonia Norte. Instituto de Investigaciones en Biodiversidad y Medioambiente. Universidad Nacional del Comahue. Centro Regional Universidad Bariloche. Instituto de Investigaciones en Biodiversidad y Medioambiente; Argentina

Global decline of bumblebees is phylogenetically structured and inversely related to species range size and pathogen incidence.

Abstract: Conservation biology can profit greatly from incorporating a phylogenetic perspective into analyses of patterns and drivers of species extinction risk. We applied such an approach to analyse patterns of bumblebee (Bombus) decline. We assembled a database representing approximately 43% of the circa 260 globally known species, which included species extinction risk assessments following the International Union fo Conservation of Nature Red List categories and criteria, and information on species traits presumably associated with bumblebee decline. We quantified the strength of phylogenetic signal in decline, range size, tongue length and parasite presence. Overall, about one-third of the assessed bumblebees are declining and declining species are not randomly distributed across the Bombus phylogeny. Susceptible species were over-represented in the subgenus Thoracobombus (approx. 64%) and under-represented in the subgenus Pyrobombus (approx. 6%). Phylogenetic logistic regressions revealed that species with small geographical ranges and those in which none of three internal parasites were reported (i.e. Crithidia bombi, Nosema spp. or Locustacarus buchneri) were particularly vulnerable. Bumblebee evolutionary history will be deeply eroded if most species from threatened clades, particularly those stemming from basal nodes, become finally extinct. The habitat of species with restricted distribution should be protected and the importance of pathogen tolerance/resistance as mechanisms to deal with pathogens needs urgent research.

Tumor Necrosis Factor-Mediated Survival of CD169+ Cells Promotes Immune Activation during Vesicular Stomatitis Virus Infection.

Abstract: Innate immune activation is essential to mount an effective antiviral response and to prime adaptive immunity. Although a crucial role of CD169+ cells during vesicular stomatitis virus (VSV) infections is increasingly recognized, factors regulating CD169+ cells during viral infections remain unclear. Here, we show that tumor necrosis factor is produced by CD11b+ Ly6C+ Ly6G+ cells following infection with VSV. The absence of TNF or TNF receptor 1 (TNFR1) resulted in reduced numbers of CD169+ cells and in reduced type I interferon (IFN-I) production during VSV infection, with a severe disease outcome. Specifically, TNF triggered RelA translocation into the nuclei of CD169+ cells; this translocation was inhibited when the paracaspase MALT-1 was absent. Consequently, MALT1 deficiency resulted in reduced VSV replication, defective innate immune activation, and development of severe disease. These findings indicate that TNF mediates the maintenance of CD169+ cells and innate and adaptive immune activation during VSV infection.IMPORTANCE Over the last decade, strategically placed CD169+ metallophilic macrophages in the marginal zone of the murine spleen and lymph nodes (LN) have been shown to play a very important role in host defense against viral pathogens. CD169+ macrophages have been shown to activate innate and adaptive immunity via "enforced virus replication," a controlled amplification of virus particles. However, the factors regulating the CD169+ macrophages remain to be studied. In this paper, we show that after vesicular stomatitis virus infection, phagocytes produce tumor necrosis factor (TNF), which signals via TNFR1, and promote enforced virus replication in CD169+ macrophages. Consequently, lack of TNF or TNFR1 resulted in defective immune activation and VSV clearance.

The effects of ant nests on soil fertility and plant performance: a meta-analysis

Abstract: Ants are recognized as one of the major sources of soil disturbance world-wide. However, this view is largely based on isolated studies and qualitative reviews. Here, for the first time, we quantitatively determined whether ant nests affect soil fertility and plant performance, and identified the possible sources of variation of these effects. Using Bayesian mixed-models meta-analysis, we tested the hypotheses that ant effects on soil fertility and plant performance depend on the substrate sampled, ant feeding type, latitude, habitat and the plant response variable measured. Ant nests showed higher nutrient and cation content than adjacent non-nest soil samples, but similar pH. Nutrient content was higher in ant refuse materials than in nest soils. The fertilizer effect of ant nests was also higher in dry habitats than in grasslands or savannas. Cation content was higher in nests of plant-feeding ants than in nests of omnivorous species, and lower in nests from agro-ecosystems than in nests from any other habitat. Plants showed higher green/root biomass and fitness on ant nests soils than in adjacent, non-nest sites; but plant density and diversity were unaffected by the presence of ant nests. Root growth was particularly higher in refuse materials than in ant nest soils, in leaf-cutting ant nests and in deserts habitats. Our results confirm the major role of ant nests in influencing soil fertility and vegetation patterns and provide information about the factors that mediate these effects. First, ant nests improve soil fertility mainly through the accumulation of refuse materials. Thus, different refuse dump locations (external or in underground nest chambers) could benefit different vegetation life-forms. Second, ant nests could increase plant diversity at larger spatial scales only if the identity of favoured plants changes along environmental gradients (i.e. enhancing β-diversity). Third, ant species that feed on plants play a relevant role fertilizing soils, which may balance their known influence as primary consumers. Fourth, the effects of ant nests as fertility islands are larger in arid lands, possibly because fertility is intrinsically lower in these habitats. Overall, this study provide novel and quantitative evidence confirming that ant nests are key soil modifiers, emphasizing their role as ecological engineers.

Effects of biochar on copper immobilization and soil microbial communities in a metal-contaminated soil

Abstract: Copper (Cu) contamination has been increasing in land ecosystems. Biochars (BCs) and arbuscular mycorrhizal fungi (AMF) are known to bind metals, and metallophyte can remove metals from soils. Will BC in combination with AMF contain the Cu uptake by a metallophyte growing in a metal-contaminated soil? The objective of this study was to investigate the effects of BCs on the Cu immobilization and over soil microbial communities in a metal-contaminated soil in the presence of AMF and metallophyte. Two BCs were produced from chicken manure (CMB) and oat hull (OHB). A Cu-contaminated sandy soil (338 mg kg−1) was incubated with CMB and OHB (0, 1, and 5 % w/w) for 2 weeks. Metallophyte Oenothera picensis was grown in pots (500 mL) containing the incubated soils in a controlled greenhouse for 6 months. A number of analyses were conducted after the harvest. These include plant biomass weight, microbial basal respiration, and dehydrogenase activity (DHA), AMF root colonization, spore number, and glomalin production; changes in fungal and bacterial communities, Cu fractions in soil phases, and Cu uptake in plant tissues. The BCs increased the soil pH, decreased easily exchangeable fraction of Cu, and increased organic matter and residual fraction of Cu. The BCs provided favorable habitat for microorganisms, thereby increasing basal respiration. The CMB increased DHA by ∼62 and ∼574 %, respectively, for the low and high doses. Similarly, the OHB increased soil microbial activity by ∼68 and ∼72 %, respectively, for the low and high doses. AMF root colonization, spore number, and total glomalin-related soil protein (GRSP) production increased by ∼3, ∼2, and ∼3 times, respectively, in soils treated with 1 % OHB. Despite being a metalophyte, O. picensis could not uptake Cu efficiently. Root and shoot Cu concentrations decreased or changed insignificantly in most BC treatments. The results show that the BCs decreased bioavailable Cu, decreased Cu uptake by O. picensis, improved habitat for microorganisms, and enhanced plant growth in Cu-contaminated soil. This suggests that biochars may be utilized to remediate Cu-contaminated soils.

Ecosystem dynamics and management after forest die-off: a global synthesis with conceptual state-and-transition models

Abstract: Broad-scale forest die-off associated with drought and heat has now been reported from every forested continent, posing a global-scale challenge to forest management. Climate-driven die-off is frequently compounded with other drivers of tree mortality, such as altered land use, wildfire, and invasive species, making forest management increasingly complex. Facing similar challenges, rangeland managers have widely adopted the approach of developing conceptual models that identify key ecosystem states and major types of transitions between those states, known as “state-and-transition models” (S&T models). Using expert opinion and available research, the development of such conceptual S&T models has proven useful in anticipating ecosystem changes and identifying management actions to undertake or to avoid. In cases where detailed data are available, S&T models can be developed into probabilistic predictions, but even where data are insufficient to predict transition probabilities, conceptual S&T models can provide valuable insights for managing a given ecosystem and for comparing and contrasting different ecosystem dynamics. We assembled a synthesis of 14 forest die-off case studies from around the globe, each with sufficient information to infer impacts on forest dynamics and to inform management options following a forest die-off event. For each, we developed a conceptual S&T model to identify alternative ecosystem states, pathways of ecosystem change, and points where management interventions have been, or may be, successful in arresting or reversing undesirable changes. We found that our diverse set of mortality case studies fit into three broad classes of ecosystem trajectories: (1) single-state transition shifts, (2) ecological cascading responses and feedbacks, and (3) complex dynamics where multiple interactions, mortality drivers, and impacts create a range of possible state transition responses. We integrate monitoring and management goals in a framework aimed to facilitate development of conceptual S&T models for other forest die-off events. Our results highlight that although forest die-off events across the globe encompass many different underlying drivers and pathways of ecosystem change, there are commonalities in opportunities for successful management intervention.

Rapid recovery of Patagonian plant–insect associations after the end-Cretaceous extinction

Abstract: The Southern Hemisphere may have provided biodiversity refugia after the Cretaceous/Palaeogene (K/Pg) mass extinction. However, few extinction and recovery studies have been conducted in the terrestrial realm using well-dated macrofossil sites that span the latest Cretaceous (late Maastrichtian) and early Palaeocene (Danian) outside western interior North America (WINA). Here, we analyse insect-feeding damage on 3,646 fossil leaves from the latest Maastrichtian and three time slices of the Danian in Chubut, Patagonia, Argentina (palaeolatitude approximately 50° S). We test the southern refugial hypothesis and the broader hypothesis that the extinction and recovery of insect herbivores, a central component of terrestrial food webs, differed substantially from WINA at locations far south of the Chicxulub impact structure in Mexico. We find greater insect-damage diversity in Patagonia than in WINA during both the Maastrichtian and Danian, indicating a previously unknown insect richness. As in WINA, the total diversity of Patagonian insect damage decreased from the Cretaceous to the Palaeocene, but recovery to pre-extinction levels occurred within approximately 4 Myr compared with approximately 9 Myr in WINA. As for WINA, there is no convincing evidence for survival of any of the diverse Cretaceous leaf miners in Patagonia, indicating a severe K/Pg extinction of host-specialized insects and no refugium. However, a striking difference from WINA is that diverse, novel leaf mines are present at all Danian sites, demonstrating a considerably more rapid recovery of specialized herbivores and terrestrial food webs. Our results support the emerging idea of large-scale geographic heterogeneity in extinction and recovery from the end-Cretaceous catastrophe.

In mammalian foetal testes, SOX9 regulates expression of its target genes by binding to genomic regions with conserved signatures.

Abstract: In mammalian embryonic gonads, SOX9 is required for the determination of Sertoli cells that orchestrate testis morphogenesis. To identify genetic networks directly regulated by SOX9, we combined analysis of SOX9-bound chromatin regions from murine and bovine foetal testes with sequencing of RNA samples from mouse testes lacking Sox9. We found that SOX9 controls a conserved genetic programme that involves most of the sex-determining genes. In foetal testes, SOX9 modulates both transcription and directly or indirectly sex-specific differential splicing of its target genes through binding to genomic regions with sequence motifs that are conserved among mammals and that we called 'Sertoli Cell Signature' (SCS). The SCS is characterized by a precise organization of binding motifs for the Sertoli cell reprogramming factors SOX9, GATA4 and DMRT1. As SOX9 biological role in mammalian gonads is to determine Sertoli cells, we correlated this genomic signature with the presence of SOX9 on chromatin in foetal testes, therefore equating this signature to a genomic bar code of the fate of foetal Sertoli cells. Starting from the hypothesis that nuclear factors that bind to genomic regions with SCS could functionally interact with SOX9, we identified TRIM28 as a new SOX9 partner in foetal testes.

Southern Annular Mode drives multicentury wildfire activity in southern South America

Abstract: The Southern Annular Mode (SAM) is the main driver of climate variability at mid to high latitudes in the Southern Hemisphere, affecting wildfire activity, which in turn pollutes the air and contributes to human health problems and mortality, and potentially provides strong feedback to the climate system through emissions and land cover changes. Here we report the largest Southern Hemisphere network of annually resolved tree ring fire histories, consisting of 1,767 fire-scarred trees from 97 sites (from 22 °S to 54 °S) in southern South America (SAS), to quantify the coupling of SAM and regional wildfire variability using recently created multicentury proxy indices of SAM for the years 1531–2010 AD. We show that at interannual time scales, as well as at multidecadal time scales across 37–54 °S, latitudinal gradient elevated wildfire activity is synchronous with positive phases of the SAM over the years 1665–1995. Positive phases of the SAM are associated primarily with warm conditions in these biomass-rich forests, in which widespread fire activity depends on fuel desiccation. Climate modeling studies indicate that greenhouse gases will force SAM into its positive phase even if stratospheric ozone returns to normal levels, so that climate conditions conducive to widespread fire activity in SAS will continue throughout the 21st century.

Classification of Reynolds phytoplankton functional groups using individual traits and machine learning techniques

Abstract: The Reynolds Functional Groups (RFG) classification scheme is an informative and widely used method in ecological studies of freshwater phytoplankton. It clusters species with similar traits, as well as common environmental sensitivities and tolerances. However, researchers face the difficulty to classify species into RFG because it relies in expert opinion, taxonomical knowledge and environmental information, which are not always accessible. Thus, a step forward is to build general statistical models to classify species into RFG. Under the hypothesis that an organism's response to environmental conditions determines their functional traits, here represented by the RFG, we predict that morphology and classification into broad taxonomic groups will explain RFG independently from environmental information and expert knowledge. To evaluate the predictive ability of morphological traits (e.g. volume) and taxonomic affiliation (e.g. chroococcal Cyanobacteria) as discriminant variables of RFG, we compiled 1,300 species (264 waterbodies) and applied Random Forest (RF) and Classification and Regression Trees (CART). We divided the data to train the models and test their performance. RF successfully classified species into the 28 RFG (only c. 10% test error) with an average individual RFG success rate of 84.6 (range = 33%–100%). This is a relatively high percentage of success from an ecological point of view. It suggests that the selected variables are able to reconstruct the RFG and represent well environmental preferences, without including information about local environmental conditions as classifiers. Our results reinforce the functional basis of the RFG and support both morphological traits and taxonomic classification as good proxies of phytoplankton responses to environmental conditions. A dichotomous key based on the CART was constructed, and an R code to classify species into the RFG is freely available. This work may help users to classify species into the RFG, including those that were not previously listed in the Reynolds classification system.

Pinus contorta invasions increase wildfire fuel loads and may create a positive feedback with fire.

Abstract: Invasive plant species that have the potential to alter fire regimes have significant impacts on native ecosystems. Concern that pine invasions in the Southern Hemisphere will increase fire activity and severity and subsequently promote further pine invasion prompted us to examine the potential for feedbacks between Pinus contorta invasions and fire in Patagonia and New Zealand. We determined how fuel loads and fire effects were altered by P. contorta invasion. We also examined post-fire plant communities across invasion gradients at a subset of sites to assess how invasion alters the post-fire vegetation trajectory. We found that fuel loads and soil heating during simulated fire increase with increasing P. contorta invasion age or density at all sites. However, P. contorta density did not always increase post-fire. In the largest fire, P. contorta density only increased significantly post-fire where the pre-fire P. contorta density was above an invasion threshold. Below this threshold, P. contorta did not dominate after fire and plant communities responded to fire in a similar manner as uninvaded communities. The positive feedback observed at high densities is caused by the accumulation of fuel that in turn results in greater soil heating during fires and high P. contorta density post-fire. Therefore, a positive feedback may form between P. contorta invasions and fire, but only above an invasion density threshold. These results suggest that management of pine invasions before they reach the invasion density threshold is important for reducing fire risk and preventing a transition to an alternate ecosystem state dominated by pines and novel understory plant communities.

Removal of Ciprofloxacin from Aqueous Solutions Using Pillared Clays.

Abstract: Fil: Roca Jalil, Maria Eugenia. Consejo Nacional de Investigaciones Cientificas y Tecnicas. Centro Cientifico Tecnologico Conicet - Patagonia Norte; Argentina. Universidad Nacional del Comahue; Argentina

Chitosan-Derived Iron Oxide Systems for Magnetically Guided and Efficient Water Purification Processes from Polycyclic Aromatic Hydrocarbons

Abstract: Chitosan and pyrolyzed chitosan, acting as protective frameworks of magnetic nanoparticles (magnetite/maghemite and/or metallic Fe), have been investigated to be used in magnetically guided water remediation processes from polycyclic aromatic hydrocarbons (PAHs) Chitosan-derived magnet-sensitive materials were first obtained by a one-step coprecipitation method, and then two carbon-derived magnetic chitosan materials were obtained under N2 gas flow at 550 and 800 °C, respectively The obtained materials were investigated by means of X-ray diffraction (XRD), FTIR spectroscopy, scanning electron microscopy (SEM), high resolution transmission electron microscopy (HRTEM), atomic force microscopy (AFM), magnetic force microscopy (MFM), and magnetization measurements Thermal treatment conditions, along with the amounts of chitosan used in the synthesis processes, played a critical role in the crystal structure and magnetic properties of the obtained nanomaterials The adsorption capacity of chitosan-derived m

Comparative vinification assays with selected Patagonian strains of Oenococcus oeni and Lactobacillus plantarum

Abstract: The performance of Patagonian Lactobacillus plantarum and Oenococcus oeni strains as malolactic starter cultures was compared. Two autochthonous strains of each species were selected, based on the presence of aroma-related genes, and inoculated in sterile wine of high ethanol content. The effects of initial inoculum size and acclimation treatment on the efficiency of malolactic fermentation (MLF) were analyzed for each strain. O. oeni strains were able to successfully conduct the MLF only when the inoculum concentration was higher than 1.10 8 CFU/mL and cells were acclimated in sublethal ethanol concentrations. The increase of ethanol concentration in the acclimation medium also improved the kinetics of malic acid consumption. Successful MLF with L. plantarum strains required lower inocula and no acclimation treatment. In addition, these strains showed a better profile of aroma-related genes than O. oeni . L. plantarum strains appeared to be more efficient than O. oeni strains as candidates for malolactic starter cultures to be used in Patagonian red wines.

Effects of biological legacies and herbivory on fuels and flammability traits: A long-term experimental study of alternative stable states

Abstract: Summary Ecological memory, often determined by the extent and type of retained biological legacies present following disturbance, may produce persistent landscape patterns. However, after fire, the persistence or switch to an alternative state may depend on the complex interplay of ecological memory (biological legacies) and potential effects of new external factors influencing the post-fire environment. The current study assesses both the strength of ecological memory resulting from biological legacies of pre-burn vegetation types as well as post-fire effects of livestock. Following a severe fire in 1999, we set up a network of long-term exclosures to examine the effects of legacies and cumulative herbivory by cattle on fuel types, amounts, distribution, flammability and microenvironmental conditions in two post-fire communities representing alternative fire-driven states: pyrophobic Nothofagus pumilio subalpine forests and pyrophytic Nothofagus antarctica tall shrublands in northwestern Patagonia, Argentina. Our results show that the retained post-disturbance legacies of tall shrublands and subalpine forests largely determine fuel and flammability traits of the post-fire plant communities 16 years after fire. The importance of biological legacies retained from the unburned plant communities was reflected by the substantially higher amounts of total fine fuel, greater vertical and horizontal fuel continuity and the higher temperatures reached during experimental tissue combustion at post-fire shrubland compared to post-fire forest sites. We show that herbivores may produce antagonistic effects on flammability by decreasing tissue ignitability, total fine fuel and litter depth, and disrupting the vertical and horizontal fine fuel continuity, therefore reducing the probability of fire propagation. However, cattle can increase ratios of dead to live fine fuels, reduce soil moisture, and inhibit tree height growth to canopy size, consequently impeding the development of a closed pyrophobic forest canopy. Synthesis. Our results support the hypothesis that biological legacies, most importantly the dominance by pyrophytic woody plants that resprout vigorously vs. the dominance by pyrophobic obligate seeders, favour fuel and flammability characteristics at the community level which reinforce the mechanisms maintaining pyrophytic shrublands vs. pyrophobic forests. Herbivory by introduced cattle can partially blur sharp pyrophobic/pyrophytic state boundaries by promoting the development of novel post-fire transitional states.

Education can improve the negative perception of a threatened long-lived scavenging bird, the Andean condor

Abstract: Human-wildlife conflicts currently represent one of the main conservation problems for wildlife species around the world. Vultures have serious conservation concerns, many of which are related to people's adverse perception about them due to the belief that they prey on livestock. Our aim was to assess local perception and the factors influencing people's perception of the largest scavenging bird in South America, the Andean condor. For this, we interviewed 112 people from Valle Fertil, San Juan province, a rural area of central west Argentina. Overall, people in the area mostly have an elementary education, and their most important activity is livestock rearing. The results showed that, in general, most people perceive the Andean condor as an injurious species and, in fact, some people recognize that they still kill condors. We identified two major factors that affect this perception, the education level of villagers and their relationship with livestock ranching. Our study suggests that conservation of condors and other similar scavengers depends on education programs designed to change the negative perception people have about them. Such programs should be particularly focused on ranchers since they are the ones who have the worst perception of these scavengers. We suggest that highlighting the central ecological role of scavengers and recovering their cultural value would be fundamental to reverse their persecution and their negative perception by people.