Institution
Oregon State University
Education•Corvallis, Oregon, United States•
About: Oregon State University is a education organization based out in Corvallis, Oregon, United States. It is known for research contribution in the topics: Population & Gene. The organization has 28192 authors who have published 64044 publications receiving 2634108 citations. The organization is also known as: Oregon Agricultural College & OSU.
Topics: Population, Gene, Context (language use), Climate change, Soil water
Papers published on a yearly basis
Papers
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TL;DR: It is suggested that fundamental constraints on decomposer physiologies lead to predictable global-scale patterns in net N release during decomposition.
Abstract: Litter decomposition provides the primary source of mineral nitrogen (N) for biological activity in most terrestrial ecosystems. A 10-year decomposition experiment in 21 sites from seven biomes found that net N release from leaf litter is dominantly driven by the initial tissue N concentration and mass remaining regardless of climate, edaphic conditions, or biota. Arid grasslands exposed to high ultraviolet radiation were an exception, where net N release was insensitive to initial N. Roots released N linearly with decomposition and exhibited little net N immobilization. We suggest that fundamental constraints on decomposer physiologies lead to predictable global-scale patterns in net N release during decomposition.
1,088 citations
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TL;DR: A high-performance atomic Fe catalyst derived from chemically Fe-doped zeolitic imidazolate frameworks (ZIFs) by directly bonding Fe ions to imidAZolate ligands within 3D frameworks holds great promise as a replacement for Pt in future PEMFCs.
Abstract: It remains a grand challenge to replace platinum group metal (PGM) catalysts with earth-abundant materials for the oxygen reduction reaction (ORR) in acidic media, which is crucial for large-scale deployment of proton exchange membrane fuel cells (PEMFCs). Here, we report a high-performance atomic Fe catalyst derived from chemically Fe-doped zeolitic imidazolate frameworks (ZIFs) by directly bonding Fe ions to imidazolate ligands within 3D frameworks. Although the ZIF was identified as a promising precursor, the new synthetic chemistry enables the creation of well-dispersed atomic Fe sites embedded into porous carbon without the formation of aggregates. The size of catalyst particles is tunable through synthesizing Fe-doped ZIF nanocrystal precursors in a wide range from 20 to 1000 nm followed by one-step thermal activation. Similar to Pt nanoparticles, the unique size control without altering chemical properties afforded by this approach is able to increase the number of PGM-free active sites. The best O...
1,086 citations
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Los Alamos National Laboratory1, University of New Mexico2, Novozymes3, University of Provence4, VTT Technical Research Centre of Finland5, Pacific Northwest National Laboratory6, Joint Genome Institute7, United States Department of Agriculture8, Vienna University of Technology9, Pontifical Catholic University of Chile10, Oregon State University11, Genencor12
TL;DR: This work assembled 89 scaffolds to generate 34 Mbp of nearly contiguous T. reesei genome sequence comprising 9,129 predicted gene models, providing a roadmap for constructing enhanced T.Reesei strains for industrial applications such as biofuel production.
Abstract: Trichoderma reesei is the main industrial source of cellulases and hemicellulases used to depolymerize biomass to simple sugars that are converted to chemical intermediates and biofuels, such as ethanol. We assembled 89 scaffolds (sets of ordered and oriented contigs) to generate 34 Mbp of nearly contiguous T. reesei genome sequence comprising 9,129 predicted gene models. Unexpectedly, considering the industrial utility and effectiveness of the carbohydrate-active enzymes of T. reesei, its genome encodes fewer cellulases and hemicellulases than any other sequenced fungus able to hydrolyze plant cell wall polysaccharides. Many T. reesei genes encoding carbohydrate-active enzymes are distributed nonrandomly in clusters that lie between regions of synteny with other Sordariomycetes. Numerous genes encoding biosynthetic pathways for secondary metabolites may promote survival of T. reesei in its competitive soil habitat, but genome analysis provided little mechanistic insight into its extraordinary capacity for protein secretion. Our analysis, coupled with the genome sequence data, provides a roadmap for constructing enhanced T. reesei strains for industrial applications such as biofuel production.
1,085 citations
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University of North Texas1, East Malling Research Station2, Plant & Food Research3, Oregon State University4, University of Maryland, College Park5, Indiana University6, Virginia Tech7, Georgia Institute of Technology8, University of New Hampshire9, United States Department of Agriculture10, Hoffmann-La Roche11, University of Auckland12, Rutgers University13, University of the Western Cape14, University of Florida15, University of Chile16, Andrés Bello National University17, Weizmann Institute of Science18, University of Pittsburgh19, University of Georgia20, Technische Universität München21, University of Illinois at Urbana–Champaign22, Institut national de la recherche agronomique23
TL;DR: New phylogenetic analysis of 154 protein-coding genes suggests that assignment of Populus to Malvidae, rather than Fabidae, is warranted, and macrosyntenic relationships between Fragaria and Prunus predict a hypothetical ancestral Rosaceae genome that had nine chromosomes.
Abstract: The woodland strawberry, Fragaria vesca (2n = 2x = 14), is a versatile experimental plant system. This diminutive herbaceous perennial has a small genome (240 Mb), is amenable to genetic transformation and shares substantial sequence identity with the cultivated strawberry (Fragaria × ananassa) and other economically important rosaceous plants. Here we report the draft F. vesca genome, which was sequenced to ×39 coverage using second-generation technology, assembled de novo and then anchored to the genetic linkage map into seven pseudochromosomes. This diploid strawberry sequence lacks the large genome duplications seen in other rosids. Gene prediction modeling identified 34,809 genes, with most being supported by transcriptome mapping. Genes critical to valuable horticultural traits including flavor, nutritional value and flowering time were identified. Macrosyntenic relationships between Fragaria and Prunus predict a hypothetical ancestral Rosaceae genome that had nine chromosomes. New phylogenetic analysis of 154 protein-coding genes suggests that assignment of Populus to Malvidae, rather than Fabidae, is warranted.
1,085 citations
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TL;DR: Twenty five years after its first enunciation, IPM is recognized as one of the most robust constructs to arise in the agricultural sciences during the second half of the twentieth century and followed multiple paths in several countries and reached beyond the confines of entomological sciences.
Abstract: Twenty five years after its first enunciation, IPM is recognized as one of the most robust constructs to arise in the agricultural sciences during the second half of the twentieth century. The history of IPM, however, can be traced back to the late 1800s when ecology was identified as the foundation for scientific plant protection. That history, since the advent of modern organosynthetic pesticides, acquired elements of drama, intrigue, jealousy, and controversy that mark the path of many great scientific or technological achievements. Evolution of IPM followed multiple paths in several countries and reached beyond the confines of entomological sciences. Time and space constraints, however, bias this review toward entomology, among the plant protection sciences, and give it an obvious US slant, despite the global impact of IPM.
1,084 citations
Authors
Showing all 28447 results
Name | H-index | Papers | Citations |
---|---|---|---|
Robert Stone | 160 | 1756 | 167901 |
Menachem Elimelech | 157 | 547 | 95285 |
Thomas J. Smith | 140 | 1775 | 113919 |
Harold A. Mooney | 135 | 450 | 100404 |
Jerry M. Melillo | 134 | 383 | 68894 |
John F. Thompson | 132 | 1420 | 95894 |
Thomas N. Williams | 132 | 1145 | 95109 |
Peter M. Vitousek | 127 | 352 | 96184 |
Steven W. Running | 126 | 355 | 76265 |
Vincenzo Di Marzo | 126 | 659 | 60240 |
J. D. Hansen | 122 | 975 | 76198 |
Peter Molnar | 118 | 446 | 53480 |
Michael R. Hoffmann | 109 | 500 | 63474 |
David Pollard | 108 | 438 | 39550 |
David J. Hill | 107 | 1364 | 57746 |