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Institution

Smithsonian Tropical Research Institute

FacilityPanama City, Panama
About: Smithsonian Tropical Research Institute is a facility organization based out in Panama City, Panama. It is known for research contribution in the topics: Population & Species richness. The organization has 1693 authors who have published 5998 publications receiving 363993 citations. The organization is also known as: STRI.


Papers
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Journal ArticleDOI
27 Jul 2001-Science
TL;DR: Paleoecological, archaeological, and historical data show that time lags of decades to centuries occurred between the onset of overfishing and consequent changes in ecological communities, because unfished species of similar trophic level assumed the ecological roles of over-fished species until they too were overfished or died of epidemic diseases related to overcrowding as mentioned in this paper.
Abstract: Ecological extinction caused by overfishing precedes all other pervasive human disturbance to coastal ecosystems, including pollution, degradation of water quality, and anthropogenic climate change. Historical abundances of large consumer species were fantastically large in comparison with recent observations. Paleoecological, archaeological, and historical data show that time lags of decades to centuries occurred between the onset of overfishing and consequent changes in ecological communities, because unfished species of similar trophic level assumed the ecological roles of overfished species until they too were overfished or died of epidemic diseases related to overcrowding. Retrospective data not only help to clarify underlying causes and rates of ecological change, but they also demonstrate achievable goals for restoration and management of coastal ecosystems that could not even be contemplated based on the limited perspective of recent observations alone.

5,411 citations

Journal ArticleDOI
03 Nov 2006-Science
TL;DR: The authors analyzed local experiments, long-term regional time series, and global fisheries data to test how biodiversity loss affects marine ecosystem services across temporal and spatial scales, concluding that marine biodiversity loss is increasingly impairing the ocean's capacity to provide food, maintain water quality, and recover from perturbations.
Abstract: Human-dominated marine ecosystems are experiencing accelerating loss of populations and species, with largely unknown consequences. We analyzed local experiments, long-term regional time series, and global fisheries data to test how biodiversity loss affects marine ecosystem services across temporal and spatial scales. Overall, rates of resource collapse increased and recovery potential, stability, and water quality decreased exponentially with declining diversity. Restoration of biodiversity, in contrast, increased productivity fourfold and decreased variability by 21%, on average. We conclude that marine biodiversity loss is increasingly impairing the ocean's capacity to provide food, maintain water quality, and recover from perturbations. Yet available data suggest that at this point, these trends are still reversible.

3,672 citations

Journal ArticleDOI
15 Aug 2003-Science
TL;DR: International integration of management strategies that support reef resilience need to be vigorously implemented, and complemented by strong policy decisions to reduce the rate of global warming.
Abstract: The diversity, frequency, and scale of human impacts on coral reefs are increasing to the extent that reefs are threatened globally. Projected increases in carbon dioxide and temperature over the next 50 years exceed the conditions under which coral reefs have flourished over the past half-million years. However, reefs will change rather than disappear entirely, with some species already showing far greater tolerance to climate change and coral bleaching than others. International integration of management strategies that support reef resilience need to be vigorously implemented, and complemented by strong policy decisions to reduce the rate of global warming.

3,664 citations

Journal ArticleDOI
23 Jun 2006-Science
TL;DR: Reconstructed time lines, causes, and consequences of change in 12 once diverse and productive estuaries and coastal seas worldwide show similar patterns: Human impacts have depleted >90% of formerly important species, destroyed >65% of seagrass and wetland habitat, degraded water quality, and accelerated species invasions.
Abstract: Estuarine and coastal transformation is as old as civilization yet has dramatically accelerated over the past 150 to 300 years. Reconstructed time lines, causes, and consequences of change in 12 once diverse and productive estuaries and coastal seas worldwide show similar patterns: Human impacts have depleted >90% of formerly important species, destroyed >65% of seagrass and wetland habitat, degraded water quality, and accelerated species invasions. Twentieth-century conservation efforts achieved partial recovery of upper trophic levels but have so far failed to restore former ecosystem structure and function. Our results provide detailed historical baselines and quantitative targets for ecosystem-based management and marine conservation.

2,795 citations

Journal ArticleDOI
Mingxun Wang1, Jeremy Carver1, Vanessa V. Phelan2, Laura M. Sanchez2, Neha Garg2, Yao Peng1, Don D. Nguyen1, Jeramie D. Watrous2, Clifford A. Kapono1, Tal Luzzatto-Knaan2, Carla Porto2, Amina Bouslimani2, Alexey V. Melnik2, Michael J. Meehan2, Wei-Ting Liu3, Max Crüsemann4, Paul D. Boudreau4, Eduardo Esquenazi, Mario Sandoval-Calderón5, Roland D. Kersten6, Laura A. Pace2, Robert A. Quinn7, Katherine R. Duncan8, Cheng-Chih Hsu1, Dimitrios J. Floros1, Ronnie G. Gavilan, Karin Kleigrewe4, Trent R. Northen9, Rachel J. Dutton10, Delphine Parrot11, Erin E. Carlson12, Bertrand Aigle13, Charlotte Frydenlund Michelsen14, Lars Jelsbak14, Christian Sohlenkamp5, Pavel A. Pevzner1, Anna Edlund15, Anna Edlund16, Jeffrey S. McLean17, Jeffrey S. McLean15, Jörn Piel18, Brian T. Murphy19, Lena Gerwick4, Chih-Chuang Liaw20, Yu-Liang Yang21, Hans-Ulrich Humpf22, Maria Maansson14, Robert A. Keyzers23, Amy C. Sims24, Andrew R. Johnson25, Ashley M. Sidebottom25, Brian E. Sedio26, Andreas Klitgaard14, Charles B. Larson4, Charles B. Larson2, Cristopher A. Boya P., Daniel Torres-Mendoza, David Gonzalez2, Denise Brentan Silva27, Denise Brentan Silva28, Lucas Miranda Marques27, Daniel P. Demarque27, Egle Pociute, Ellis C. O’Neill4, Enora Briand11, Enora Briand4, Eric J. N. Helfrich18, Eve A. Granatosky29, Evgenia Glukhov4, Florian Ryffel18, Hailey Houson, Hosein Mohimani1, Jenan J. Kharbush4, Yi Zeng1, Julia A. Vorholt18, Kenji L. Kurita30, Pep Charusanti1, Kerry L. McPhail31, Kristian Fog Nielsen14, Lisa Vuong, Maryam Elfeki19, Matthew F. Traxler32, Niclas Engene33, Nobuhiro Koyama2, Oliver B. Vining31, Ralph S. Baric24, Ricardo Pianta Rodrigues da Silva27, Samantha J. Mascuch4, Sophie Tomasi11, Stefan Jenkins9, Venkat R. Macherla, Thomas Hoffman, Vinayak Agarwal4, Philip G. Williams34, Jingqui Dai34, Ram P. Neupane34, Joshua R. Gurr34, Andrés M. C. Rodríguez27, Anne Lamsa1, Chen Zhang1, Kathleen Dorrestein2, Brendan M. Duggan2, Jehad Almaliti2, Pierre-Marie Allard35, Prasad Phapale, Louis-Félix Nothias36, Theodore Alexandrov, Marc Litaudon36, Jean-Luc Wolfender35, Jennifer E. Kyle37, Thomas O. Metz37, Tyler Peryea38, Dac-Trung Nguyen38, Danielle VanLeer38, Paul Shinn38, Ajit Jadhav38, Rolf Müller, Katrina M. Waters37, Wenyuan Shi15, Xueting Liu39, Lixin Zhang39, Rob Knight1, Paul R. Jensen4, Bernhard O. Palsson1, Kit Pogliano1, Roger G. Linington30, Marcelino Gutiérrez, Norberto Peporine Lopes27, William H. Gerwick2, William H. Gerwick4, Bradley S. Moore2, Bradley S. Moore4, Pieter C. Dorrestein4, Pieter C. Dorrestein2, Nuno Bandeira1, Nuno Bandeira2 
TL;DR: In GNPS, crowdsourced curation of freely available community-wide reference MS libraries will underpin improved annotations and data-driven social-networking should facilitate identification of spectra and foster collaborations.
Abstract: The potential of the diverse chemistries present in natural products (NP) for biotechnology and medicine remains untapped because NP databases are not searchable with raw data and the NP community has no way to share data other than in published papers. Although mass spectrometry (MS) techniques are well-suited to high-throughput characterization of NP, there is a pressing need for an infrastructure to enable sharing and curation of data. We present Global Natural Products Social Molecular Networking (GNPS; http://gnps.ucsd.edu), an open-access knowledge base for community-wide organization and sharing of raw, processed or identified tandem mass (MS/MS) spectrometry data. In GNPS, crowdsourced curation of freely available community-wide reference MS libraries will underpin improved annotations. Data-driven social-networking should facilitate identification of spectra and foster collaborations. We also introduce the concept of 'living data' through continuous reanalysis of deposited data.

2,365 citations


Authors

Showing all 1705 results

NameH-indexPapersCitations
William F. Laurance11847056464
Robert E. Ricklefs11044945584
Stephen P. Hubbell10124941904
S. Joseph Wright8927425996
Martin Wikelski8942025821
Stephen W. Pacala8822241595
Michael J. Ryan8541026998
Jens-Christian Svenning8553128460
Peter W. Glynn8557028397
Mark D. Bertness8418327928
Benjamin L. Turner8338123581
William H. Gerwick8249625205
Richard Condit8222826685
Stuart A. West8229026982
Fernando Valladares7933427611
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Performance
Metrics
No. of papers from the Institution in previous years
YearPapers
20238
202216
2021429
2020449
2019393
2018345