Showing papers by "Swedish University of Agricultural Sciences published in 1996"

The chemistry and antioxidant properties of tocopherols and tocotrienols

Abstract: This article is a review of the fundamental chemistry of the tocopherols and tocotrienols relevant to their antioxidant action. Despite the general agreement that α-tocopherol is the most efficient antioxidant and vitamin E homologuein vivo, there was always a considerable discrepancy in its “absolute” and “relative” antioxidant effectivenessin vitro, especially when compared to γ-tocopherol. Many chemical, physical, biochemical, physicochemical, and other factors seem responsible for the observed discrepancy between the relative antioxidant potencies of the tocopherolsin vivo andin vitro. This paper aims at highlighting some possible reasons for the observed differences between the tocopherols (α-, β-, γ-, and δ-) in relation to their interactions with the important chemical species involved in lipid peroxidation, specifically trace metal ions, singlet oxygen, nitrogen oxides, and antioxidant synergists. Although literature reports related to the chemistry of the tocotrienols are quite meager, they also were included in the discussion in virtue of their structural and functional resemblance to the tocopherols.

Auxin as a positional signal in pattern formation in plants.

Abstract: By using a novel, extremely sensitive and specific gas chromatography-mass spectrometry technique we demonstrate in Pinus sylvestris (L.) trees the existence of a steep radial concentration gradient of the endogenous auxin, indole-3-acetic acid, over the lateral meristem responsible for the bulk of plant secondary growth, the vascular cambium. This is the first evidence that plant morphogens, such as indole-3-acetic acid, occur in concentration gradients over developing tissues. This finding gives evidence for a regulatory system in plants based on positional signaling, similar to animal systems.

First Gene on the Avian W Chromosome (CHD) Provides a Tag for Universal Sexing of Non-Ratite Birds

Abstract: The avian W chromosome shares many features with the mammalian Y chromosome: it is small, mostly heterochromatic, and filled with large repetitive arrays. No gene so far been assigned to the W chromosome in any bird species and, as a practical consequence, a general tag for avian gender identification on the molecular level is lacking. Here I describe the isolation of a chicken homologue to the mouse chromo-helicase-DNA binding (CHD) gene which encodes a protein involved in global regulation of transcriptional activation on the chromatin level. The avian CHD gene exists in two genomic copies, one of which termed CHD-W) was located on the W chromosome in all non-ratio species investigated. The gene displays extreme levels of sequence conservation since chicken CHD-W and mouse CHD are 82.9% and 95.6% identical at the nucleotide and amino acid level respectively. Molecular sexing can be accomplished in probably all non-ratite birds by hybridizing Southern blots with CHD probes, PCR-based gender identification is also demonstrated. A general system for avian sexing should facilitate many studies of behaviour, evolutionary ecology, genetics, and evolution.

A wide-range survey of cross-species microsatellite amplification in birds.

Abstract: The possibility to perform cross-species microsatellite amplification in birds was surveyed by analysing sets of primers developed from the swallow and the pied flycatcher genomes on a panel of 48 different bird species. In total, 162 cases (species/marker combinations) of heterologous amplification were recorded. Ten amplification products were sequenced and all were found to be true homologues of the original loci. There was a significant and negative relationship between microsatellite performance and evolutionary distance between the original species and the tested species. As a rough indicator of expected cross-species microsatellite performance we estimate that 50% of markers will reveal polymorphism in a species with a DNA-DNA hybridization delta T(m)H value of 5 separating it from the original species. This corresponds to a divergence time of = 11 million years before present for passerine birds. The established relationship between performance and evolutionary distance agrees very well with data obtained from some mammalian species. The proportion of polymorphic loci among those markers that amplified decreased with increasing genetic distance, suggesting that few long repeats are preserved during evolution. One of the swallow markers, HrU2, amplified a specific product in all species analyzed and will thus allow access of nuclear sequence data over a broad range of species. The only predictor of cross-species performance was the amount of non-specific amplification seen in the original species. An analysis of 10 species from within the family Hirundinidae with the swallow primers consistently revealed extensive polymorphism with average probabilities of identical genotypes ranging from 6 x 10(-4) to 6 x 10(-7). There were distinct allele frequency differences between the Hirundinidae species and we envisage that microsatellite cross-species amplification will be a useful tool in phylogeny construction and in species identification.

Drought tolerance in tobacco

Abstract: Drought tolerance in tobacco Kjell-Ove Holmstrom;Einar Mantyla;Bjorn Welin;Abul Mandal;Tapio E. Palva;Outi E. Tunnela;John Londesborough; Nature

Sex ratio adjustment in relation to paternal attractiveness in a wild bird population.

Abstract: When the relative fitness of sons and daughters differs, sex-allocation theory predicts that it would be adaptive for individuals to adjust their investment in different sexes of offspring. Sex ratio adjustment by females in response to the sexual attractiveness of their mate would be an example of this. In vertebrates the existence of this form of sex ratio adjustment is controversial and may be confounded with sex-biased mortality, particularly in sexually size-dimorphic species. Here we use PCR amplification of a conserved W-chromosome-linked gene to show that the sex ratio within broods of a natural population of sexually size-monomorphic collared flycatchers Ficedula albicollis is related to the size of their father's forehead patch, a heritable secondary sexual character implicated in female choice. Experimental manipulations of paternal investment, which influence the size of his character in future breeding attempts, result in corresponding changes in the sex ratio of offspring born to males in those breeding attempts. In contrast, manipulations of maternal investment have no effect on future sex ratios, and there is no relationship between variables predicting the reproductive value of the brood and nestling sex ratio. Analysis of recruitment of offspring reveals similar patterns of sex ratio bias. The results suggest that female collared flycatchers be able to adjust the sex ratio of eggs ovulated in response to the phenotype of their mate. This finding is most consistent with "genetic quality" models of sexual selection.

Clostridium ultunense sp. nov., a Mesophilic Bacterium Oxidizing Acetate in Syntrophic Association with a Hydrogenotrophic Methanogenic Bacterium

Abstract: A syntrophic acetate-oxidizing bacterium, strain BST (T = type strain), was isolated from a previously described mesophilic triculture that was able to syntrophically oxidize acetate and form methane in stoichiometric amounts. Strain BST was isolated with substrates typically utilized by homoacetogenic bacteria. Strain BST was a spore-forming, gram-positive, rod-shaped organism which utilized formate, glucose, ethylene glycol, cysteine, betaine, and pyruvate. Acetate and sometimes formate were the main fermentation products. Small amounts of alanine were also produced from glucose, betaine, and cysteine. Strain BST grew optimally at 37°C and pH 7. The G+C content of the DNA of strain BST was 32 mol%. A 16S rRNA sequence analysis revealed that strain BST was a member of a new species of the genus Clostridium. We propose the name Clostridium ultunense for this organism; strain BS is the type strain of C. ultunense.

Uptake of manganese and cadmium from the nasal mucosa into the central nervous system via olfactory pathways in rats.

Abstract: Uptake of manganese and cadmium from the nasal mucosa into the central nervous system via olfactory pathways in rats

Prevalence of Plasmodiophora brassicae in a spring oilseed rape growing area in central Sweden and factors influencing soil infestation levels

Abstract: During 1986–87 the presence of clubroot in soils sampled from 190 fields was assessed using a bioassay method, based on baiting the soils with Brassica campestris spp. pekinesis cv. Granaat. Clubroot was detected in 148 (72%) of the fields investigated and, on average, 49.2% of the plants were infected according to the bioassay. Subsequent testing of fields in 1990 and 1992 (54 and 81 fields, respectively) where no further Brassica crops had been grown indicated a significant decrease in the degree of infestation to 7.1% in 1992. Clay soils showed, on average, the highest degree of infestation, and high infestation was recorded for a wide range of pH values (5.2–6.6). The highest degree of infestation was recorded on fields where oilseeds were grown five times during the period 1965–85. The results presented show that, in a field with 100% infestation, the level of infestation declined to below the detection level after a period of 17.3 years. The half-life of the spore inoculum was determined to be 3.6 years. During the sensitivity testing of different Brassica species and cultivars, it was found that Chinese cabbage showed a low percentage of infestation in two soils, whilst some oilseed rape and spring oilseed turnip rape cultivars showed high degrees of infestation in these soils.

15N abundance of surface soils, roots and mycorrhizas in profiles of European forest soils.

Abstract: 15N natural abundances of soil total N, roots and mycorrhizas were studied in surface soil profiles in coniferous and broadleaved forests along a transect from central to northern Europe. Under conditions of N limitation in Sweden, there was an increase in δ15N of soil total N of up to 9% from the uppermost horizon of the organic mor layer down to the upper 0-5 cm of the mineral soil. The δ15N of roots was only slightly lower than that of soil total N in the upper organic horizon, but further down roots were up to 5% depleted under such conditions. In experimentally N-enriched forest in Sweden, i.e. in plots which have received an average of c. 100 kg N ha-1 year-1 for 20 years and which retain less than 50% of this added N in the stand and the soil down to 20 cm depth, and in some forests in central Europe, the increase in δ15N with depth in soil total N was smaller. An increase in δ15N of the surface soil was even observed on experimentally N-enriched plots, although other data suggest that the N fertilizer added was depleted in15N. In such cases roots could be enriched in15N relative to soil total N, suggesting that labelling of the surface soil is via the pathway: - available pools of N-plant N-litter N. Under N-limiting conditions roots of different species sampled from the same soil horizon showed similar δ15N. By contrast, in experimentally N-enriched forest δ15N of roots increased in the sequence: ericaceous dwarf shrubs

Neospora species infection in a herd of dairy cattle.

Abstract: OBJECTIVE: To investigate the route of transmission of Neospora sp in a herd of dairy cattle in which sporadic abortions had been observed since the establishment of the farm in 1980. DESIGN: Serum samples were screened for antibodies to Neospora sp, and records from an artificial insemination program were analyzed. ANIMALS: 58 female cattle. PROCEDURE: An ELISA was used to screen serum samples of antibodies to Neospora sp. Fertility, calf mortality, and relationships between specific cattle were investigated. Statistical analysis was performed on the fertility data. RESULTS: Antibodies were detected in 17 of 58 (29%) tested cattle. All seropositive cattle were descendants of 2 cows purchased in 1980. Cattle that were descendants of those 2 cows were compared with their herdmates, but significant differences were not detected in the number of inseminations per confirmed pregnancy or in the number of cattle that required more than 1 insemination/ pregnancy. Since 1980, there were 323 confirmed pregnancies in the herd, and calf mortality (prenatal and perinatal mortality) was 24 of 323 (7%). CLINICAL IMPLICATIONS: Congenital transmission of Neospora organisms together with the apparent lack of horizontal transmission observed in the herd reported here indicated that Neospora sp has the ability to be transmitted from dam to offspring for several generations. This mode of transmission would explain the maintenance of infection in a population of cattle despite the lack of a definitive host for the parasite.

Pigs with the dominant white coat color phenotype carry a duplication of the KIT gene encoding the mast/stem cell growth factor receptor.

Abstract: Comparative mapping data suggested that the dominant white coat color in pigs may be due to a mutation in KIT which encodes the mast/stem cell growth factor receptor. We report here that dominant white pigs lack melanocytes in the skin, as would be anticipated for a KIT mutation. We found a complete association between the dominant white mutation and a duplication of the KIT gene, or part of it, in samples of unrelated pigs representing six different breeds. The duplication was revealed by single strand conformation polymorphism (SSCP) analysis and subsequent sequence analysis howing that white pigs transmitted two nonallelic KIT sequences. Quantitative Southern blot and quantitative PCR analysis, as well as fluorescence in situ hybridization (FISH) analysis, confirmed the presence of a gene duplication in white pigs. FISH analyses showed that KIT and the very closely linked gene encoding the platelet-derived growth factor receptor (PDG-FRA) are both located on the short arm of Chromosome (Chr) 8 at band 8pl2. The result revealed an extremely low rate of recombination in the centromeric region of this chromosome, since the closely linked (0.5 cM) serum albumin (ALB) locus has previously been in situ mapped to the long arm (8ql2). Pig Chr 8 shares extensive conserved synteny with human Chr 4, but the gene order is rearranged.

Root sampling methods-applications and limitations of the minirhizotron technique

Abstract: Applications and limitations of the minirhizotron technique (non-destructive) in relation to two frequently used destructive methods (soil coreing and ingrowth cores) is discussed. Sequential coreing provides data on standing crop but it is difficult to obtain data on root biomass production. Ingrowth cores can provide a quick estimate of relative fine-root growth when root growth is rapid. One limitation of the ingrowth core is that no information on the time of ingrowth and mortality is obtained.

Mycorrhizal diversity in arctic and alpine tundra: an open question

Abstract: SUMMARY Current knowledge of mycorrhizal diversity in arctic and alpine tundra is based mainly on static surveys of mycorrhizal associations of plant taxa and fruiting patterns of selected ectomycorrhizal fungal species in specific habitats. Within these limitations, it appears that: (1) non-mycorrhizal plants are widespread and predominate in certain plant communities; (2) typical arbuscular mycorrhizal associations are ubiquitous in low arctic and alpine areas but that the level of root colonization is highly variable; (3) root colonization by dark septate fungi is a common event but that their ecological significance is still unknown; (4) a large number of ectomycorrhizal fungal species are present as symbionts of a relatively few widely distributed shrubs and herbaceous plant taxa; (5) ericaceous plants with erieoid mycorrhizas dominate large arctic and alpine areas covered by heath communities. Physical environmental features strongly limit and shape species diversity in arctic and alpine tundra. Cold-dominated environments provide extreme conditions for the establishment and functioning of mycorrhizal associations. Therefore, such systems are simple models to address the ecology and evolution of mycorrhizal symbioses. Molecular methods to identify mycorrhizal fungi on plant roots will resolve questions related to the structure and dynamics of communities of mycorrhizal fungi in arctic and alpine tundra.

Disruption of an overlapping E-box/ABRE motif abolished high transcription of the napA storage-protein promoter in transgenic Brassica napus seeds

Abstract: The storage protein napin is one of the major protein components of Brassica napus L. (oilseed rape) seeds. To investigate the transcriptional regulation of the napin promoter, different constructs of the napin gene napA promoter were fused to the Escherichia coli uidA gene and transformed into B. napus. A-152-bp promoter construct directed a strong expression of the marker gene in mature seeds. The 5' deletion of an additional 8 completely abolished this activity. This deletion disrupted sequence motifs that are similar to an E-box, (CA decreases NNTG) and an ABRE (CGCCA decreases CGTGTCC) element (identify is indicated by bold face). Further, internal deletion of a segment corresponding to -133 to -121 caused an eightfold reduction in the activity of the -152 construct. This region contains an element, CAAACAC, conserved in many storage-protein gene promoters. These results imply that the E-box/ABRE-like sequence is a major motif of the napA promoter and suggest that the CAAACAC sequence is important for high activity of the napA promoter. Similar results have been obtained by analysing some of the constructs in transgenic tobacco, suggesting that many of the cis-elements in the napA promoter are conserved, at least in dicotyledonous species.

Comparative analysis of the cattle and human genomes: detection of ZOO-FISH and gene mapping-based chromosomal homologies

Abstract: Comparative chromosome painting with individual human chromosome-specific libraries (CSLs) on cattle metaphase chromosomes delineated 46 homologous chromosomal segments between the two species. Continuous arrangement of these segments on individual cattle chromosomes demonstrates a nearly complete coverage of the bovine karyotype and shows physical boundaries of bovine chromosomal segments homologous to individual human chromosomes. Alignment of the available comparative gene mapping data with the homologous segments strongly supports the detected gross homologies between the karyotypes of the two species. In addition to cattle, four human CSLs were hybridized to sheep metaphase chromosomes also, to further verify the known karyotype homology within the Bovidae. Besides its application to karyotype evolution research, the comparative knowledge provides for rapid expansion of the much needed Type I locus-based bovine gene map.

Functional dissection of a napin gene promoter: identification of promoter elements required for embryo and endosperm-specific transcription

Abstract: The promoter region (−309 to +44) of the Brassica napus storage protein gene napA was studied in transgenic tobacco by successive 5′ as well as internal deletions fused to the reporter gene GUS (β-glucuronidase). The expression in the two main tissues of the seed, the endosperm and the embryo, was shown to be differentially regulated. This tissue-specific regulation within the seed was found to affect the developmental expression during seed development. The region between −309 to −152, which has a large effect on quantitative expression, was shown to harbour four elements regulating embryo and one regulating endosperm expression. This region also displayed enhancer activity. Deletion of eight bp from position −152 to position −144 totally abolished the activity of the napA promoter. This deletion disrupted a cis element with similarity to an ABA-responsive element (ABRE) overlapping with an E-box, demonstrating its crucial importance for quantitative expression. An internal deletion of the region −133 to −120, resulted in increased activity in both leaves and endosperm and a decreased activity in the embryo. Within this region, a cis element similar to the (CA)n element, found in other storage protein promoters, was identified. This suggest that the (CA)n element is important for conferring seed specificity by serving both as an activator and a repressor element.

Dominance in demand‐feeding behaviour in Arctic charr and rainbow trout: the effect of stocking density

Abstract: The effects of stocking density on the demand feeding behaviour of Arctic charr Salvelinus alpinus and rainbow trout Oncorhynchus mykiss were evaluated using demand feeders in combination with a monitoring system based on automatic passive integrated transponders. The proportion of total bites accounted for by top-ranked charr and trout decreased from 87 to 15% and from 66 to 15%, respectively, when moving from the lowest to the highest densities, indicating that the ability of the highest-ranked fish to monopolize the demand feeders was reduced at high densities. However, when the individuals were grouped into quartiles, based on their individual rank, both charr and trout ranked within the upper quartile accounted for the majority of bites independent of stocking density (87 and 72% of the total, respectively). Instead of there being a single dominant individual, as was the case under low density conditions, a small group of individuals dominated the actuation of the trigger at high densities. The two species responded differently to crowding, with the total daily bite activity of charr increasing linearly with increasing density, whereas the corresponding relationship was quadratic for rainbow trout, with a peak value at 24 to 36kg m−3.

Dextran sulfate sodium (DSS) induced experimental colitis in immunodeficient mice: Effects in CD4+-cell depleted, athymic and NK-cell depleted SCID mice

Abstract: Administration of dextran sulfate to mice, given in the drinking water results in acute or subacute colonic inflammation, depending on the administration protocol. This colonic inflammation exhibits ulceration, healing and repair, and a therapeutic response that makes it valuable for the study of mechanisms that could act in the pathogenesis of human ulcerative colitis, a disease thought to have an immunologically dependent pathogenesis. To investigate if immunological mechanisms were involved in the induction of colonic inflammation in this model, mice with different degrees of immunodeficiency were used. It was shown that dextran sulfate induced colitis could be induced in Balb/c mice depleted of CD4+ helper T cells by treatment with monoclonal antibodies preceded by adult thymectomy. The depletion of CD4+ was verified by flow cytometric analysis. Furthermore, the colonic inflammation could equally be induced in athymic CD-1 nu/nu mice lacking thymusderived T cells, in T and B-cell deficient SCID mice, and also in SCID mice depleted of NK cells by treatment with anti-asialo GM1 antibodies. The NK-cell depletion was verified by measuring spleen NK-cell activity. The resulting colonic inflammation in all these types of deficient mice was qualitatively comparable, as shown by clinical and histological appearance. These results indicate that the presence of functional T, B and NK cells is not crucial for the induction of dextran sulfate colitis in mice.