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Showing papers by "United States Environmental Protection Agency published in 2005"


Journal ArticleDOI
TL;DR: A critical reassessment of the quality and the robustness of these models across tropical forest types, using a large dataset of 2,410 trees ≥ 5 cm diameter, directly harvested in 27 study sites across the tropics, is provided.
Abstract: Tropical forests hold large stores of carbon, yet uncertainty remains regarding their quantitative contri- bution to the global carbon cycle. One approach to quantifying carbon biomass stores consists in inferring changes from long-term forest inventory plots. Regres- sion models are used to convert inventory data into an estimate of aboveground biomass (AGB). We provide a critical reassessment of the quality and the robustness of these models across tropical forest types, using a large dataset of 2,410 trees ‡ 5 cm diameter, directly harvested in 27 study sites across the tropics. Proportional rela- tionships between aboveground biomass and the prod- uct of wood density, trunk cross-sectional area, and total height are constructed. We also develop a regres- sion model involving wood density and stem diameter only. Our models were tested for secondary and old- growth forests, for dry, moist and wet forests, for low- land and montane forests, and for mangrove forests. The most important predictors of AGB of a tree were, in decreasing order of importance, its trunk diameter, wood specific gravity, total height, and forest type (dry, moist, or wet). Overestimates prevailed, giving a bias of 0.5-6.5% when errors were averaged across all stands. Our regression models can be used reliably to predict aboveground tree biomass across a broad range of tropical forests. Because they are based on an unprece- dented dataset, these models should improve the quality

2,786 citations


Journal ArticleDOI
TL;DR: The working group report presents a broad data gathering strategy applicable to this early stage in the development of a risk assessment process for nanomaterials, and there is a strong likelihood that biological activity of nanoparticles will depend on physicochemical parameters not routinely considered in toxicity screening studies.
Abstract: The rapid proliferation of many different engineered nanomaterials (defined as materials designed and produced to have structural features with at least one dimension of 100 nanometers or less) presents a dilemma to regulators regarding hazard identification. The International Life Sciences Institute Research Foundation/Risk Science Institute convened an expert working group to develop a screening strategy for the hazard identification of engineered nanomaterials. The working group report presents the elements of a screening strategy rather than a detailed testing protocol. Based on an evaluation of the limited data currently available, the report presents a broad data gathering strategy applicable to this early stage in the development of a risk assessment process for

2,015 citations


Journal ArticleDOI
TL;DR: In this paper, an overview of the use of nanomaterials in water purification can be found, highlighting recent advances on the development of novel nanoscale materials and processes for treatment of surface water, groundwater and industrial wastewater contaminated by toxic metal ions, radionuclides, organic and inorganic solutes, bacteria and viruses.
Abstract: Advances in nanoscale science and engineering suggest that many of the current problems involving water quality could be resolved or greatly ameliorated using nanosorbents, nanocatalysts, bioactive nanoparticles, nanostructured catalytic membranes and nanoparticle enhanced filtration among other products and processes resulting from the development of nanotechnology. Innovations in the development of novel technologies to desalinate water are among the most exciting and promising. Additionally, nanotechnology-derived products that reduce the concentrations of toxic compounds to sub-ppb levels can assist in the attainment of water quality standards and health advisories. This article gives an overview of the use of nanomaterials in water purification. We highlight recent advances on the development of novel nanoscale materials and processes for treatment of surface water, groundwater and industrial wastewater contaminated by toxic metal ions, radionuclides, organic and inorganic solutes, bacteria and viruses. In addition, we discuss some challenges associated with the development of cost effective and environmentally acceptable functional nanomaterials for water purification.

1,099 citations


Journal ArticleDOI
TL;DR: An option is a priori to combine sources with similar signatures so the number of sources is small enough to provide a unique solution, and contributions from functionally related groups of sources can be summed a posteriori, producing a range of solutions for the aggregate source that may be considerably narrower.
Abstract: Stable isotope mixing models are often used to quantify source contributions to a mixture. Examples include pollution source identification; trophic web studies; analysis of water sources for soils, plants; or water bodies, and many others. A common problem is having too many sources to allow a unique solution. We discuss two alternative procedures for addressing this problem. One option is a priori to combine sources with similar signatures so the number of sources is small enough to provide a unique solution. Aggregation should be considered only when isotopic signatures of clustered sources are not significantly different, and sources are related so the combined source group has some functional significance. For example, in a food web analysis, lumping several species within a trophic guild allows more interpretable results than lumping disparate food sources, even if they have similar isotopic signatures. One result of combining mixing model sources is increased uncertainty of the combined end-member isotopic signatures and consequently the source contribution estimates; this effect can be quantified using the IsoError model ( http://www.epa.gov/wed/pages/models/isotopes/isoerror1_04.htm ). As an alternative to lumping sources before a mixing analysis, the IsoSource mixing model ( http://www.epa.gov/wed/pages/models/isosource/isosource.htm ) can be used to find all feasible solutions of source contributions consistent with isotopic mass balance. While ranges of feasible contributions for each individual source can often be quite broad, contributions from functionally related groups of sources can be summed a posteriori, producing a range of solutions for the aggregate source that may be considerably narrower. A paleohuman dietary analysis example illustrates this method, which involves a terrestrial meat food source, a combination of three terrestrial plant foods, and a combination of three marine foods. In this case, a posteriori aggregation of sources allowed strong conclusions about temporal shifts in marine versus terrestrial diets that would not have otherwise been discerned.

775 citations


Journal ArticleDOI
TL;DR: In this article, the authors show that despite the variability in PM characteristics, which are believed to influence human health risks, the observed relative health risk estimates per unit PM mass falls within a narrow range of values, and no single chemical species appears to dominate health effects; rather the effects appear to be due to a combination of species.
Abstract: Results of recent research show that particulate matter (PM) composition and size vary widely with both space and time. Despite the variability in PM characteristics, which are believed to influence human health risks, the observed relative health risk estimates per unit PM mass falls within a narrow range of values. Furthermore, no single chemical species appears to dominate health effects; rather the effects appear to be due to a combination of species. Non-PM factors such as socioeconomic status and lifestyle are also believed to affect the health risk, although accounting for these confounding factors is challenging. Airborne PM is also responsible for a number of effects aside from human health, such as alterations in visibility and climate. Because the PM problem is associated with a range of societal issues such as energy production and economic development, making progress on reducing the effects of PM will require integrated strategies that bring together scientists and decision makers from diffe...

725 citations


Journal ArticleDOI
TL;DR: In this paper, the authors present a literature review on different types of impermeable surface and their relative impacts on landscape hydrology, and describe the manner in which these surfaces are assessed for their putative impacts.
Abstract: Increased impervious surface area is a consequence of urbanization, with correspondent and significant effects on the hydrologic cycle. It is intuitive that an increased proportion of impervious surface brings with it shorter lag times between onset of precipitation and subsequently higher runoff peaks and total volume of runoff in receiving waters. Yet, documentation on quantitative relationships between the extent and type of impervious area and these hydrologic factors remains dispersed across several disciplines. We present a literature review on this subject to better understand and synthesize distinctions among different types of impermeable surface and their relative impacts, and describe the manner in which these surfaces are assessed for their putative impacts on landscape hydrology.

696 citations


Journal ArticleDOI
TL;DR: This research suggests that selected chemicals are useful as tracers of human wastewater discharge by determining the persistence of a chemically diverse suite of emerging contaminants in streams.
Abstract: The quality of drinking and recreational water is currently (2005) determined using indicator bacteria. However, the culture tests used to analyze forthese bacteria require a long time to complete and do not discriminate between human and animal fecal material sources. One complementary approach is to use chemicals found in human wastewater, which would have the advantages of (1) potentially shorter analysis times than the bacterial culture tests and (2) being selected for human-source specificity. At 10 locations, water samples were collected upstream and at two successive points downstream from a wastewaster treatment plant (WWTP); a treated effluent sample was also collected at each WWTP. This sampling plan was used to determine the persistence of a chemically diverse suite of emerging contaminants in streams. Samples were also collected at two reference locations assumed to have minimal human impacts. Of the 110 chemical analytes investigated in this project, 78 were detected at least once. The number of compounds in a given sample ranged from 3 at a reference location to 50 in a WWTP effluent sample. The total analyte load at each location varied from 0.018 microg/L at the reference location to 97.7 microg/L in a separate WWTP effluent sample. Although most of the compound concentrations were in the range of 0.01-1.0 microg/L, in some samples, individual concentrations were in the range of 5-38 microg/L. The concentrations of the majority of the chemicals present in the samples generally followed the expected trend: they were either nonexistent or at trace levels in the upstream samples, had their maximum concentrations in the WWTP effluent samples, and then declined in the two downstream samples. This research suggests that selected chemicals are useful as tracers of human wastewater discharge.

670 citations


Journal ArticleDOI
TL;DR: Research is needed to determine mechanisms for trace element retention of soil-residual systems, determine the effect of residuals on ecological receptors and the ability of residual’s to reduce ecotoxicity in metal-contaminated soil, and predict the long-term bioavailability of trace elements in soil- Residual Systems.
Abstract: Trace element solubility and availability in land-applied residuals is governed by fundamental chemical reactions between metal constituents, soil, and residual components. Iron, aluminum, and manganese oxides; organic matter; and phosphates, carbonates, and sulfides are important sinks for trace elements in soil-residual systems. The pH of the soil-residual system is often the most important chemical property governing trace element sorption, precipitation, solubility, and availability. Trace element phytoavailability in residual-treated soils is often estimated using soil extraction methods. However, spectroscopic studies show that sequential extraction methods may not be accurate in perturbed soil-residual systems. Plant bioassay is the best method to measure the effect of residuals on phytoavailability. Key concepts used to describe phytoavailability are (i) the salt effect, (ii) the plateau effect, and (iii) the soil-plant barrier. Metal availability in soil from metal-salt addition is greater than availability in soil from addition of metal-containing residuals. Plant metal content displays plateaus at high residual loadings corresponding to the residual's metal concentration and sorption capacity. The soil-plant barrier limits transmission of many trace elements through the food chain, although Cd (an important human health concern) can bypass the soil-plant barrier. Results from many studies that support these key concepts provide a basis of our understanding of the relationship between trace element chemistry and phytoavailability in residual-treated soils. Research is needed to (i) determine mechanisms for trace element retention of soil-residual systems, (ii) determine the effect of residuals on ecological receptors and the ability of residuals to reduce ecotoxicity in metal-contaminated soil, and (iii) predict the long-term bioavailability of trace elements in soil-residual systems.

665 citations


Journal ArticleDOI
TL;DR: It is concluded that measurements of MDA and isoprostanes in plasma and urine as well as 8-OHdG in urine are potential candidates for general biomarkers of oxidative stress.

664 citations


Journal ArticleDOI
TL;DR: In this article, the status of an emerging membrane-based technology, called pervaporation, for this application is reviewed and several issues and research priorities which will impact the ability of pervAPoration to be competitive for biofuel recovery from fermentation systems are identified and discussed.
Abstract: Although several separation technologies are technically capable of removing volatile products from fermentation broths, distillation remains the dominant technology. This is especially true for the recovery of biofuels such as ethanol. In this paper, the status of an emerging membrane-based technology, called pervaporation, for this application is reviewed. Several issues and research priorities which will impact the ability of pervaporation to be competitive for biofuel recovery from fermentation systems are identified and discussed. They include: increased energy efficiency; reduction of capital cost for pervaporation systems; longer term trials with actual fermentation broths; optimized integration of pervaporation with fermentor; synergy of performing both alcohol recovery and solvent dehydration by pervaporation with dephlegmation fractional condensation technology; and updated economic analyses of pervaporation at various biofuel production scales. Pervaporation is currently viable for biofuel recovery in a number of situations, but more widespread application will be possible when progress has been made on these issues. Published in 2005 for SCI by John Wiley & Sons, Ltd.

655 citations


Journal ArticleDOI
TL;DR: The complete set of primers was developed with an emphasis on discrimination between plant and fungal sequences and should be particularly useful for studies of fungi where samples also contain high levels of background plant DNA, such as verifying ectomycorrhizal morphotypes or characterizing phylosphere communities.
Abstract: The Internal Transcribed Spacer (ITS) regions of fungal ribosomal DNA (rDNA) are highly variable sequences of great importance in distinguishing fungal species by PCR analysis. Previously published PCR primers available for amplifying these sequences from environmental samples provide varying degrees of success at discriminating against plant DNA while maintaining a broad range of compatibility. Typically, it has been necessary to use multiple primer sets to accommodate the range of fungi under study, potentially creating artificial distinctions for fungal sequences that amplify with more than one primer set. Numerous sequences for PCR primers were tested to develop PCR assays with a wide range of fungal compatibility and high discrimination from plant DNA. A nested set of 4 primers was developed that reflected these criteria and performed well amplifying ITS regions of fungal rDNA. Primers in the 5.8S sequence were also developed that would permit separate amplifications of ITS1 and ITS2. A range of basidiomycete fruiting bodies and ascomycete cultures were analyzed with the nested set of primers and Restriction Fragment Length Polymorphism (RFLP) fingerprinting to demonstrate the specificity of the assay. Single ectomycorrhizal root tips were similarly analyzed. These primers have also been successfully applied to Quantitative PCR (QPCR), Length Heterogeneity PCR (LH-PCR) and Terminal Restriction Fragment Length Polymorphism (T-RFLP) analyses of fungi. A set of wide-range plant-specific primers were developed at positions corresponding to one pair of the fungal primers. These were used to verify that the host plant DNA was not being amplified with the fungal primers. These plant primers have been successfully applied to PCR-RFLP analyses of forest plant tissues from above- and below-ground samples and work well at distinguishing a selection of plants to the species level. The complete set of primers was developed with an emphasis on discrimination between plant and fungal sequences and should be particularly useful for studies of fungi where samples also contain high levels of background plant DNA, such as verifying ectomycorrhizal morphotypes or characterizing phylosphere communities.

Journal ArticleDOI
TL;DR: Evidence from the current literature is presented that addresses either of two questions: 1) do EDCs in the aquatic environment have the potential to impact the reproductive health and survival of various fish species, and 2) are EDCsInThe aquatic environment actually impacting the reproductivehealth and sustainability of indigenous populations of fish?

Journal ArticleDOI
TL;DR: The formulation of the American Meteorological Society (AMS) and U.S. Environmental Protection Agency (EPA) Regulatory Model (AERMOD) Improvement Committee's applied air dispersion model is described in this paper.
Abstract: The formulation of the American Meteorological Society (AMS) and U.S. Environmental Protection Agency (EPA) Regulatory Model (AERMOD) Improvement Committee’s applied air dispersion model is described. This is the first of two articles describing the model and its performance. Part I includes AERMOD’s characterization of the boundary layer with computation of the Monin–Obukhov length, surface friction velocity, surface roughness length, sensible heat flux, convective scaling velocity, and both the shear- and convection-driven mixing heights. These parameters are used in conjunction with meteorological measurements to characterize the vertical structure of the wind, temperature, and turbulence. AERMOD’s method for considering both the vertical inhomogeneity of the meteorological characteristics and the influence of terrain are explained. The model’s concentration estimates are based on a steady-state plume approach with significant improvements over commonly applied regulatory dispersion models. Co...

Journal ArticleDOI
TL;DR: The Great Barrier Reef Marine Park, an area almost the size of Japan, has a new network of no-take areas that significantly improves the protection of biodiversity as discussed by the authors, and more than 33% of the GBR Marine Park is now in no take areas (previously 4.5%).
Abstract: The Great Barrier Reef Marine Park, an area almost the size of Japan, has a new network of no-take areas that significantly improves the protection of biodiversity. The new marine park zoning implements, in a quantitative manner, many of the theoretical design principles discussed in the literature. For example, the new network of no-take areas has at least 20% protection per “bioregion,” minimum levels of protection for all known habitats and special or unique features, and minimum sizes for no-take areas of at least 10 or 20 km across at the smallest diameter. Overall, more than 33% of the Great Barrier Reef Marine Park is now in no-take areas (previously 4.5%). The steps taken leading to this outcome were to clarify to the interested public why the existing level of protection was inadequate; detail the conservation objectives of establishing new no-take areas; work with relevant and independent experts to define, and contribute to, the best scientific process to deliver on the objectives; describe the biodiversity (e.g., map bioregions); define operational principles needed to achieve the objectives; invite community input on all of the above; gather and layer the data gathered in round-table discussions; report the degree of achievement of principles for various options of no-take areas; and determine how to address negative impacts. Some of the key success factors in this case have global relevance and include focusing initial communication on the problem to be addressed; applying the precautionary principle; using independent experts; facilitating input to decision making; conducting extensive and participatory consultation; having an existing marine park that encompassed much of the ecosystem; having legislative power under federal law; developing high-level support; ensuring agency priority and ownership; and being able to address the issue of displaced fishers.

Journal ArticleDOI
TL;DR: A definition and set of CBPR principles are provided to describe the rationale for and major benefits of using this approach, to draw on the experiences of six of the Children’s Centers in using CBPR, and to provide lessons learned and recommendations for how to successfully establish and maintain CBPR partnerships.
Abstract: Over the past several decades there has been growing evidence of the increase in incidence rates, morbidity, and mortality for a number of health problems experienced by children. The causation and aggravation of these problems are complex and multifactorial. The burden of these health problems and environmental exposures is borne disproportionately by children from low-income communities and communities of color. Researchers and funding institutions have called for increased attention to the complex issues that affect the health of children living in marginalized communities--and communities more broadly--and have suggested greater community involvement in processes that shape research and intervention approaches, for example, through community-based participatory research (CBPR) partnerships among academic, health services, public health, and community-based organizations. Centers for Children's Environmental Health and Disease Prevention Research (Children's Centers) funded by the National Institute of Environmental Health Sciences and U.S. Environmental Protection Agency were required to include a CBPR project. The purpose of this article is to provide a definition and set of CBPR principles, to describe the rationale for and major benefits of using this approach, to draw on the experiences of six of the Children's Centers in using CBPR, and to provide lessons learned and recommendations for how to successfully establish and maintain CBPR partnerships aimed at enhancing our understanding and addressing the multiple determinants of children's health.

Journal ArticleDOI
TL;DR: Cell densities of the fecal pollution indicator genus, Enterococcus, were determined by a rapid quantitative polymerase chain reaction (QPCR) analysis method in 100 ml water samples collected from recreational beaches on Lake Michigan and Lake Erie during the summer of 2003.

Journal ArticleDOI
TL;DR: In this paper, the physical and chemical characterization of PM 25 emissions from simulated agricultural fires (AFs) of surface residuals of two major grain crops, rice ( Oryza sativa ) and wheat ( Triticum aestivum L) is presented.

Journal ArticleDOI
TL;DR: Gutowski et al. as mentioned in this paper found evidence that US firms may be at a disadvantage due in part to a lack of coherent national goals in such areas as waste management, global warming, energy efficiency and product take back.

Journal ArticleDOI
TL;DR: The first field-scale demonstration conducted to evaluate the performance of nanoscale emulsified zero-valent iron injected into the saturated zone to enhance in situ dehalogenation of dense, nonaqueous phase liquids (DNAPLs) containing trichloroethene (TCE) showed significant reductions in TCE soil concentrations and groundwater concentrations.
Abstract: This paper describes the results of the first field-scale demonstration conducted to evaluate the performance of nanoscale emulsified zero-valent iron (EZVI) injected into the saturated zone to enhance in situ dehalogenation of dense, nonaqueous phase liquids (DNAPLs) containing trichloroethene (TCE). EZVI is an innovative and emerging remediation technology. EZVI is a surfactant-stabilized, biodegradable emulsion that forms emulsion droplets consisting of an oil-liquid membrane surrounding zero-valent iron (ZVI) particles in water. EZVI was injected over a five day period into eight wells in a demonstration test area within a larger DNAPL source area at NASA's Launch Complex 34 (LC34) using a pressure pulse injection method. Soil and groundwater samples were collected before and after treatment and analyzed for volatile organic compounds (VOCs) to evaluate the changes in VOC mass, concentration and mass flux. Significant reductions in TCE soil concentrations (>80%) were observed at four of the six soil sampling locations within 90 days of EZVI injection. Somewhat lower reductions were observed at the other two soil sampling locations where visual observations suggest that most of the EZVI migrated up above the target treatment depth. Significant reductions in TCE groundwater concentrations (57 to 100%) were observed at all depths targeted with EZVI. Groundwater samples from the treatment area also showed significant increases in the concentrations of cis-1,2-dichloroethene (cDCE), vinyl chloride (VC) and ethene. The decrease in concentrations of TCE in soil and groundwater samples following treatment with EZVI is believed to be due to abiotic degradation associated with the ZVI as well as biodegradation enhanced by the presence of the oil and surfactant in the EZVI emulsion.

Journal ArticleDOI
TL;DR: E epidemiologic evidence for an association between environmental agents’ exposure and neurodegenerative diseases is not conclusive, but there are indications that there may be causal links, and the need for more research is obvious.
Abstract: The population of the United States is aging, and an ever-increasing number of Americans are afflicted with neurodegenerative diseases. Because the pathogenesis of many of these diseases remains unknown, we must consider that environmental factors may play a causal role. This review provides an overview of the epidemiologic evidence for environmental etiologies for neurodegenerative diseases such as Alzheimer disease, Parkinson disease, parkinsonian syndromes (multiple system atrophy and progressive supranuclear palsy), and amyotrophic lateral sclerosis. Epidemiologic evidence for an association between environmental agents' exposure and neurodegenerative diseases is not conclusive. However, there are indications that there may be causal links, and the need for more research is obvious.

Journal ArticleDOI
TL;DR: In this article, an isoprene/NO X /air mixture was irradiated in a flow reactor smog chamber in both the absence and presence of SO 2 to measure the SOA yield and to establish whether the two 2-methyl tetrols and 2methyl glyceric acid are present in isoprane SOA and could serve as SOA indicator compounds.

Journal ArticleDOI
TL;DR: Results from the ICP Waters programme clearly show widespread improvement in surface water acid-base chemistry, in response to emissions controls programs and decreasing acidic deposition, which may lead to biological recovery in the future.

Journal ArticleDOI
TL;DR: It is shown that these dyes contributed to the mutagenic activity found in the Cristais River environmental samples analyzed and are indirectly affecting the quality of the related drinking water.

01 Jan 2005
TL;DR: In this paper, the authors modeled the potential changes in the extent of intertidal foraging habitat for shorebirds at five sites in the United States that currently support internationally important numbers of migrating and wintering birds.
Abstract: Global warming is expected to result in an acceleration in current rates of sea level rise, inundating many low-lying coastal and intertidal areas. This could have important implications for organisms that depend on these sites, including shorebirds that rely on them for feeding habitat during their migrations and in winter. We modeled the potential changes in the extent of intertidal foraging habitat for shorebirds at five sites in the United States that currently support internationally important numbers of migrating and wintering birds. Even assuming a conservative global warming scenario of 2°C within the next century (the most recent projections range between 1.4°C and 5.8°C), we project major intertidal habitat loss at four of the sites (Willapa Bay, Humboldt Bay, San Francisco Bay, and Delaware Bay). Projected losses range between 20% and 70% of current intertidal habitat. Such losses might jeopardize the ability of these sites to continue to support their current shorebird numbers. The mo...

Journal ArticleDOI
TL;DR: It is hypothesized that environmental exposures in early life may be of particular etiologic importance and evidence for the early environmental origins of neurodegeneration is reviewed, to discover new environmental causes of AD and PD.
Abstract: Parkinson disease (PD) and Alzheimer disease (AD), the two most common neurodegenerative disorders in American adults, are of purely genetic origin in a minority of cases and appear in most instances to arise through interactions among genetic and environmental factors In this article we hypothesize that environmental exposures in early life may be of particular etiologic importance and review evidence for the early environmental origins of neurodegeneration For PD the first recognized environmental cause, MPTP (1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine), was identified in epidemiologic studies of drug abusers Chemicals experimentally linked to PD include the insecticide rotenone and the herbicides paraquat and maneb; interaction has been observed between paraquat and maneb In epidemiologic studies, manganese has been linked to parkinsonism In dementia, lead is associated with increased risk in chronically exposed workers Exposures of children in early life to lead, polychlorinated biphenyls, and methylmercury have been followed by persistent decrements in intelligence that may presage dementia To discover new environmental causes of AD and PD, and to characterize relevant gene–environment interactions, we recommend that a large, prospective genetic and epidemiologic study be undertaken that will follow thousands of children from conception (or before) to old age Additional approaches to etiologic discovery include establishing incidence registries for AD and PD, conducting targeted investigations in high-risk populations, and improving testing of the potential neurologic toxicity of chemicals

Journal ArticleDOI
TL;DR: Particle-induced decrease in TLR4 and hyporesponsiveness to LPS may be related to L PS tolerance induced by low levels of LPS, while all size PM induced oxidant stress in NHBE, while fine PM induced the highest levels of HO-1 expression.

Journal ArticleDOI
TL;DR: Examination of host distribution patterns among fecal bacteria in the order Bacteroidales revealed both endemic and cosmopolitan distributions among the eight hosts, with the goal of using endemic sequences as markers for fecal source identification in aquatic environments.
Abstract: The purpose of this study was to examine host distribution patterns among fecal bacteria in the order Bacteroidales, with the goal of using endemic sequences as markers for fecal source identification in aquatic environments. We analyzed Bacteroidales 16S rRNA gene sequences from the feces of eight hosts: human, bovine, pig, horse, dog, cat, gull, and elk. Recovered sequences did not match database sequences, indicating high levels of uncultivated diversity. The analysis revealed both endemic and cosmopolitan distributions among the eight hosts. Ruminant, pig, and horse sequences tended to form host- or host group-specific clusters in a phylogenetic tree, while human, dog, cat, and gull sequences clustered together almost exclusively. Many of the human, dog, cat, and gull sequences fell within a large branch containing cultivated species from the genus Bacteroides. Most of the cultivated Bacteroides species had very close matches with multiple hosts and thus may not be useful targets for fecal source identification. A large branch containing cultivated members of the genus Prevotella included cloned sequences that were not closely related to cultivated Prevotella species. Most ruminant sequences formed clusters separate from the branches containing Bacteroides and Prevotella species. Host-specific sequences were identified for pigs and horses and were used to design PCR primers to identify pig and horse sources of fecal pollution in water. The primers successfully amplified fecal DNAs from their target hosts and did not amplify fecal DNAs from other species. Fecal bacteria endemic to the host species may result from evolution in different types of digestive systems.

Journal ArticleDOI
TL;DR: Differences in Hg exposure among species are primarily correlated with trophic position and availability of MeHg, and those among species exhibiting sexual dimorphism and niche partitioning are of interpretive concern.
Abstract: A large data set of over 4,700 records of avian mercury (Hg) levels in northeastern North America was compiled and evaluated. As Hg emissions remain poorly regulated in the United States and Canada, atmospheric deposition patterns and associated ecological responses continue to elicit interest by landscape managers, conservation biologists, policy makers, and the general public. How avian Hg exposure is interpreted greatly influences decision-making practices. The geographic extent and size of this data set is valuable in understanding the factors that affect the exposure of Hg to birds. Featured are differences found among tissues, major aquatic habitats and geographic areas, between age class and gender, and among species. While Hg concentrations in egg and blood reflect short-term Hg exposure, Hg concentrations in liver and feather provide insight into long-term Hg exposure. Blood is a particularly important matrix for relating site-specific exposure to methylmercury (MeHg). The level of MeHg is generally 5–10x greater in adults compared to nestlings. Age also influences MeHg bioaccumulation, particularly for individuals where MeHg intake exceeds elimination. Gender is of interpretive concern when evaluating Hg exposure for species exhibiting sexual dimorphism and niche partitioning. Based on two indicator species, the belted kingfisher (Ceryle alcyon) and bald eagle (Haliaeetus leucocephalus), we found MeHg availability increased from marine, to estuarine and riverine systems, and was greatest in lake habitats. A large sample of >1,800 blood and egg Hg levels from the common loon (Gavia immer) facilitated a suitable comparison of geographic differences. Although some clusters of highly elevated Hg exposure (i.e., blood levels >3.0 μg/g, ww and egg levels >1.3 μg/g, ww) were associated with hydrological and biogeochemical factors known to increase MeHg production and availability, others were not. Geographic areas without a relationship between Hg exposure and biogeochemical processes were associated with emission or waterborne point sources. Differences in Hg exposure among species are primarily correlated with trophic position and availability of MeHg. Although piscivorous species were repeatedly shown to have some of the highest MeHg levels of the 38 species analyzed, insectivorous birds in both aquatic and terrestrial habitats (such as montane areas) were also found with elevated MeHg levels. A better understanding of the factors confounding interpretation of Hg exposure provides an effective basis for choice of indicator species and tissues according to 12 selected scenarios. This and the national need for spatiotemporal monitoring of MeHg availability require careful consideration of indicator species choice. Only then will local, regional, continental, and even global monitoring efforts be effective.

Journal ArticleDOI
10 Jun 2005-Science
TL;DR: It is reported that, following allergen challenge, wild-type mice exhibiting airway hyperresponsivity have increased airway levels of the enzyme GSNO reductase (GSNOR) and are depleted of lung S-nitrosothiols (SNOs).
Abstract: Mechanisms that protect against asthma remain poorly understood. S-nitrosoglutathione (GSNO), an endogenous bronchodilator, is depleted from asthmatic airways, suggesting a protective role. We report that, following allergen challenge, wild-type mice exhibiting airway hyperresponsivity have increased airway levels of the enzyme GSNO reductase (GSNOR) and are depleted of lung S-nitrosothiols (SNOs). In contrast, mice with genetic deletion of GSNOR exhibit increases in lung SNOs and are protected from airway hyperresponsivity. Our results indicate that endogenous SNOs, governed by GSNOR, are critical regulators of airway responsivity and may provide new therapeutic approaches to asthma.

Journal ArticleDOI
TL;DR: The objective of the study was to quantitatively verify the feasibility of MTBE degradation with Fenton reagent under initially anaerobic conditions, and the conclusions may be potentially helpful to further develop an effective in situ treatment ofMTBE-contaminated groundwater.