University of Basel

About: University of Basel is a education organization based out in Basel, Basel-Stadt, Switzerland. It is known for research contribution in the topics: Population & Transplantation. The organization has 25084 authors who have published 52975 publications receiving 2388002 citations. The organization is also known as: Universität Basel & Basel University.

Methylation-associated Silencing of the Tissue Inhibitor of Metalloproteinase-3 Gene Suggests a Suppressor Role in Kidney, Brain, and Other Human Cancers

Abstract: Tissue inhibitor of metalloproteinase-3 (TIMP-3) antagonizes matrix metalloproteinase activity and can suppress tumor growth, angiogenesis, invasion, and metastasis. Loss of TIMP-3 has been related to the acquisition of tumorigenesis. Herein, we show that TIMP-3 is silenced in association with aberrant promoter-region methylation in cell lines derived from human cancers. TIMP-3 expression was restored after 5-aza-2'deoxycytidine-mediated demethylation of the TIMP-3 proximal promoter region. Genomic bisulfite sequencing revealed that TIMP-3 silencing was related to the overall density of methylation and that discrete regions within the TIMP-3 CpG island may be important for the silencing of this gene. Aberrant methylation of TIMP-3 occurred in primary cancers of the kidney, brain, colon, breast, and lung, but not in any of 41 normal tissue samples. The most frequent TIMP-3 methylation was found in renal cancers, which originate in the tissue that normally expresses the highest TIMP-3 levels. This methylation correlated with a lack of detectable TIMP-3 protein in these tumors. Together, these data show that methylation-associated inactivation of TIMP-3 is frequent in many human tumors.

Carbon nitride deposited using energetic species: a review on xps studies

Abstract: This paper reviews x-ray photoelectron spectroscopy studies on carbon nitride (CN) and reports on results obtained from CN thin films prepared by mass selected ion-beam deposition. The core-level spectra of samples deposited at room temperature show that nitrogen is incorporated into the amorphous network in two different bonding configurations; carbon has three main bonding configurations whose relative contributions vary as a function of the nitrogen content. For samples deposited at elevated temperatures an ordering of the amorphous CN network towards a crystalline graphitelike structure is observed. Furthermore, both deposition at elevated temperatures (350 \ifmmode^\circ\else\textdegree\fi{}C) and post-deposition ion irradiation have a strong influence on the bonding configuration in the CN films. Based on these results and the results reported in the reviewed literature a picture of the microstructure of carbon nitride deposited using energetic species is developed.

New developments in diagnosis and treatment of infection in orthopedic implants.

Abstract: Orthopedic implants have revolutionized treatment of bone fractures and noninfectious joint arthritis. Today, the risk for orthopedic device-related infection (ODRI) is <1%-2%. However, the absolute number of patients with infection continuously increases as the number of patients requiring such implants grows. Treatment of ODRIs most frequently includes long-term antimicrobial treatment and removal of the implant. Recent evidence from observational trials and 1 randomized clinical trial indicate that a subset of patients can be successfully treated with retention of the implant. Patients eligible for such a treatment must meet the following criteria: acute infection defined as signs and symptoms lasting <14-28 days, an unambiguous diagnosis based on histopathology and microbiology, a stable implant, and susceptibility of the microorganism to an effective orally available antimicrobial agent.

Redesigning the body plan of Drosophila by ectopic expression of the homoeotic gene Antennapedia.

Abstract: Genetic and molecular studies on the expression of Antennapedia (Antp) have suggested that this gene specifies mainly the second thoracic segment. On the basis of our molecular analysis of dominant gain-of-function mutants we have postulated that the transformation of antennae into second legs is due to the ectopic overexpression of the Antp+ protein. This hypothesis was tested by inserting the complementary DNA encoding the normal Antp protein into a heat-shock expression vector and subsequent germ-line transformation. As predicted, heat induction at defined larval stages leads to the transformation of antennae into second legs. The dorsal part of the head can also be transformed into second thoracic structures (scutum) indicating that Antp indeed specifies the second thoracic segment. By ectopic overexpression of the Antp protein the body plan of the fruit fly can be altered in a predictable way.

Multiple Temporalities of Language and Body in Interaction: Challenges for Transcribing Multimodality

Abstract: The article focuses on the principles of multimodal CA, the way they can be operationalized in a transcription system, and the analytical and conceptual consequences of transcription choices. Elaborating on the foundations of multimodal CA and on the basis of video recordings of French and Swiss German encounters, as well as animal interactions, the article discusses classic and contemporary challenges for transcription and analysis, such as beyond gesture and gaze, body arrangements in interactional spaces, larger groups, material environments, mobile settings, silent activities, and animal encounters. It also highlights the diversity of multimodal practices involved: mobilizing occasioned material resources, movements not only of the upper (head, gesture) but also the lower (feet, legs, posterior) parts of the body, haptic contacts touching objects and coparticipants, and camera movements. The precise transcription of relevant details reveals complex arrangements of multimodal resources and gest...