scispace - formally typeset
Search or ask a question

Showing papers by "University of Bonn published in 2000"


Journal ArticleDOI
TL;DR: In this paper, the authors apply the concept of phase synchronization of chaotic and/or noisy systems and the statistical distribution of the relative instantaneous phases to electroencephalograms (EEGs) recorded from patients with temporal lobe epilepsy.

1,232 citations


Journal ArticleDOI
TL;DR: In this paper, it was shown that transport inequalities, similar to the one derived by M. Talagrand (1996, Geom. Funct. Anal. 6, 587-600) for the Gaussian measure, are implied by logarithmic Sobolev inequalities.

1,080 citations


Journal ArticleDOI
TL;DR: It is reported that minocycline delays disease progression, inhibits casp enzyme-1 and caspase-3 mRNA upregulation, and decreases inducible nitric oxide synthetase activity, in the R6/2 mouse model of Huntington disease.
Abstract: Huntington disease is an autosomal dominant neurodegenerative disease with no effective treatment. Minocycline is a tetracycline derivative with proven safety. After ischemia, minocycline inhibits caspase-1 and inducible nitric oxide synthetase upregulation, and reduces infarction. As caspase-1 and nitric oxide seem to play a role in Huntington disease, we evaluated the therapeutic efficacy of minocycline in the R6/2 mouse model of Huntington disease. We report that minocycline delays disease progression, inhibits caspase-1 and caspase-3 mRNA upregulation, and decreases inducible nitric oxide synthetase activity. In addition, effective pharmacotherapy in R6/2 mice requires caspase-1 and caspase-3 inhibition. This is the first demonstration of caspase-1 and caspase-3 transcriptional regulation in a Huntington disease model.

1,052 citations


Journal ArticleDOI
TL;DR: A high intake of dietary fiber, particularly of the soluble type, above the level recommended by the ADA, improves glycemic control, decreases hyperinsulinemia, and lowers plasma lipid concentrations in patients with type 2 diabetes.
Abstract: Background The effect of increasing the intake of dietary fiber on glycemic control in patients with type 2 diabetes mellitus is controversial. Methods In a randomized, crossover study, we assigned 13 patients with type 2 diabetes mellitus to follow two diets, each for six weeks: a diet containing moderate amounts of fiber (total, 24 g; 8 g of soluble fiber and 16 g of insoluble fiber), as recommended by the American Diabetes Association (ADA), and a highfiber diet (total, 50 g; 25 g of soluble fiber and 25 g of insoluble fiber) containing foods not fortified with fiber (unfortified foods). Both diets, prepared in a research kitchen, had the same macronutrient and energy content. We compared the effects of the two diets on glycemic control and plasma lipid concentrations. Results Compliance with the diets was excellent. During the sixth week of the high-fiber diet, as compared with the sixth week of the ADA diet, mean daily preprandial plasma glucose concentrations were 13 mg per deciliter (0.7 mmol per liter) lower (95 percent confidence interval, 1 to 24 mg per deciliter [0.1 to 1.3 mmol per liter]; P=0.04) and mean daily urinary glucose excretion was 1.3 g lower (median difference, 0.23 g; 95 percent confidence interval, 0.03 to 1.83; P=0.008). The high-fiber diet also lowered the area under the curve for 24-hour plasma glucose and insulin concentrations, which were measured every two hours, by 10 percent (P=0.02) and 12 percent (P=0.05), respectively. The high-fiber diet reduced plasma total cholesterol concentrations by 6.7 percent (P=0.02), triglyceride concentrations by 10.2 percent (P=0.02), and very-low-density lipoprotein cholesterol concentrations by 12.5 percent (P=0.01). Conclusions A high intake of dietary fiber, particularly of the soluble type, above the level recommended by the ADA, improves glycemic control, decreases hyperinsulinemia, and lowers plasma lipid concentrations in patients with type 2 diabetes. (N Engl J

1,046 citations


Journal ArticleDOI
TL;DR: Clonal composition and T cell receptor (TCR) repertoire of CD4+ and CD8+ T cells infiltrating actively demyelinating multiple sclerosis (MS) lesions were determined with unprecedented resolution at the level of single cells.
Abstract: Clonal composition and T cell receptor (TCR) repertoire of CD4+ and CD8+ T cells infiltrating actively demyelinating multiple sclerosis (MS) lesions were determined with unprecedented resolution at the level of single cells. Individual CD4+ or CD8+ T cells were isolated from frozen sections of lesional tissue by micromanipulation and subjected to single target amplification of TCR-β gene rearrangements. This strategy allows the assignment of a TCR variable region (V region) sequence to the particular T cell from which it was amplified. Sequence analysis revealed that in both cases investigated, the majority of CD8+ T cells belonged to few clones. One of these clones accounted for 35% of CD8+ T cells in case 1. V region sequence comparison revealed signs of selection for common peptide specificities for some of the CD8+ T cells in case 1. In both cases, the CD4+ T cell population was more heterogeneous. Most CD4+ and CD8+ clones were represented in perivascular infiltrates as well as among parenchymal T cells. In case 2, two of the CD8+ clones identified in brain tissue were also detected in peripheral blood. Investigation of the antigenic specificities of expanded clones may help to elucidate their functional properties.

915 citations


Journal ArticleDOI
TL;DR: Two novel markers of quiescent satellite cells are described: CD34, an established marker of hematopoietic stem cells, and Myf5, the earliest marker of myogenic commitment, which are concluded to define quyingcent, committed precursors and speculate that the CD34−ve, Myf 5−ve minority may be involved in maintaining the lineage-committed majority.
Abstract: Skeletal muscle is one of a several adult post-mitotic tissues that retain the capacity to regenerate. This relies on a population of quiescent precursors, termed satellite cells. Here we describe two novel markers of quiescent satellite cells: CD34, an established marker of hematopoietic stem cells, and Myf5, the earliest marker of myogenic commitment. CD34+ve myoblasts can be detected in proliferating C2C12 cultures. In differentiating cultures, CD34+ve cells do not fuse into myotubes, nor express MyoD. Using isolated myofibers as a model of synchronous precursor cell activation, we show that quiescent satellite cells express CD34. An early feature of their activation is alternate splicing followed by complete transcriptional shutdown of CD34. This data implicates CD34 in the maintenance of satellite cell quiescence. In heterozygous Myf5nlacZ/+ mice, all CD34+ve satellite cells also express β-galactosidase, a marker of activation of Myf5, showing that quiescent satellite cells are committed to myogenesis. All such cells are positive for the accepted satellite cell marker, M-cadherin. We also show that satellite cells can be identified on isolated myofibers of the myosin light chain 3F-nlacZ-2E mouse as those that do not express the transgene. The numbers of satellite cells detected in this way are significantly greater than those identified by the other three markers. We conclude that the expression of CD34, Myf5, and M-cadherin defines quiescent, committed precursors and speculate that the CD34−ve, Myf5−ve minority may be involved in maintaining the lineage-committed majority.

898 citations


Journal ArticleDOI
TL;DR: A broad class of family‐based association tests that are adjusted for admixture; use either dichotomous or measured phenotypes; accommodate phenotype‐unknown subjects; use nuclear families, sibships or a combination of the two, permit multiple nuclear families from a single pedigree; incorporate di‐ or multi‐allelic marker data; and permit adjustment for covariates and gene‐by‐environment interactions are described.
Abstract: We describe a broad class of family-based association tests that are adjusted for admixture; use either dichotomous or measured phenotypes; accommodate phenotype-unknown subjects; use nuclear families, sibships or a combination of the two, permit multiple nuclear families from a single pedigree; incorporate di- or multi-allelic marker data; allow additive, dominant or recessive models; and permit adjustment for covariates and gene-by-environment interactions. The test statistic is the covariance between a user-specified function of the genotype and a user-specified function of the trait. The distribution of the statistic is computed using the appropriate conditional distribution of offspring genotypes that adjusts for admixture. Genet. Epidemiol. 19(Suppl 1):S36–S42, 2000. © 2000 Wiley-Liss, Inc.

896 citations


Proceedings ArticleDOI
24 Apr 2000
TL;DR: A probabilistic approach for the coordination of multiple robots which, in contrast to previous approaches, simultaneously takes into account the costs of reaching a target point and the utility of target points.
Abstract: In this paper we consider the problem of exploring an unknown environment by a team of robots. As in single-robot exploration the goal is to minimize the overall exploration time. The key problem to be solved therefore is to choose appropriate target points for the individual robots so that they simultaneously explore different regions of their environment. We present a probabilistic approach for the coordination of multiple robots which, in contrast to previous approaches, simultaneously takes into account the costs of reaching a target point and the utility of target points. The utility of target points is given by the size of the unexplored area that a robot can cover with its sensors upon reaching a target position. Whenever a target point is assigned to a specific robot, the utility of the unexplored area visible from this target position is reduced for the other robots. This way, a team of multiple robots assigns different target points to the individual robots. The technique has been implemented and tested extensively in real-world experiments and simulation runs. The results given in this paper demonstrate that our coordination technique significantly reduces the exploration time compared to previous approaches.

798 citations


Journal ArticleDOI
TL;DR: The purification of muscle-derived stem cells from the mdx mouse, an animal model for Duchenne muscular dystrophy, yields a putative muscle- derived stem cell, mc13, that is capable of differentiating into both myogenic and osteogenic lineage in vitro and in vivo.
Abstract: Several recent studies suggest the isolation of stem cells in skeletal muscle, but the functional properties of these muscle-derived stem cells is still unclear. In the present study, we report the purification of muscle-derived stem cells from the mdx mouse, an animal model for Duchenne muscular dystrophy. We show that enrichment of desmin+ cells using the preplate technique from mouse primary muscle cell culture also enriches a cell population expressing CD34 and Bcl-2. The CD34+ cells and Bcl-2+ cells were found to reside within the basal lamina, where satellite cells are normally found. Clonal isolation and characterization from this CD34+Bcl-2+ enriched population yielded a putative muscle-derived stem cell, mc13, that is capable of differentiating into both myogenic and osteogenic lineage in vitro and in vivo. The mc13 cells are c-kit and CD45 negative and express: desmin, c-met and MNF, three markers expressed in early myogenic progenitors; Flk-1, a mouse homologue of KDR recently identified in humans as a key marker in hematopoietic cells with stem cell-like characteristics; and Sca-1, a marker for both skeletal muscle and hematopoietic stem cells. Intramuscular, and more importantly, intravenous injection of mc13 cells result in muscle regeneration and partial restoration of dystrophin in mdx mice. Transplantation of mc13 cells engineered to secrete osteogenic protein differentiate in osteogenic lineage and accelerate healing of a skull defect in SCID mice. Taken together, these results suggest the isolation of a population of muscle-derived stem cells capable of improving both muscle regeneration and bone healing.

665 citations


Journal ArticleDOI
TL;DR: The results suggest that extraverts' sociability may be a by-product of reward sensitivity, rather than the core feature of the trait.
Abstract: Psychologists have not determined the defining characteristics of extraversion. In four studies, the authors tested the hypothesis that extraversion facets are linked by reward sensitivity. According to this hypothesis, only facets that reflect reward sensitivity should load on a higher order extraversion factor. This model was tested against a model in which sociability links the facets. The authors also tested the generalizability of the model in a diverse sample of participants from 39 nations, and they tested the model using widely used extraversion scales. Results of all studies indicate that only facets that reflect reward sensitivity load on a higher order extraversion factor and that this factor correlates strongly with pleasant affect. Although sociability is undoubtedly an important part of extraversion, these results suggest that extraverts' sociability may be a by-product of reward sensitivity, rather than the core feature of the trait.

644 citations


Journal ArticleDOI
TL;DR: Quality of life is as impaired in patients with intermittent atrial fibrillation as in Patients with significant structural heart disease and patients' perception of QoL is not dependent on the objective measures of disease severity that are usually employed.

Journal ArticleDOI
Abstract: This paper describes Minerva, an interactive tour-guide robot that was successfully deployed in a Smithsonian museum. Minerva’s software is pervasively probabilistic, relying on explicit representations of uncertainty in perception and control. This article describes Minerva’s major software components, and provides a comparative analysis of the results obtained in the Smithsonian museum. During two weeks of highly successful operation, the robot interacted with thousands of people, both in the museum and through the Web, traversing more than 44km at speeds of up to 163 cm/sec in the unmodie d museum.

Journal ArticleDOI
TL;DR: The accuracy of MR imaging is significantly higher than that of conventional imaging in screening high-risk women and can be caused by an atypical manifestation of hereditary breast cancers at both conventional and MR imaging and by contrast material enhancement associated with hormonal stimulation.
Abstract: PURPOSE: To compare magnetic resonance (MR) imaging with conventional imaging in screening high-risk women. MATERIALS AND METHODS: This prospective trial included 192 asymptomatic and six symptomatic women who, on the basis of personal or family history or genetic analysis, were suspected or proved to carry a breast cancer susceptibility gene. RESULTS: Fifteen breast cancers were identified: nine in the 192 asymptomatic women (six in the first and three in the second screening round) and six in the symptomatic patients. Concerning the asymptomatic women, four of the nine breast cancers were detected and correctly classified with mammography and ultrasonography (US) combined; another two cancers were visible as well-circumscribed masses and were diagnosed as fibroadenomas. MR imaging allowed the correct classification and local staging of all nine cancers. In 105 asymptomatic women with validation of the 1st-year screening results, the sensitivities of mammography, US, and MR imaging were 33%, 33% (mammogr...

Journal ArticleDOI
TL;DR: Membrane-bound P2-receptors mediate the actions of extracellular nucleotides in cell-to-cell signalling and may be involved in the modulation of neuro-neural signalling transmission.
Abstract: Membrane-bound P2-receptors mediate the actions of extracellular nucleotides in cell-to-cell signalling. P2X-receptors are ligand-gated ion channels, whereas P2Y-receptors belong to the superfamily of G-protein-coupled receptors. So far, the P2Y family is composed of eight cloned and functionally defined subtypes. Five of them (P2Y1, P2Y2, P2Y4, P2Y6 and P2Y11) are present in human tissues. The P2Y3-, p2y8- and tp2y-receptors may be species orthologues. The principal physiological agonists of the cloned human P2Y-receptors are ADP (P2Y1), UTP/ATP (P2Y2), UTP (P2Y4), UDP (P2Y6) and ATP (P2Y11). The rat P2Y4-receptor is activated by both UTP and ATP. Specific patterns of polar amino acid residues in the exofacial portions of transmembrane domains (TMs) 6 and 7 of the P2Y-receptors may account for the ligand specificity of the subtypes. Suramin acts as an antagonist at most P2Y-receptors with the exception of P2Y4- and tp2y-receptors. PPADS has been shown to block P2Y1-, the human P2Y4- and P2Y6-receptors. The nucleotide analogue 2'-deoxy-N6-methyladenosine-3',5'-bisphosphate (MRS 2179), in contrast, seems to be a potent and selective antagonist at the P2Y1-receptor. All cloned and functionally expressed P2Y-receptors are able to couple to phospholipase C. The P2Y11-receptor mediates in addition a stimulation of adenylate cyclase and the tp2y-receptor an inhibition of this signal transduction pathway. Other functionally defined subtypes, e.g., the receptor mediating an inhibition of adenylate cyclase in blood platelets, are not yet cloned.

Journal ArticleDOI
TL;DR: This review shall give a comprehensive summary of the main functional properties of ion channels and ionotropic receptors expressed by macroglial cells, i.e., by astrocytes, oligodendrocycles and Schwann cells, as well as glutamate, GABA and ATP activated ionotropic receptor.

Journal ArticleDOI
TL;DR: It is demonstrated that ligand bound estrogen receptor α is required for rapid activation of the IGF-1R signaling cascade.


Journal ArticleDOI
TL;DR: In this paper, regional landslide-triggering rainfall thresholds were calculated using an empirical "Antecedent Daily Rainfall Model" in three landslide-prone regions in the North Island of New Zealand.
Abstract: —Rainfall-triggered landslides constitute a serious hazard and an important geomorphic process in many parts of the world. Attempts have been made at various scales in a number of countries to investigate triggering conditions in order to identify patterns in behaviour and, ultimately, to define or calculate landslide-triggering rainfall thresholds. This study was carried out in three landslide-prone regions in the North Island of New Zealand. Regional landslide-triggering rainfall thresholds were calculated using an empirical “Antecedent Daily Rainfall Model.” In this model, first introduced by, triggering rainfall conditions are represented by a combination of rainfall occurring in a period before the event (antecedent rainfall) and rainfall on the day of the event. A physically-based decay coefficient is derived for each region from the recessional behaviour of storm hydrographs and is used to produce an index for antecedent rainfall. Statistical techniques are employed to obtain the thresholds which best separate the rainfall conditions associated with landslide occurrence from those of non-occurrence or a given probability of occurrence.The resultant regional models are able to represent the probability of occurrence of landsliding events on the basis of rainfall conditions. The calculated thresholds show regional differences in susceptibility of a given landscape to landslide-triggering rainfall. These differences relate to both the landslide database and the difference of existing physical conditions between the regions.

Journal ArticleDOI
01 Aug 2000-Gut
TL;DR: TIPS provides long term renal function and probably survival benefits in the majority of non-transplantable cirrhotics with HRS and warrant controlled trials evaluating TIPS in the management of HRS.
Abstract: BACKGROUND Recent small studies on hepatorenal syndrome (HRS) indicate some clinical benefit after transjugular intrahepatic portosystemic stent-shunt (TIPS) but sufficient long term data are lacking. AIM We studied prospectively feasibility, safety, and long term survival after TIPS in 41 non-transplantable cirrhotics with HRS (phase II study). PATIENTS AND METHODS HRS was diagnosed using current criteria (severe (type I) HRS, n=21; moderate (type II) HRS, n=20). Thirty one patients (14 type I, 17 type II) received TIPS (8–10 mm) while advanced liver failure excluded shunting in 10. During follow up (median 24 months) we analysed renal function and survival (Kaplan-Meier). RESULTS TIPS markedly reduced the portal pressure gradient (21 (5) to 13 (4) mm Hg (mean (SD)); p CONCLUSIONS TIPS provides long term renal function and probably survival benefits in the majority of non-transplantable cirrhotics with HRS. These data warrant controlled trials evaluating TIPS in the management of HRS.

Journal ArticleDOI
TL;DR: In Cx45(-)(/)(-) embryos, vasculogenesis was normal, but subsequent transformation into mature vessels was interrupted, and development of different types of vessels was impaired to a varying extent, which possibly reflects the complementation by other connexin(s).
Abstract: In order to reveal the biological function(s) of the gap-junction protein connexin 45 (Cx45), we generated Cx45-deficient mice with targeted replacement of the Cx45-coding region with the lacZ reporter gene. Heterozygous Cx45(+/)(−) mice showed strong expression of the reporter gene in vascular and visceral smooth muscle cells. Cx45-deficient embryos exhibited striking abnormalities in vascular development and died between embryonic day (E) 9.5 and 10.5. Differentiation and positioning of endothelial cells appeared to be normal, but subsequent development of blood vessels revealed impaired formation of vascular trees in the yolk sac, impaired allantoic mesenchymal ingrowth and capillary formation in the labyrinthine part of the placenta, and arrest of arterial growth, including a failure to develop a smooth muscle layer surrounding the major arteries of the embryo proper. As a consequence, the hearts of most Cx45-deficient embryos were dilated. The abnormal development of the vasculature in the yolk sac of Cx45(−)(/)(−) embryos could be caused by defective TGFbeta signalling, as the amount of TGF beta1 protein in the epithelial layer of the yolk sac was largely decreased in the E9.5 Cx45(−)(/)(−) embryo, compared with the wild-type embryo. The defective vascular development was accompanied by massive apoptosis, which began in some embryos at E8.5 and was abundant in virtually all tissues of the embryos at E9.5. We conclude that in Cx45(−)(/)(−) embryos, vasculogenesis was normal, but subsequent transformation into mature vessels was interrupted. Development of different types of vessels was impaired to a varying extent, which possibly reflects the complementation by other connexin(s).

Journal ArticleDOI
TL;DR: It is speculated that 24S-OH-Chol plasma levels may potentially be used as an early biochemical marker for an altered cholesterol homeostasis in the central nervous system of AD patients.

Journal ArticleDOI
TL;DR: The amount of regularity in the EEG increases with increasing desflurane concentrations, suggesting that the approximate entropy could be a useful EEG measure of anesthetic drug effect.
Abstract: Background:The authors hypothesized that the electroencephalogram (EEG) during higher anesthetic concentrations would show more “order” and less “randomness” than at lower anesthetic concentrations. “Approximate entropy” is a new statistical parameter derived from the Kolmogorov-Sinai entropy formul

Journal ArticleDOI
TL;DR: Maintenance chemotherapy would seem to be more effective in low-risk medulloblastoma, especially in patients older than 6 years of age, and quality control of radiotherapy revealed correct treatment in more than 88% for dose prescription, more than 90% for coverage of target volume, and 98% for field matching.
Abstract: Purpose: The German Society of Pediatric Hematology and Oncology (GPOH) conducted a randomized, prospective, multicenter trial (HIT ’91) in order to improve the survival of children with medulloblastoma by using postoperative neoadjuvant chemotherapy before radiation therapy as opposed to maintenance chemotherapy after immediate postoperative radiotherapy. Methods and Materials: Between 1991 and 1997, 158 patients were enrolled and 137 patients randomized. Seventy-two patients were allocated to receive neoadjuvant chemotherapy before radiotherapy (arm I, investigational). Chemotherapy consisted of ifosfamide, etoposide, intravenous high-dose methotrexate, cisplatin, and cytarabine given in two cycles. In arm II (standard arm), 65 patients were assigned to receive immediate postoperative radiotherapy, with concomitant vincristine followed by 8 cycles of maintenance chemotherapy consisting of cisplatin, CCNU, and vincristine (“Philadelphia protocol”). All patients received radiotherapy to the craniospinal axis (35.2 Gy total dose, 1.6 Gy fractionated dose / 5 times per week followed by a boost to posterior fossa with 20 Gy, 2.0 Gy fractionated dose). Results: During chemotherapy Grade III/IV infections were predominant in arm I (40%). Peripheral neuropathy and ototoxicity were prevailing in arm II (37% and 34%, respectively). Dose modification was necessary in particular in arm II (63%). During radiotherapy acute toxicity was mild in the majority of patients and equally distributed in both arms. Myelosuppression led to a mean prolongation of treatment time of 11.5 days in arm I and 7.5 days in arm II, and interruptions in 35% of patients in arm I. Quality control of radiotherapy revealed correct treatment in more than 88% for dose prescription, more than 88% for coverage of target volume, and 98% for field matching. At a median follow-up of 30 months (range 1.4–62 months), the Kaplan-Meier estimates for relapse-free survival at 3 years for all randomized patients were 0.70 ± 0.08; for patients with residual disease: 0.72 ±0.06; without residual disease: 0.68 ± 0.09; M0: 0.72 ± 0.04; M1: 0.65 ± 0.12; and M2/3: 0.30 ± 0.15. For all randomized patients without M2/3 disease: 0.65± 0.05 (arm I) and 0.78 ± 0.06 (arm II) (p < 0.03); patients between 3 and 5.9 years: 0.60 ± 0.13 and 0.64 ± 0.14, respectively, but patients between 6 and 18 years: 0.62 ± 0.09 and 0.84 ± 0.08, respectively (p < 0.03). In a univariate analysis the only negative prognostic factors were M2/3 disease (p < 0.002) and an age of less than 8 years (p < 0.03). Conclusions: Maintenance chemotherapy would seem to be more effective in low-risk medulloblastoma, especially in patients older than 6 years of age. Neoadjuvant chemotherapy was accompanied by increased myelotoxicity of the subsequent radiotherapy, causing a higher rate of interruptions and an extended overall treatment time. Delayed and/or protracted radiotherapy may therefore have a negative impact on outcome. M2/3 disease was associated with a poor survival in both arms, suggesting the need for a more intensive treatment. Young age and M2/3 stage were negative prognostic factors in medulloblastoma, but residual or M1 disease was not, suggesting a new stratification system for risk subgroups. High quality of radiotherapy may be a major contributing factor for the overall outcome.

Journal ArticleDOI
TL;DR: An energy decomposition scheme based on the block-localized wave function (BLW) method is proposed in this paper, which is the definition and the full optimization of the diabatic state wave function, where the charge transfer among interacting molecules is deactivated.
Abstract: An energy decomposition scheme based on the block-localized wave function (BLW) method is proposed. The key of this scheme is the definition and the full optimization of the diabatic state wave function, where the charge transfer among interacting molecules is deactivated. The present energy decomposition (ED), BLW-ED, method is similar to the Morokuma decomposition scheme in definition of the energy terms, but differs in implementation and the computational algorithm. In addition, in the BLW-ED approach, the basis set superposition error is fully taken into account. The application of this scheme to the water dimer and the lithium cation–water clusters reveals that there is minimal charge transfer effect in hydrogen-bonded complexes. At the HF/aug-cc-PVTZ level, the electrostatic, polarization, and charge-transfer effects contribute 65%, 24%, and 11%, respectively, to the total bonding energy (−3.84 kcal/mol) in the water dimer. On the other hand, charge transfer effects are shown to be significant in Lewis acid–base complexes such as H3NSO3 and H3NBH3. In this work, the effect of basis sets used on the energy decomposition analysis is addressed and the results manifest that the present energy decomposition scheme is stable with a modest size of basis functions.

Journal ArticleDOI
TL;DR: Constitutive expression of the GFP-mouse talin fusion protein in transgenic Arabidopsis allowed in vivo confirmation of the presence of distinct F-actin meshworks within outgrowing bulges and at tips of young root hairs, which suggests that installation of the actin-based tip growth machinery takes place only after expansin-associated bulge formation and requires assembly of profilin-supported dynamic F-actson meshworks.

Journal ArticleDOI
TL;DR: Because all SMA patients retain at least one SMN2 copy, these results show that an in vivo modulation of SMN RNA processing could serve as a therapeutic strategy to prevent SMA.
Abstract: Spinal muscular atrophy (SMA), a common motor neuron disease in humans, results from loss of functional survival motor neuron (SMN1) alleles. A nearly identical copy of the gene, SMN2, fails to provide protection from SMA because of a single translationally silent nucleotide difference in exon 7. This likely disrupts an exonic splicing enhancer and causes exon 7 skipping, leading to abundant production of a shorter isoform, SMN2Δ7. The truncated transcript encodes a less stable protein with reduced self-oligomerization activity that fails to compensate for the loss of SMN1. This report describes the identification of an in vivo regulator of SMN mRNA processing. Htra2-β1, an SR-like splicing factor and ortholog of Drosophila melanogaster transformer-2, promoted the inclusion of SMN exon 7, which would stimulate full-length SMN2 expression. Htra2-β1 specifically functioned through and bound an AG-rich exonic splicing enhancer in SMN exon 7. This effect is not species-specific as expression of Htra2-β1 in human or mouse cells carrying an SMN2 minigene dramatically increased production of full-length SMN2. This demonstrates that SMN2 mRNA processing can be modulated in vivo. Because all SMA patients retain at least one SMN2 copy, these results show that an in vivo modulation of SMN RNA processing could serve as a therapeutic strategy to prevent SMA.

Journal ArticleDOI
TL;DR: A high proportion of culture extracts of sponge-associated fungi was biologically active in tests to detect antifungal, antialgal, and antibacterial activity, cytotoxicity and inhibition of reverse-transcriptase and tyrosine kinase.

Journal ArticleDOI
TL;DR: In this article, the phase boundaries of the Mott insulators and charge-density wave phases are determined for the case of on-site interactions and additional nearest-neighbor interactions.
Abstract: We study the one-dimensional Bose-Hubbard model using the density-matrix renormalization group. For the cases of on-site interactions and additional nearest-neighbor interactions the phase boundaries of the Mott insulators and charge-density wave phases are determined. We find a direct phase transition between the charge-density wave phase and the superfluid phase, and no supersolid or normal phases. In the presence of nearest-neighbor interaction the charge density wave phase is completely surrounded by a region in which the effective interactions in the superfluid phase are repulsive. In this region a single impurity causes the system to be insulating. An even bigger region of the superfluid phase is driven into a Bose-glass phase by any finite quenched disorder. We determine the boundaries of both regions in the phase diagram. The ac conductivity of the superfluid phase in the attractive and the repulsive region is calculated, and a big superfluid stiffness is found in the attractive as well as the repulsive region.

Journal ArticleDOI
TL;DR: The evolutionary biology of the myxobacteria is emphasized with respect to their social behavior and the molecular basis of their signal chains, and most important within the metabolic physiology are the biologically active secondary metabolites of myXobacteria and their molecular mechanisms of action.
Abstract: This review presents an overview of the present status of the biology of the myxobacteria, including the molecular biology of the systems that control and regulate myxobacterial gliding movement and morphogenesis. The present status of myxobacterial taxonomy and phylogeny is described. The evolutionary biology of the myxobacteria is emphasized with respect to their social behavior and the molecular basis of their signal chains. Most important within the metabolic physiology are the biologically active secondary metabolites of myxobacteria and their molecular mechanisms of action. The global distribution of myxobacteria in soils is described on the basis of data given in the literature as well as of comprehensive analyses of 1398 soil samples from 64 countries of all continents. The results are analyzed with respect to the spectrum and number of species depending on ecological and habitat-specific factors. The myxobacterial floras of different climate zones are compared. Included are myxobacterial species adapted to extreme biotopes. The efficiency of different methods used presently for isolation of myxobacteria is compared.

Journal ArticleDOI
TL;DR: The mat-forming monocotyledons are particularly remarkable due to the possession of roots with a velamen radicum, which is reported here in the genus Borya for the first time.
Abstract: Although desiccation tolerance is common in non-vascular plants, this adaptive trait is very rare in vascular plants. Desiccation-tolerant vascular plants occur particularly on rock outcrops in the tropics and to a lesser extent in temperate zones. They are found from sea level up to 2800 m. The diversity of desiccation-tolerant species as measured by number of species is highest in East Africa, Madagascar and Brazil, where granitic and gneissic outcrops, or inselbergs, are their main habitat. Inselbergs frequently occur as isolated monoliths characterized by extreme environmental conditions (i.e., edaphic dryness, high degrees of insolation). On tropical inselbergs, desiccation-tolerant monocotyledons (i.e., Cyperaceae and Velloziaceae) dominate in mat-like communities which cover even steep slopes. Mat-forming desiccation-tolerant species may attain considerable age (hundreds of years) and size (several m in height, for pseudostemmed species). Both homoiochlorophyllous and poikilochlorophyllous species occur. In their natural habitats, both groups survive dry periods of several months and regain their photosynthetic activity within a few days after rainfall. Other desiccation-tolerant species colonize shallow depressions, crevices and even temporarily water-filled rock pools on inselbergs. Desiccation-tolerant vascular plants occur in 13 families and are best represented within the monocotyledons and ferns. Only a few desiccation-tolerant dicots exist, in the Gesneriaceae, Myrothamnaceae and Scrophulariaceae. In total, about 330 species of vascular desiccation-tolerant plants are known, of which nearly 90% occur on inselbergs. With regard to morphological adaptations, the mat-forming monocotyledons are particularly remarkable due to the possession of roots with a velamen radicum, which is reported here in the genus Borya for the first time.