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Showing papers by "University of Bremen published in 2006"


Journal ArticleDOI
TL;DR: The properties of the ground state configuration are elucidated to give a concise definition of communities as cohesive subgroups in networks that is adaptive to the specific class of network under study.
Abstract: Starting from a general ansatz, we show how community detection can be interpreted as finding the ground state of an infinite range spin glass. Our approach applies to weighted and directed networks alike. It contains the ad hoc introduced quality function from [J. Reichardt and S. Bornholdt, Phys. Rev. Lett. 93, 218701 (2004)] and the modularity Q as defined by Newman and Girvan [Phys. Rev. E 69, 026113 (2004)] as special cases. The community structure of the network is interpreted as the spin configuration that minimizes the energy of the spin glass with the spin states being the community indices. We elucidate the properties of the ground state configuration to give a concise definition of communities as cohesive subgroups in networks that is adaptive to the specific class of network under study. Further, we show how hierarchies and overlap in the community structure can be detected. Computationally efficient local update rules for optimization procedures to find the ground state are given. We show how the ansatz may be used to discover the community around a given node without detecting all communities in the full network and we give benchmarks for the performance of this extension. Finally, we give expectation values for the modularity of random graphs, which can be used in the assessment of statistical significance of community structure.

1,845 citations


Journal ArticleDOI
TL;DR: Organizational knowledge creation is the process of making available and amplifying knowledge created by individuals as well as crystallizing and connecting it to an organization's knowledge system as discussed by the authors, in other words, what individuals come to know in their (work-)life benefits their colleagues and, eventually, the larger organization.
Abstract: Organizational knowledge creation is the process of making available and amplifying knowledge created by individuals as well as crystallizing and connecting it to an organization's knowledge system. In other words, what individuals come to know in their (work-)life benefits their colleagues and, eventually, the larger organization. The theory explaining this process — the organizational knowledge creation theory — has developed rapidly in academia and been broadly diffused in management practice over the last 15 years. This article reviews the theory's central elements and identifies the evolving paths taken by academic work that uses the theory as a point of departure. The article furthermore proposes areas in which future research can advance the theory of organizational knowledge creation.

996 citations


Journal ArticleDOI
TL;DR: It is shown that extractable archaeal rRNA, selecting only for active community members in these ecosystems, is dominated by sequences of uncultivated Archaea affiliated with the Marine Benthic Group B and the Miscellaneous Crenarchaeotal Group, whereas known methanotrophic Archaea are not detectable.
Abstract: Studies of deeply buried, sedimentary microbial communities and associated biogeochemical processes during Ocean Drilling Program Leg 201 showed elevated prokaryotic cell numbers in sediment layers where methane is consumed anaerobically at the expense of sulfate. Here, we show that extractable archaeal rRNA, selecting only for active community members in these ecosystems, is dominated by sequences of uncultivated Archaea affiliated with the Marine Benthic Group B and the Miscellaneous Crenarchaeotal Group, whereas known methanotrophic Archaea are not detectable. Carbon flow reconstructions based on stable isotopic compositions of whole archaeal cells, intact archaeal membrane lipids, and other sedimentary carbon pools indicate that these Archaea assimilate sedimentary organic compounds other than methane even though methanotrophy accounts for a major fraction of carbon cycled in these ecosystems. Oxidation of methane by members of Marine Benthic Group B and the Miscellaneous Crenarchaeotal Group without assimilation of methane–carbon provides a plausible explanation. Maintenance energies of these subsurface communities appear to be orders of magnitude lower than minimum values known from laboratory observations, and ecosystem-level carbon budgets suggest that community turnover times are on the order of 100–2,000 years. Our study provides clues about the metabolic functionality of two cosmopolitan groups of uncultured Archaea.

685 citations


Journal ArticleDOI
19 Oct 2006-Nature
TL;DR: It is found that the upward flow of sulphate- and oxygen-free mud volcano fluids restricts the availability of these electron acceptors for methane oxidation, and hence the habitat range of methanotrophs, which limits the capacity of the microbial methane filter at active marine mud volcanoes to <40% of the total flux.
Abstract: Mud volcanism is an important natural source of the greenhouse gas methane to the hydrosphere and atmosphere. Recent investigations show that the number of active submarine mud volcanoes might be much higher than anticipated (for example, see refs 3-5), and that gas emitted from deep-sea seeps might reach the upper mixed ocean. Unfortunately, global methane emission from active submarine mud volcanoes cannot be quantified because their number and gas release are unknown. It is also unclear how efficiently methane-oxidizing microorganisms remove methane. Here we investigate the methane-emitting Haakon Mosby Mud Volcano (HMMV, Barents Sea, 72 degrees N, 14 degrees 44' E; 1,250 m water depth) to provide quantitative estimates of the in situ composition, distribution and activity of methanotrophs in relation to gas emission. The HMMV hosts three key communities: aerobic methanotrophic bacteria (Methylococcales), anaerobic methanotrophic archaea (ANME-2) thriving below siboglinid tubeworms, and a previously undescribed clade of archaea (ANME-3) associated with bacterial mats. We found that the upward flow of sulphate- and oxygen-free mud volcano fluids restricts the availability of these electron acceptors for methane oxidation, and hence the habitat range of methanotrophs. This mechanism limits the capacity of the microbial methane filter at active marine mud volcanoes to <40% of the total flux.

575 citations


Proceedings ArticleDOI
01 Oct 2006
TL;DR: A new transmission approach, called spatial modulation, is presented that entirely avoids ICI and requires no synchronization between the transmitting antennas while maintaining high spectral efficiency and results in a vast reduction in receiver complexity.
Abstract: The multiplexing gain of multiple antenna transmission strongly depends on transmit and receive antenna spacing, transmit antenna synchronization, and the algorithm used to eliminate interchannel interference (ICI) at the receiver. In this paper, a new transmission approach, called spatial modulation, that entirely avoids ICI and requires no synchronization between the transmitting antennas while maintaining high spectral efficiency is presented. A block of information bits is mapped into a constellation point in the signal and the spatial domain, i.e. into the location of a particular antenna. The receiver estimates the transmitted signal and the transmit antenna number and uses the two information to de-map the block of information bits. For this purpose, a novel transmit antenna number detection algorithm called iterative-maximum ratio combining (i-MRC) is presented. Spatial modulation is used to transmit different number of information bits and i-MRC is used to estimate both the transmitted signal and the transmit antenna number. The results are compared to ideal V-BLAST (vertical-Bell Lab layered space-time) and to MRC. Spatial modulation outperforms MRC. The (bit-error-ratio) BER performance and the achieved spectral efficiency is comparable to V-BLAST. However, spatial modulation results in a vast reduction in receiver complexity.

567 citations


Journal ArticleDOI

559 citations


Journal ArticleDOI
TL;DR: An overview of fundamental experimental and theoretical aspects of soot measurements by laser-induced incandescence (LII) is provided in this paper. But despite the widespread application of LII for soot-concentration and particle-size measurements, there is still a significant lack in fundamental understanding for many of the underlying physical processes.
Abstract: This paper provides an overview of a workshop focused on fundamental experimental and theoretical aspects of soot measurements by laser-induced incandescence (LII). This workshop was held in Duisburg, Germany in September 2005. The goal of the workshop was to review the current understanding of the technique and identify gaps in this understanding associated with experimental implementation, model descriptions, and signal interpretation. The results of this workshop suggest that uncertainties in the understanding of this technique are sufficient to lead to large variability among model predictions from different LII models, among measurements using different experimental approaches, and between modeled and measured signals, even under well-defined conditions. This article summarizes the content and conclusions of the workshop, discusses controversial topics and areas of disagreement identified during the workshop, and highlights recent important references related to these topics. It clearly demonstrates that despite the widespread application of LII for soot-concentration and particle-size measurements there is still a significant lack in fundamental understanding for many of the underlying physical processes.

473 citations



Journal ArticleDOI
TL;DR: In this article, a revised version of the Bully/Victim Questionnaire was given to 2,086 fifth-tenth grader students from schools in two German federal states.
Abstract: A revised version of the Bully/Victim Questionnaire [Olweus, 1991] was given to 2,086 fifth-tenth grader students from schools in two German federal states. The results were analysed in terms of frequencies of self-reports of different forms of bullying (physical, verbal, relational/indirect; for bullies and for victims), gender and grade differences. Overall, 12.1% of the students reported bullying others and 11.1% reported being bullied (victimisation). We classified 2.3% of the students as bully/victims due to their self-report. Significantly more boys reported bullying others, regardless of bullying form, and significantly more boys than girls were classified as bully/victims. Although there was no gender difference for victimisation at all, boys reported significantly more often than girls being bullied physically. Besides, self-reports of pure and overlapping forms of bullying behaviour (relational, verbal, physical) were analysed. With regard to age trends, students from middle grades reported the highest rates of bullying. Self-reported rates of victimisation were higher for younger students, regardless of form of victimisation. Furthermore, class size was not linked to reports of bullying and victimisation. Results from logistic regression analyses emphasised that the variables "gender" and "grade" add significantly to the prediction of self-reported bullying; "grade" and variables measuring impaired psychosocial "well-being" of students at school (e.g., feeling of not being popular, negative attitude towards breaks) add significantly to the prediction of self-reported victimisation. The results are discussed against the background of other study findings, accentuating the significance of gender- and age-specific forms of bullying/victimisation. Language: en

434 citations


Journal ArticleDOI
01 Mar 2006-Ecology
TL;DR: The ability of the Lincolnshire models to predict patch occupancy in Vlaams-Brabant was worse for slow than for fast species, indicating that more than a century after forest fragmentation reached its current level an extinction debt persists for species with low rates of population turnover.
Abstract: Following habitat fragmentation individual habitat patches may lose species over time as they pay off their ''extinction debt.'' Species with relatively low rates of population extinction and colonization (''slow'' species) may maintain extinction debts for particularly prolonged periods, but few data are available to test this prediction. We analyzed two unusually detailed data sets on forest plant distributions and land-use history from Lincolnshire, United Kingdom, and Vlaams-Brabant, Belgium, to test for an extinction debt in relation to species-specific extinction and colonization rates. Logistic regression models predicting the presence-absence of 36 plant species were first parameterized using data from Lincolnshire, where forest cover has been relatively low (;5-8%) for the past 1000 years. Consistent with extinction debt theory, for relatively slow species (but not fast species) these models systematically underpredicted levels of patch occupancy in Vlaams- Brabant, where forest cover was reduced from ;25% to ,10% between 1775 and 1900 (it is presently 6.5%). As a consequence, the ability of the Lincolnshire models to predict patch occupancy in Vlaams-Brabant was worse for slow than for fast species. Thus, more than a century after forest fragmentation reached its current level an extinction debt persists for species with low rates of population turnover.

424 citations


Journal ArticleDOI
TL;DR: In this paper, the authors present an overview of the current state of the art in modeling and simulation of grinding processes: physical process models (analytical and numerical models) and empirical process models(regression analysis, artificial neural net models) as well as rule based models (rule based models) are taken into account.

Journal ArticleDOI
TL;DR: Problem-focused and emotion-focused coping were negatively related to emotional and behavioral problems, whereas perceived stress and maladaptive coping was positively associated with adjustment problems.

Journal ArticleDOI
TL;DR: Evidence for the common origin of all placodes from a common panplacodal primordium around the neural plate is synthesized and new models of generic placode induction and of combinatorial placode specification are presented.

Posted Content
TL;DR: This article argued that the fragmentation of global law is not simply about legal norm collisions or policyconflicts, but rather has its origin in contradictions between society-wide institutionalized rationalities, which law cannot solve, but which demand a new legal approach to colliding norms.
Abstract: Global legal pluralism is not simply a result of political pluralism, but is instead the expression of deep contradictions between colliding sectors of a global society. At core, the fragmentation of global law is not simply about legal norm collisions or policyconflicts, but rather has its origin in contradictions between society-wide institutionalized rationalities, which law cannot solve, but which demand a new legal approach to colliding norms. This thesis will be evolved with three arguments: (1) The fragmentation of global law is more radical than any single reductionist perspective - legal, political, economic or cultural - can comprehend. Legal fragmentation is merely an ephemeral reflection of a more fundamental, multidimensional fragmentation of global society itself. (2) Any aspirations to a normative unity of global law are thus doomed from the outset. A meta-level at which conflicts might be solved is wholly elusive both in global law and in global society. Instead, we might expect intensified legal fragmentation. (3) Legal fragmentation cannot itself be combated. At the best, a weak normative compatibility of the fragments might be achieved. However, this is dependent upon the ability of conflicts law to establish a specific network logic, which can effect a loose coupling of colliding units.

Journal ArticleDOI
TL;DR: In this article, two of the most productive marine calcifying species, the coccolithophores Coccolithus pelagicus and Calcidiscus leptoporus, do not follow the CO2-related calcification response previously found.
Abstract: Uptake of half of the fossil fuel CO2 into the ocean causes gradual seawater acidification. This has been shown to slow down calcification of major calcifying groups, such as corals, foraminifera, and coccolithophores. Here we show that two of the most productive marine calcifying species, the coccolithophores Coccolithus pelagicus and Calcidiscus leptoporus, do not follow the CO2-related calcification response previously found. In batch culture experiments, particulate inorganic carbon (PIC) of C. leptoporus changes with increasing CO2 concentration in a nonlinear relationship. A PIC optimum curve is obtained, with a maximum value at present-day surface ocean pCO2 levels (∼360 ppm CO2). With particulate organic carbon (POC) remaining constant over the range of CO2 concentrations, the PIC/POC ratio also shows an optimum curve. In the C. pelagicus cultures, neither PIC nor POC changes significantly over the CO2 range tested, yielding a stable PIC/POC ratio. Since growth rate in both species did not change with pCO2, POC and PIC production show the same pattern as POC and PIC. The two investigated species respond differently to changes in the seawater carbonate chemistry, highlighting the need to consider species-specific effects when evaluating whole ecosystem responses. Changes of calcification rate (PIC production) were highly correlated to changes in coccolith morphology. Since our experimental results suggest altered coccolith morphology (at least in the case of C. leptoporus) in the geological past, coccoliths originating from sedimentary records of periods with different CO2 levels were analyzed. Analysis of sediment samples was performed on six cores obtained from locations well above the lysocline and covering a range of latitudes throughout the Atlantic Ocean. Scanning electron micrograph analysis of coccolith morphologies did not reveal any evidence for significant numbers of incomplete or malformed coccoliths of C. pelagicus and C. leptoporus in last glacial maximum and Holocene sediments. The discrepancy between experimental and geological results might be explained by adaptation to changing carbonate chemistry.

Journal ArticleDOI
TL;DR: Bach et al. as discussed by the authors proposed that low-fluid-flux serpentinization of olivine to serpentine and ferroan brucite is followed by later stages of serpentinisation under more open-system conditions and formation of magnetite by the breakdown of ferro-an Brucite.
Abstract: [1] The results of detailed textural, mineral chemical, and petrophysical studies shed new light on the poorly constrained fluid-rock reaction pathways during retrograde serpentinization at mid-ocean ridges. Uniformly depleted harzburgites and dunites from the Mid-Atlantic Ridge at 15� N show variable extents of static serpentinization. They reveal a simple sequence of reactions: serpentinization of olivine and development of a typical mesh texture with serpentine-brucite mesh rims, followed by replacement of olivine mesh centers by serpentine and brucite. The serpentine mesh rims on relic olivine are devoid of magnetite. Conversely, domains in the rock that are completely serpentinized show abundant magnetite. We propose that low-fluid-flux serpentinization of olivine to serpentine and ferroan brucite is followed by later stages of serpentinization under more open-system conditions and formation of magnetite by the breakdown of ferroan brucite. Modeling of this sequence of reactions can account for covariations in magnetic susceptibility and grain density of the rocks. Citation: Bach, W., H. Paulick, C. J. Garrido, B. Ildefonse, W. P. Meurer, and S. E. Humphris (2006), Unraveling the sequence of serpentinization reactions: petrography, mineral chemistry, and petrophysics of serpentinites from MAR 15� N (ODP Leg 209, Site 1274), Geophys. Res. Lett., 33, L13306,

Proceedings ArticleDOI
05 Jul 2006
TL;DR: It is demonstrated theoretically and by means of an experimental system that the high peak-to-average ratio in OFDM can be exploited constructively in visible light communication to intensity modulate LEDs.
Abstract: In this paper wireless communication using white, high brightness LEDs (light emitting diodes) is considered. In particular, the use of OFDM (orthogonal frequency division multiplexing) for intensity modulation is investigated. The high peak-to-average ratio (PAR) in OFDM is usually considered a disadvantage in radio frequency transmission systems due to non-linearities of the power amplifier. It is demonstrated theoretically and by means of an experimental system that the high PAR in OFDM can be exploited constructively in visible light communication to intensity modulate LEDs. It is shown that the theoretical and the experimental results match very closely, and that it is possible to cover a distance of up to one meter using a single LED.

Proceedings ArticleDOI
23 Oct 2006
TL;DR: This paper describes how to make use of suffix trees to find clones in abstract syntax trees and empirically compares the new technique to other techniques using the Bellon benchmark for clone detectors.
Abstract: Reusing software through copying and pasting is a continuous plague in software development despite the fact that it creates serious maintenance problems. Various techniques have been proposed to find duplicated redundant code (also known as software clones). A recent study has compared these techniques and shown that token-based clone detection based on suffix trees is extremely fast but yields clone candidates that are often no syntactic units. Current techniques based on abstract syntax trees--on the other hand--find syntactic clones but are considerably less efficient. This paper describes how we can make use of suffix trees to find clones in abstract syntax trees. This new approach is able to find syntactic clones in linear time and space. The paper reports the results of several large case studies in which we empirically compare the new technique to other techniques using the Bellon benchmark for clone detectors.

Journal ArticleDOI
TL;DR: The curves indicate that the protrusive force generation is a complex multiphase process involving actin and adhesion dynamics, not consistent with current theoretical models for the actin polymerization force.
Abstract: There has been a great deal of interest in the mechanism of lamellipodial protrusion (Pollard, T., and G. Borisy. 2003. Cell. 112:453–465). However, one of this mechanism's endpoints, the force of protrusion, has never been directly measured. We place an atomic force microscopy cantilever in the path of a migrating keratocyte. The deflection of the cantilever, which occurs over a period of ∼10 s, provides a direct measure of the force exerted by the lamellipodial leading edge. Stall forces are consistent with ∼100 polymerizing actin filaments per micrometer of the leading edge, each working as an elastic Brownian ratchet and generating a force of several piconewtons. However, the force-velocity curves obtained from this measurement, in which velocity drops sharply under very small loads, is not sensitive to low loading forces, and finally stalls rapidly at large loads, are not consistent with current theoretical models for the actin polymerization force. Rather, the curves indicate that the protrusive force generation is a complex multiphase process involving actin and adhesion dynamics.

Journal ArticleDOI
TL;DR: In this article, a field-based calibration of surface seawater C37 unsaturation (UK′37) measurements is presented to estimate alkenone production temperature over the diversity of modern-day oceanic environments and alkenones-synthesizing populations.
Abstract: In this paper, we compile the current surface seawater C37 alkenone unsaturation (UK′37) measurements (n = 629, −1 to 30°C temperature range) to derive a global, field-based calibration of UK′37 with alkenone production temperature. A single nonlinear “global” surface water calibration of UK′37 accurately predicts alkenone production temperatures over the diversity of modern-day oceanic environments and alkenone-synthesizing populations (T = −0.957 + 54.293(UK′37) − 52.894(UK′37)2 + 28.321(UK′37)3, r2 = 0.97, n = 567). The mean standard error of estimation is 1.2°C with insignificant bias in estimated production temperature among the different ocean regions sampled. An exception to these trends is regions characterized by strong lateral advection and extreme productivity and temperature gradients (e.g., the Brazil-Malvinas Confluence). In contrast to the surface water data, the calibration of UK′37 in surface sediments with overlying annual mean sea surface temperature (AnnO) is best fit by a linear model (AnnO = 29.876(UK′37) − 1.334, r2 = 0.97, n = 592). The standard error of estimation (1.1°C) is similar to that of the surface water production calibration, but a higher degree of bias is observed among the regional data sets. The sediment calibration differs significantly from the surface water calibration. UK′37 in surface sediments is consistently higher than that predicted from AnnO and the surface water production temperature calibration, and the magnitude of the offset increases as the surface water AnnO decreases. We apply the global production temperature calibration to the coretop UK′37 data to estimate the coretop alkenone integrated production temperature (coretop IPT) and compare this with the overlying annual mean sea surface temperature (AnnO). We use simple models to explore the possible causes of the deviation observed between the coretop temperature signal, as estimated by UK′37, and AnnO. Our results indicate that the deviation can best be explained if seasonality in production and/or thermocline production as well as differential degradation of 37:3 and 37:2 alkenones both affect the sedimentary alkenone signal.

Journal ArticleDOI
TL;DR: It is concluded that the model of concentration addition may be useful to estimate the EC50 values of ionic liquids that have not been tested or even synthesised yet, and seems to be the key structural features leading to the observed anion cytotoxicity.

Journal ArticleDOI
TL;DR: In vivo interobserver and interscan studies on low-dose data from eight clinical metastasis patients revealed that clinically significant volume change can be detected reliably and with negligible computation time by the presented methods.
Abstract: Volumetric growth assessment of pulmonary lesions is crucial to both lung cancer screening and oncological therapy monitoring. While several methods for small pulmonary nodules have previously been presented, the segmentation of larger tumors that appear frequently in oncological patients and are more likely to be complexly interconnected with lung morphology has not yet received much attention. We present a fast, automated segmentation method that is based on morphological processing and is suitable for both small and large lesions. In addition, the proposed approach addresses clinical challenges to volume assessment such as variations in imaging protocol or inspiration state by introducing a method of segmentation-based partial volume analysis (SPVA) that follows on the segmentation procedure. Accuracy and reproducibility studies were performed to evaluate the new algorithms. In vivo interobserver and interscan studies on low-dose data from eight clinical metastasis patients revealed that clinically significant volume change can be detected reliably and with negligible computation time by the presented methods. In addition, phantom studies were conducted. Based on the segmentation performed with the proposed method, the performance of the SPVA volumetry method was compared with the conventional technique on a phantom that was scanned with different dosages and reconstructed with varying parameters. Both systematic and absolute errors were shown to be reduced substantially by the SPVA method. The method was especially successful in accounting for slice thickness and reconstruction kernel variations, where the median error was more than halved in comparison to the conventional approach.

Journal ArticleDOI
TL;DR: Wittrock et al. as mentioned in this paper presented the first global simultaneous observations of glyoxal (CHOCHO) and formaldehyde (HCHO) columns retrieved from measurements by the Scanning Imaging Absorption Spectrometer for Atmospheric Cartography (SCIAMACHY) satellite instrument.
Abstract: [1] The first global simultaneous observations of glyoxal (CHOCHO) and formaldehyde (HCHO) columns retrieved from measurements by the Scanning Imaging Absorption Spectrometer for Atmospheric Cartography (SCIAMACHY) satellite instrument are presented and compared to model calculations. The global pattern of the distribution of CHOCHO is similar to that of HCHO. High values are observed over areas with large biogenic isoprene emissions (Central Africa, parts of South America, and Indonesia). Also regions with biomass burning and anthropogenic pollution exhibit elevated levels of CHOCHO. The ratio of the columns of CHOCHO to HCHO is generally of the order of 0.05 in regions having biogenic emissions, which is in reasonable agreement with the current understanding of the oxidation of hydrocarbons emitted by the biosphere. However and in contrast to our model, high values of both HCHO and CHOCHO are also observed over areas of the tropical oceans. This is tentatively attributed to outflow from the continents and local oceanic biogenic sources of the precursors of HCHO and CHOCHO. Citation: Wittrock, F., A. Richter, H. Oetjen, J. P. Burrows, M. Kanakidou, S. Myriokefalitakis, R. Volkamer, S. Beirle, U. Platt, and T. Wagner (2006), Simultaneous global observations of glyoxal and formaldehyde from space, Geophys. Res. Lett., 33, L16804, doi:10.1029/2006GL026310.

Journal ArticleDOI
TL;DR: The article discusses the challenge of providing interactivity within journalism, and an exploratory content analysis of 100 U.S. online newspapers reveals that many provide only token interactive options.
Abstract: The article discusses the challenge of providing interactivity within journalism. It views interactivity as a variable of responsiveness in interpersonal and societal communication. The Internet has the potential to increase interactive attempts in journalism. However, media organizations do not necessarily exploit this opportunity effectively. An exploratory content analysis of 100 U.S. online newspapers reveals that many provide only token interactive options.

Journal ArticleDOI
TL;DR: In this paper, the authors investigated the impact of glacial refugia and migration pathways on the modern genetic diversity of Pinus sylvestris in Europe and found that the long-term isolation in the glacial flocus and the migrational process during the Holocene have played a major role in shaping the modern diversity of P sylvesterris in European regions.
Abstract: Aim To understand the impact of glacial refugia and migration pathways on the modern genetic diversity of Pinus sylvestris Location The study was carried out throughout Europe Methods An extended set of data of pollen and macrofossil remains was used to locate the glacial refugia and reconstruct the migrating routes of P sylvestris throughout Europe A vegetation model was used to simulate the extent of the potential refugia during the last glacial period At the same time a genetic survey was carried out on this species Results The simulated distribution of P sylvestris during the last glacial period is coherent with the observed fossil data, which showed a patchy distribution of the refugia between c 40 degrees N and 50 degrees N Several migrational fronts were detected within the Iberian and the Italian peninsulas, and outside the Hungarian plain and around the Alps The modern mitochondrial DNA depicted three different haplotypes for P sylvestris Two distinct haplotypes were restricted to northern Spain and Italy, and the third haplotype dominated most of the present-day remaining distribution range of P sylvestris in Europe Main concluions During the last glacial period P sylvestris was constrained under severe climatic conditions to survive in scattered and restricted refugial areas Combining palaeoenvironmental data, vegetation modelling and the genetic data, we have shown that the long-term isolation in the glacial refugia and the migrational process during the Holocene have played a major role in shaping the modern genetic diversity of P sylvestris in Europe Document Type: Article

Journal ArticleDOI
TL;DR: In this paper, the authors used a simple T-shaped micro-mixer with rectangular cross-sections and very smooth surfaces (reactive ion etching) to enable a good approximation by numerical models.

Journal ArticleDOI
TL;DR: Genome comparison with the Azoarcus-related soil bacterium strain EbN1 revealed a surprisingly low degree of synteny, indicating a low rate of recent gene transfer that is presumably due to adaptation to a stable, low-stress microenvironment.
Abstract: Azoarcus sp. strain BH72, a mutualistic endophyte of rice and other grasses, is of agrobiotechnological interest because it supplies biologically fixed nitrogen to its host and colonizes plants in remarkably high numbers without eliciting disease symptoms. The complete genome sequence is 4,376,040-bp long and contains 3,992 predicted protein-coding sequences. Genome comparison with the Azoarcus-related soil bacterium strain EbN1 revealed a surprisingly low degree of synteny. Coding sequences involved in the synthesis of surface components potentially important for plant-microbe interactions were more closely related to those of plant-associated bacteria. Strain BH72 appears to be 'disarmed' compared to plant pathogens, having only a few enzymes that degrade plant cell walls; it lacks type III and IV secretion systems, related toxins and an N-acyl homoserine lactones-based communication system. The genome contains remarkably few mobile elements, indicating a low rate of recent gene transfer that is presumably due to adaptation to a stable, low-stress microenvironment.

Journal ArticleDOI
21 Aug 2006
TL;DR: A concrete approach to multirobot mapping is presented in form of a special similarity metric and a stochastic search algorithm that guides the search algorithm toward optimal solutions.
Abstract: Mapping can potentially be speeded up in a significant way by using multiple robots exploring different parts of the environment. But the core question of multirobot mapping is how to integrate the data of the different robots into a single global map. A significant amount of research exists in the area of multirobot mapping that deals with techniques to estimate the relative robots poses at the start or during the mapping process. With map merging, the robots in contrast individually build local maps without any knowledge about their relative positions. The goal is then to identify regions of overlap at which the local maps can be joined together. A concrete approach to this idea is presented in form of a special similarity metric and a stochastic search algorithm. Given two maps m and m', the search algorithm transforms m' by rotations and translations to find a maximum overlap between m and m'. In doing so, the heuristic similarity metric guides the search algorithm toward optimal solutions. Results from experiments with up to six robots are presented based on simulated as well as real-world map data

Journal ArticleDOI
TL;DR: The view that CA provides a precautious but not overprotective approach to the predictive hazard assessment of pesticide mixtures under realistic exposure scenarios, irrespective of the similarity or dissimilarity of their mechanisms of action is supported.

Journal ArticleDOI
TL;DR: In this paper, a new retrieval algorithm for the determination of aerosol properties using Multi-AXis Differential Optical Absorption Spectroscopy (MAX-DOAS) measurements based on nonlinear optimal estimation is presented.
Abstract: [1] A new retrieval algorithm for the determination of aerosol properties using Multi-AXis Differential Optical Absorption Spectroscopy (MAX-DOAS) measurements based on nonlinear optimal estimation is presented. Using simulated MAX-DOAS measurements of the optical depth of the collision complex of oxygen (O4) as well as the variation of the intensity of diffuse skylight measured at different viewing directions and wavelengths, the capability of this measurement technique to derive the aerosol extinction profile as well as information on the phase function and single scattering albedo is demonstrated. The information content, vertical resolution and retrieval errors under various atmospheric conditions are discussed. Furthermore, it is demonstrated that the assumption of a smooth variation of the aerosol properties between successive measurements can be used to improve the quality of the retrieval by applying a Kalman smoother. The results of these model studies suggest that the achievable precision of MAX-DOAS measurements of the aerosol total optical depth is better than 0.01 and thus comparable with established methods of aerosol detection by Sun photometers (e.g., within the AERONET network) over a wide range of atmospheric conditions. Moreover, MAX-DOAS measurements contain information on the vertical profile of the aerosol extinction, and can be performed with relatively simple, robust and self-calibrating instruments.