Institution
University of California, Santa Cruz
Education•Santa Cruz, California, United States•
About: University of California, Santa Cruz is a education organization based out in Santa Cruz, California, United States. It is known for research contribution in the topics: Galaxy & Population. The organization has 15541 authors who have published 44120 publications receiving 2759983 citations. The organization is also known as: UCSC & UC, Santa Cruz.
Topics: Galaxy, Population, Star formation, Redshift, Planet
Papers published on a yearly basis
Papers
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TL;DR: The authors aim to clarify the methods of determining fish movement based on natural and artificial otolith chemical tags and review current trends in determining movement using otolith chemistry, otolith sampling methods, and what influences otolith Chemistry.
Abstract: in ever-increasing numbers, researchers wish to extract information based on chemi - cal analyses from otoliths to determine movements and life-history patterns of fish. such analyses make assumptions about chemical incorporation and interpretation that are beyond those that are important for stock discrimination studies, another common application. The authors aim to clarify the methods of determining fish movement based on natural and artificial otolith chemical tags and review current trends in determining movement using otolith chemistry, otolith sampling methods, and what influences otolith chemistry. both spatial and temporal variability in water and otolith chemistries, which underpin the assumptions of several methods, are discussed. Five methods for determining movement and migration of fish are outlined: (1) estimates of movement and life-history traits of a single fish group, (2) assessing connectivity among groups using natural chemical tags in otoliths, (3) transgenerational marks to determine parentage and natal origins, (4) profile analysis to define life-history variation within a population and (5) profile analysis to describe movements through different environments. Within each of these methods, background information, specific hypotheses being tested and assumptions and limitations of each technique are provided. Finally,
557 citations
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TL;DR: Challenges inherent in the control of vector-borne zoonotic diseases and some emerging non-traditional strategies that could be effective in the long term are described.
556 citations
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TL;DR: Direct measurements of 15N2 fixation by small diazotrophs in various parts of the Pacific Ocean, including the waters off Hawaii where the unicellular diazOTrophs were first characterized, show that N1 fixation by unicells can support a significant fraction of total new production in oligotrophic waters.
Abstract: The availability of nitrogen is important in regulating biological productivity in marine environments. Deepwater nitrate has long been considered the major source of new nitrogen supporting primary production in oligotrophic regions of the open ocean, but recent studies have showed that biological N2 fixation has a critical role in supporting oceanic new production. Large colonial cyanobacteria in the genus Trichodesmium and the heterocystous endosymbiont Richelia have traditionally been considered the dominant marine N2 fixers, but unicellular diazotrophic cyanobacteria and bacterioplankton have recently been found in the picoplankton and nanoplankton community of the North Pacific central gyre, and a variety of molecular and isotopic evidence suggests that these unicells could make a major contribution to the oceanic N budget. Here we report rates of N2 fixation by these small, previously overlooked diazotrophs that, although spatially variable, can equal or exceed the rate of N2 fixation reported for larger, more obvious organisms. Direct measurements of 15N2 fixation by small diazotrophs in various parts of the Pacific Ocean, including the waters off Hawaii where the unicellular diazotrophs were first characterized, show that N2 fixation by unicellular diazotrophs can support a significant fraction of total new production in oligotrophic waters.
556 citations
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Washington University in St. Louis1, Human Genome Sequencing Center2, University of Oxford3, Wellcome Trust Centre for Human Genetics4, University of Washington5, Pompeu Fabra University6, Howard Hughes Medical Institute7, Wellcome Trust Sanger Institute8, European Bioinformatics Institute9, University of California, Santa Cruz10, University of Illinois at Urbana–Champaign11, Pennsylvania State University12, University of Porto13, Universidade Nova de Lisboa14, University of Bari15, University of Bologna16, Louisiana State University17, Institute for Systems Biology18, Indiana University19, University of Oviedo20, Comenius University in Bratislava21, Cornell University22, Columbia University23, Stanford University24, University of Arizona25, Aarhus University26, Children's Hospital Oakland Research Institute27
TL;DR: The orang-utan species, Pongo abelii and Pongo pygmaeus, are the most phylogenetically distant great apes from humans, thereby providing an informative perspective on hominid evolution and a primate polymorphic neocentromere, found in both Pongo species are described.
Abstract: 'Orang-utan' is derived from a Malay term meaning 'man of the forest' and aptly describes the southeast Asian great apes native to Sumatra and Borneo. The orang-utan species, Pongo abelii (Sumatran) and Pongo pygmaeus (Bornean), are the most phylogenetically distant great apes from humans, thereby providing an informative perspective on hominid evolution. Here we present a Sumatran orang-utan draft genome assembly and short read sequence data from five Sumatran and five Bornean orang-utan genomes. Our analyses reveal that, compared to other primates, the orang-utan genome has many unique features. Structural evolution of the orang-utan genome has proceeded much more slowly than other great apes, evidenced by fewer rearrangements, less segmental duplication, a lower rate of gene family turnover and surprisingly quiescent Alu repeats, which have played a major role in restructuring other primate genomes. We also describe a primate polymorphic neocentromere, found in both Pongo species, emphasizing the gradual evolution of orang-utan genome structure. Orang-utans have extremely low energy usage for a eutherian mammal, far lower than their hominid relatives. Adding their genome to the repertoire of sequenced primates illuminates new signals of positive selection in several pathways including glycolipid metabolism. From the population perspective, both Pongo species are deeply diverse; however, Sumatran individuals possess greater diversity than their Bornean counterparts, and more species-specific variation. Our estimate of Bornean/Sumatran speciation time, 400,000 years ago, is more recent than most previous studies and underscores the complexity of the orang-utan speciation process. Despite a smaller modern census population size, the Sumatran effective population size (N(e)) expanded exponentially relative to the ancestral N(e) after the split, while Bornean N(e) declined over the same period. Overall, the resources and analyses presented here offer new opportunities in evolutionary genomics, insights into hominid biology, and an extensive database of variation for conservation efforts.
555 citations
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Kavli Institute for Theoretical Physics1, Trieste Astronomical Observatory2, Max Planck Society3, University of California, Santa Cruz4, Institute for Advanced Study5, Marshall Space Flight Center6, University of California, Berkeley7, University of Copenhagen8, University of Tokyo9, European Southern Observatory10, University of Chile11, University of Hertfordshire12, University of Leicester13, University of Amsterdam14, Lawrence Berkeley National Laboratory15, Chinese Academy of Sciences16, Spanish National Research Council17, University of Victoria18, University of Ferrara19, Space Telescope Science Institute20, Hiroshima University21, Florida State University College of Arts and Sciences22
TL;DR: The data, combined with radio and X-ray observations, suggest that XRF 060218 is an intrinsically weak and soft event, rather than a classical GRB observed off-axis, which extends the GRB–supernova connection to X-rays flashes and fainter supernovae, implying a common origin.
Abstract: Long-duration gamma-ray bursts (GRBs) are associated with type Ic supernovae(1) that are more luminous than average(2-5) and that eject material at very high velocities. Less-luminous supernovae were not hitherto known to be associated with GRBs, and therefore GRB - supernovae were thought to be rare events(6). Whether X-ray flashes - analogues of GRBs, but with lower luminosities and fewer gamma-rays - can also be associated with supernovae, and whether they are intrinsically 'weak' events or typical GRBs viewed off the axis of the burst(7), is unclear. Here we report the optical discovery and follow-up observations of the type Ic supernova SN 2006aj associated with X-ray flash XRF 060218. Supernova 2006aj is intrinsically less luminous than the GRB - supernovae, but more luminous than many supernovae not accompanied by a GRB. The ejecta velocities derived from our spectra are intermediate between these two groups, which is consistent with the weakness of both the GRB output(8) and the supernova radio flux(9). Our data, combined with radio and X-ray observations(8-10), suggest that XRF 060218 is an intrinsically weak and soft event, rather than a classical GRB observed off-axis. This extends the GRB - supernova connection to X-ray flashes and fainter supernovae, implying a common origin. Events such as XRF 060218 are probably more numerous than GRB - supernovae.
555 citations
Authors
Showing all 15733 results
Name | H-index | Papers | Citations |
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David J. Schlegel | 193 | 600 | 193972 |
David R. Williams | 178 | 2034 | 138789 |
John R. Yates | 177 | 1036 | 129029 |
David Haussler | 172 | 488 | 224960 |
Evan E. Eichler | 170 | 567 | 150409 |
Anton M. Koekemoer | 168 | 1127 | 106796 |
Mark Gerstein | 168 | 751 | 149578 |
Alexander S. Szalay | 166 | 936 | 145745 |
Charles M. Lieber | 165 | 521 | 132811 |
Jorge E. Cortes | 163 | 2784 | 124154 |
M. Razzano | 155 | 515 | 106357 |
Lars Hernquist | 148 | 598 | 88554 |
Aaron Dominguez | 147 | 1968 | 113224 |
Taeghwan Hyeon | 139 | 563 | 75814 |
Garth D. Illingworth | 137 | 505 | 61793 |