University of Colorado Boulder

About: University of Colorado Boulder is a education organization based out in Boulder, Colorado, United States. It is known for research contribution in the topics: Population & Galaxy. The organization has 48794 authors who have published 115151 publications receiving 5387328 citations. The organization is also known as: CU Boulder & UCB.

Semantic database modeling: survey, applications, and research issues

Abstract: Most common database management systems represent information in a simple record-based format. Semantic modeling provides richer data structuring capabilities for database applications. In particular, research in this area has articulated a number of constructs that provide mechanisms for representing structurally complex interrelations among data typically arising in commercial applications. In general terms, semantic modeling complements work on knowledge representation (in artificial intelligence) and on the new generation of database models based on the object-oriented paradigm of programming languages.This paper presents an in-depth discussion of semantic data modeling. It reviews the philosophical motivations of semantic models, including the need for high-level modeling abstractions and the reduction of semantic overloading of data type constructors. It then provides a tutorial introduction to the primary components of semantic models, which are the explicit representation of objects, attributes of and relationships among objects, type constructors for building complex types, ISA relationships, and derived schema components. Next, a survey of the prominent semantic models in the literature is presented. Further, since a broad area of research has developed around semantic modeling, a number of related topics based on these models are discussed, including data languages, graphical interfaces, theoretical investigations, and physical implementation strategies.

Comptonization of Diffuse Ambient Radiation by a Relativistic Jet: The Source of Gamma Rays from Blazars?

Abstract: Recent Energy Gamma Ray Experiment Telescope (EGRET) observations of blazars have revealed strong, variable gamma-ray fluxes with no signatures of gamma-ray absorption by pair production. This radiation probably originates from the inner parts of relativistic jets which are aimed nearly toward us. On sub-parsec scales, the jet will be pervaded by radiation from the broad-line region, as well as by photons from the central continuum source (some of which will be scattered by thermal plasma). In a frame moving with the relativistic outflow, the energy of this ambient radiation would be enhanced. This radiation would be Comptonized by both cold and relativistic electrons in the jet, yielding (in the observer's frame) a collimated beam of X-rays and gamma rays. On the assumption that this process dominates self-Comptonization of synchrotron radiation, we develop a self-consistent model for variable gamma-ray emission, involving a single population of relativistic electrons accelerated by a disturbance in the jet. The spectral break between the X-ray and gamma-ray band, observed in 3C 279 and deduced for other blazars, results from inefficient radiative cooling of lower energy electrons. The existence of such a break strongly favors a model involving Comptonization of an external radiation field over a synchrotron self-Compton model. We derive constraints on such model parameters as the location and speed of the source, its dimensions and internal physical parameters, the maximum photon energies produced in the source, and the density and distribution of ambient radiation. Finally, we discuss how observations might discriminate between our model and alternative ones invoking Comptonization of ambient radiation.

Plant community responses to experimental warming across the tundra biome

Abstract: Recent observations of changes in some tundra ecosystems appear to be responses to a warming climate. Several experimental studies have shown that tundra plants and ecosystems can respond strongly to environmental change, including warming; however, most studies were limited to a single location and were of short duration and based on a variety of experimental designs. In addition, comparisons among studies are difficult because a variety of techniques have been used to achieve experimental warming and different measurements have been used to assess responses. We used metaanalysis on plant community measurements from standardized warming experiments at 11 locations across the tundra biome involved in the International Tundra Experiment. The passive warming treatment increased plant-level air temperature by 1-3°C, which is in the range of predicted and observed warming for tundra regions. Responses were rapid and detected in whole plant communities after only two growing seasons. Overall, warming increased height and cover of deciduous shrubs and graminoids, decreased cover of mosses and lichens, and decreased species diversity and evenness. These results predict that warming will cause a decline in biodiversity across a wide variety of tundra, at least in the short term. They also provide rigorous experimental evidence that recently observed increases in shrub cover in many tundra regions are in response to climate warming. These changes have important implications for processes and interactions within tundra ecosystems and between tundra and the atmosphere.

Stability of protein structure and hydrophobic interaction.

Abstract: Publisher Summary This chapter focuses on the stability of protein structure and hydrophobic interaction The interest in hydrophobic interactions was stimulated by their unusual thermodynamic properties: it is believed that they are governed, not by enthalpic, but by entropic features, characterized by the undesirable entropy decrease of water in the vicinity of nonpolar groups The amount of polar groups in proteins is almost the same as the amount of nonpolar ones; and according to crystallographic studies, most of them are arranged at distances suggesting hydrogen bond formation Hydrogen bonds were invoked to various degrees of importance in explaining the stabilization of the native structure The chapter examines the main achievements of microcalorimetric studies of protein denaturation and of the dissolution of nonpolar substances in water The chapter also discusses calorimetric studies of protein denaturation The denaturational increment of the heat capacity can be partly explained by a gradual melting of the residual structure in the denatured protein on heating The large negative entropy of the transfer of a nonpolar substance to water at room temperature indicates a definite increase of the order in water in the presence of such solutes Of the two approaches to decomposing the thermodynamics for dissolution of nonpolar solutes into water, the first, from a reference point at the maximum of the free energy of transfer, leads to the concept of the compact state of the nonpolar substance

Receptor downregulation and multivesicular-body sorting

Abstract: The sorting of proteins into the inner vesicles of multivesicular bodies is required for many key cellular processes, which range from the downregulation of activated signalling receptors to the proper stimulation of the immune response. Recent advances in our understanding of the multivesicular-body sorting pathway have resulted from the identification of ubiquitin as a signal for the efficient sorting of proteins into this transport route, and from the discovery of components of the sorting and regulatory machinery that directs this complex process.