Showing papers by "University of Maine published in 2008"

A Global Map of Human Impact on Marine Ecosystems

Abstract: The management and conservation of the world's oceans require synthesis of spatial data on the distribution and intensity of human activities and the overlap of their impacts on marine ecosystems. We developed an ecosystem-specific, multiscale spatial model to synthesize 17 global data sets of anthropogenic drivers of ecological change for 20 marine ecosystems. Our analysis indicates that no area is unaffected by human influence and that a large fraction (41%) is strongly affected by multiple drivers. However, large areas of relatively little human impact remain, particularly near the poles. The analytical process and resulting maps provide flexible tools for regional and global efforts to allocate conservation resources; to implement ecosystem-based management; and to inform marine spatial planning, education, and basic research.

Three-dimensional sub-100 nm resolution fluorescence microscopy of thick samples.

Abstract: Imaging volumes as thick as whole cells at three-dimensional (3D) super-resolution is required to reveal unknown features of cellular organization. We report a light microscope that generates images with translationally invariant 30 x 30 x 75 nm resolution over a depth of several micrometers. This method, named biplane (BP) FPALM, combines a double-plane detection scheme with fluorescence photoactivation localization microscopy (FPALM) enabling 3D sub-diffraction resolution without compromising speed or sensitivity.

Human influences on rates of phenotypic change in wild animal populations.

Abstract: Human activities can expose populations to dramatic environmental perturbations, which may then precipitate adaptive phenotypic change. We ask whether or not phenotypic changes associated with human-disturbed (anthropogenic) contexts are greater than those associated with more 'natural' contexts. Our meta-analysis is based on more than 3000 rates of phenotypic change in 68 'systems', each representing a given species in a particular geographical area. We find that rates of phenotypic change are greater in anthropogenic contexts than in natural contexts. This difference may be influenced by phenotypic plasticity - because it was evident for studies of wild-caught individuals (which integrate both genetic and plastic effects) but not for common-garden or quantitative genetic studies (which minimize plastic effects). We also find that phenotypic changes in response to disturbance can be remarkably abrupt, perhaps again because of plasticity. In short, humans are an important agent driving phenotypic change in contemporary populations. Although these changes sometimes have a genetic basis, our analyses suggest a particularly important contribution from phenotypic plasticity.

Water in Nonpolar Confinement: From Nanotubes to Proteins and Beyond *

Abstract: Water molecules confined to nonpolar pores and cavities of nanoscopic dimensions exhibit highly unusual properties. Water filling is strongly cooperative, with the possible coexistence of filled and empty states and sensitivity to small perturbations of the pore polarity and solvent conditions. Confined water molecules form tightly hydrogen-bonded wires or clusters. The weak attractions to the confining wall, combined with strong interactions between water molecules, permit exceptionally rapid water flow, exceeding expectations from macroscopic hydrodynamics by several orders of magnitude. The proton mobility along 1D water wires also substantially exceeds that in the bulk. Proteins appear to exploit these unusual properties of confined water in their biological function (e.g., to ensure rapid water flow in aquaporins or to gate proton flow in proton pumps and enzymes). The unusual properties of water in nonpolar confinement are also relevant to the design of novel nanofluidic and molecular separation devices or fuel cells.

Carbon-based primary productivity modeling with vertically resolved photoacclimation

Abstract: [1] Net primary production (NPP) is commonly modeled as a function of chlorophyll concentration (Chl), even though it has been long recognized that variability in intracellular chlorophyll content from light acclimation and nutrient stress confounds the relationship between Chl and phytoplankton biomass. It was suggested previously that satellite estimates of backscattering can be related to phytoplankton carbon biomass (C) under conditions of a conserved particle size distribution or a relatively stable relationship between C and total particulate organic carbon. Together, C and Chl can be used to describe physiological state (through variations in Chl:C ratios) and NPP. Here, we fully develop the carbon-based productivity model (CbPM) to include information on the subsurface light field and nitracline depths to parameterize photoacclimation and nutrient stress throughout the water column. This depth-resolved approach produces profiles of biological properties (Chl, C, NPP) that are broadly consistent with observations. The CbPM is validated using regional in situ data sets of irradiance-derived products, phytoplankton chlorophyll:carbon ratios, and measured NPP rates. CbPM-based distributions of global NPP are significantly different in both space and time from previous Chl-based estimates because of the distinction between biomass and physiological influences on global Chl fields. The new model yields annual, areally integrated water column production of ∼52 Pg C a−1 for the global oceans.

Coral reef management and conservation in light of rapidly evolving ecological paradigms

Abstract: The decline of many coral reef ecosystems in recent decades surprised experienced managers and researchers. It shattered old paradigms that these diverse ecosystems are spatially uniform and temporally stable on the scale of millennia. We now see reefs as heterogeneous, fragile, globally stressed ecosystems structured by strong positive or negative feedback processes. We review the causes and consequences of reef decline and ask whether management practices are addressing the problem at appropriate scales. We conclude that both science and management are currently failing to address the comanagement of extractive activities and ecological processes that drive ecosystems (e.g. productivity and herbivory). Most reef conservation efforts are directed toward reserve implementation, but new approaches are needed to sustain ecosystem function in exploited areas.

Ground‐based measurements of spatial and temporal variability of snow accumulation in East Antarctica

Abstract: The East Antarctic Ice Sheet is the largest, highest, coldest, driest, and windiest ice sheet on Earth. Understanding of the surface mass balance (SMB) of Antarctica is necessary to determine the present state of the ice sheet, to make predictions of its potential contribution to sea level rise, and to determine its past history for paleoclimatic reconstructions. However, SMB values are poorly known because of logistic constraints in extreme polar environments, and they represent one of the biggest challenges of Antarctic science. Snow accumulation is the most important parameter for the SMB of ice sheets. SMB varies on a number of scales, from small-scale features (sastrugi) to ice-sheet-scale SMB patterns determined mainly by temperature, elevation, distance from the coast, and wind-driven processes. In situ measurements of SMB are performed at single points by stakes, ultrasonic sounders, snow pits, and firn and ice cores and laterally by continuous measurements using ground-penetrating radar. SMB for large regions can only be achieved practically by using remote sensing and/or numerical climate modeling. However, these techniques rely on ground truthing to improve the resolution and accuracy. The separation of spatial and temporal variations of SMB in transient regimes is necessary for accurate interpretation of ice core records. In this review we provide an overview of the various measurement techniques, related difficulties, and limitations of data interpretation; describe spatial characteristics of East Antarctic SMB and issues related to the spatial and temporal representativity of measurements; and provide recommendations on how to perform in situ measurements.

Adhesion and Surface Issues in Cellulose and Nanocellulose

Abstract: This paper provides a review of the scientific literature concerned with adhesion and surface properties of cellulose and nanocellulose. Cellulose is the most abundant chemical compound on earth and its natural affinity for self-adhesion has long been recognized. The ease of adhesion that occurs in cellulose has contributed to its use in paper and other fiber-based composite materials. Cellulose adhesion, which has received considerable attention over the past half century, occurs over a practical length scale ranging from the nanoscale to millimeters. Adhesion theories that have been examined in the bonding of cellulose fibers include: mechanical interlocking, adsorption or wetting theory, diffusion theory, and the theory of weak boundary layers. Cellulose fibers on the nanoscale are prepared in four different ways: (1) bacterial cellulose nanofibers, (2) cellulose nanofibers by electrospinning, (3) microfibrillated cellulose plant cell fibers and (4) nanorods or cellulose whiskers. Structure and propert...

Fitting the Mold of Graduate School: A Qualitative Study of Socialization in Doctoral Education

Abstract: Doctoral student attrition in the United States has reached alarming proportions, with reported rates of approximately 50% across disciplines (Nettles and Millett 2006). Attrition rates of underrepresented populations have been reported at higher rates across disciplines (Council of Graduate Schools 2004), pointing to a disparate experience for these students. Socialization has been shown to be a determining factor in doctoral student success and retention (Turner and Thompson 1993) while not necessarily reflecting how the socialization experience differs by disciplinary and institutional contexts. Through this qualitative study I sought to understand the effects of the socialization process upon doctoral student success and retention in the disciplines of chemistry and history at two institutions. Results highlighted a disparate experience for women, students of color, students with families, part-time students, and older students. Suggestions for policy, practice, and further research are included.

Colorado Potato Beetle Resistance to Insecticides

Abstract: The Colorado potato beetle, Leptinotarsa decemlineata (Say), is widely regarded as the most important insect defoliator of potatoes. Its current range covers about 16 million km2 in North America, Europe, and Asia and continues to expand. This insect has a complicated and diverse life history, which is well-suited to agricultural environments, and makes it a complex and challenging pest to control. Dispersal, closely connected with diapause, feeding, and reproduction, allow the Colorado potato beetle to employ “bet-hedging” reproductive strategies, distributing its offspring in both space (within and between fields) and time (within and between years). The Colorado potato beetle played a large role in creating the modern pesticide industry, with hundreds of chemicals tested against it. High selection pressure, together with natural propensity to adapt to toxic substances, eventually resulted in a large number of insecticide-resistant Colorado potato beetle populations. Since the middle of the last century, the beetle has developed resistance to 52 different compounds belonging to all major insecticide classes. Resistance levels vary greatly among different populations and between beetle life stages, but in some cases can be very high (up to 2,000-fold). Known mechanisms of Colorado potato beetle resistance to insecticides include enhanced metabolism involving esterases, carboxylesterases and monooxygenases, and target site insensitivity, as well as reduced insecticide penetration and increased excretion. There is also some evidence of behavioral resistance. Resistance mechanisms are sometimes highly diverse even within a relatively narrow geographical area. Resistance is usually inherited as an incompletely dominant or incompletely recessive trait, with one or several genes involved in its determination. Because of pleiotropic effects of resistant alleles, insecticide-resistant beetles often have reduced relative fitness in the absence of insecticides. Rotating different classes of insecticides and reducing insecticidal pressure on pest populations by provision of temporal and spatial refuges from exposure to toxins have been proposed to delay evolution of resistance. However, insecticide resistance in this insect will likely remain a major challenge to the pest control practitioners. Still limited understanding of beetle biology, its flexible life history, and grower reluctance to adopt some of the resistance management techniques create impediments to successful resistance management. Overcoming these obstacles is not an easy task, but it will be crucial for sustainable potato production.

PEGylated gold nanoparticles conjugated to monoclonal F19 antibodies as targeted labeling agents for human pancreatic carcinoma tissue.

Abstract: In this study, we describe optical detection of antibody-conjugated nanoparticles bound to surgically resected human pancreatic cancer tissue. Gold nanoparticles stabilized by heterobifunctional polyethylene glycol (PEG) were prepared using approximately 15 nm spherical gold cores and covalently coupled to F19 monoclonal antibodies. The heterobifunctional PEG ligands contain a dithiol group for stable anchoring onto the gold surface and a terminal carboxy group for coupling of antibodies to the outside of the PEG shell. The nanoparticle-antibody bioconjugates form highly stable dispersions and exhibit long-term resistance to agglomeration. This has been demonstrated by dynamic light scattering, size exclusion chromatography, and transmission electron microscopy. The nanoparticle bioconjugates were used to label tumor stroma in approximately 5 mum thick sections of resected human pancreatic adenocarcinoma. After rinsing away nonbound nanoparticles and fixation, the tissue samples were imaged by darkfield microscopy near the nanoparticle resonance scattering maximum (approximately 560 nm). The images display pronounced tissue features and suggest that this novel labeling method could provide for facile identification of cancer tissue. Tumor samples treated with gold nanoparticles conjugated to nonspecific control antibodies and noncancerous pancreatic tissue treated with mAb-F19-conjugated gold nanoparticles both exhibited correctly negative results and showed no tissue staining.

Increased flow speed on a large East Antarctic outlet glacier caused by subglacial floods

Abstract: Large ice streams and outlet glaciers drain Greenland and Antarctica. An observed acceleration of ice velocity in one of these outlet glaciers, Byrd Glacier, East Antarctica coincides with a large water discharge from two subglacial lakes, allowing direct attribution of the change in glacier dynamics to the water drainage network beneath the ice.

Horizontal gene transfer of the algal nuclear gene psbO to the photosynthetic sea slug Elysia chlorotica.

Abstract: The sea slug Elysia chlorotica acquires plastids by ingestion of its algal food source Vaucheria litorea. Organelles are sequestered in the mollusc's digestive epithelium, where they photosynthesize for months in the absence of algal nucleocytoplasm. This is perplexing because plastid metabolism depends on the nuclear genome for >90% of the needed proteins. Two possible explanations for the persistence of photosynthesis in the sea slug are (i) the ability of V. litorea plastids to retain genetic autonomy and/or (ii) more likely, the mollusc provides the essential plastid proteins. Under the latter scenario, genes supporting photosynthesis have been acquired by the animal via horizontal gene transfer and the encoded proteins are retargeted to the plastid. We sequenced the plastid genome and confirmed that it lacks the full complement of genes required for photosynthesis. In support of the second scenario, we demonstrated that a nuclear gene of oxygenic photosynthesis, psbO, is expressed in the sea slug and has integrated into the germline. The source of psbO in the sea slug is V. litorea because this sequence is identical from the predator and prey genomes. Evidence that the transferred gene has integrated into sea slug nuclear DNA comes from the finding of a highly diverged psbO 3' flanking sequence in the algal and mollusc nuclear homologues and gene absence from the mitochondrial genome of E. chlorotica. We demonstrate that foreign organelle retention generates metabolic novelty ("green animals") and is explained by anastomosis of distinct branches of the tree of life driven by predation and horizontal gene transfer.

Chronic renal failure among farm families in cascade irrigation systems in Sri Lanka associated with elevated dietary cadmium levels in rice and freshwater fish ( Tilapia )

Abstract: Chronic renal failure (CRF), in the main agricultural region under reservoir based cascade irrigation in Sri Lanka has reached crisis proportion Over 5,000 patients in the region are under treatment for CRF The objective of this study is to establish the etiology of the CRF Concentrations of nine heavy metals were determined in sediments, soils of reservoir peripheries, water and Nelumbo nucifera (lotus) grown in five major reservoirs that supply irrigation water All five reservoirs carried higher levels of dissolved cadmium (Cd), iron (Fe) and lead (Pb) Dissolved Cd in reservoir water ranged from 003 to 006 mg/l Sediment Cd concentration was 178–245 mg/kg No arsenic (As) was detected Cd content in lotus rhizomes was 25382 mg/kg The Provisional Tolerable Weekly Intake (PTWI) of Cd based on extreme exposure of rice is 8702–15927 μg/kg body weight (BW) for different age groups, 5–50 years The PTWI of Cd due to extreme exposure of fish is 6773–12469 μg/kg BW The PTWI on a rice staple with fish is 15475–28396 μg/kg BW The mean urinary cadmium (UCd) concentration in CRF patients of age group 40–60 years was 758 μg Cd/g creatinine and in asymptomatic persons UCd was 1162 μg Cd/g creatinine, indicating a chronic exposure to Cd The possible source of Cd in reservoir sediments and water is Cd-contaminated agrochemicals The CRF prevalent in north central Sri Lanka is a result of chronic dietary intake of Cd, supported by high natural levels of fluoride in drinking water, coupled with neglecting of routine de-silting of reservoirs for the past 20 years

Neurogenetics of courtship and mating in Drosophila.

Abstract: The reproductive biology of Drosophila melanogaster is described and critically discussed, primarily with regard to genetic studies of sex-specific behavior and its neural underpinnings. The investigatory history of this system includes, in addition to a host of recent neurobiological analyses of reproductive phenotypes, studies of mating as well as the behaviors leading up to that event. Courtship and mating have been delved into mostly with regard to male-specific behavior and biology, although a small number of studies has also pointed to the neural substrates of female reproduction. Sensory influences on interactions between courting flies have long been studied, partly by application of mutants and partly by surgical experiments. More recently, molecular-genetic approaches to sensations passing between flies in reproductive contexts have aimed to "dissect" further the meaning of separate sensory modalities. Notable among these are olfactory and contact-chemosensory stimuli, which perhaps have received an inordinate amount of attention in terms of the possibility that they could comprise the key cues involved in triggering and sustaining courtship actions. But visual and auditory stimuli are heavily involved as well--appreciated mainly from older experiments, but analyzable further using elementary approaches (single-gene mutations mutants and surgeries), as well as by applying the molecularly defined factors alluded to above. Regarding regulation of reproductive behavior by components of Drosophila's central nervous system (CNS), once again significant invigoration of the relevant inquiries has been stimulated and propelled by identification and application of molecular-genetic materials. A distinct plurality of the tools applied involves transposons inserted in the fly's chromosomes, defining "enhancer-trap" strains that can be used to label various portions of the nervous system and, in parallel, disrupt their structure and function by "driving" companion transgenes predesigned for these experimental purposes. Thus, certain components of interneuronal routes, functioning along pathways whose starting points are sensory reception by the peripheral nervous system (PNS), have been manipulated to enhance appreciation of sexually important sensory modalities, as well as to promote understanding of where such inputs end up within the CNS: Where are reproductively related stimuli processed, such that different kinds of sensation would putatively be integrated to mediate sex-specific behavioral readouts? In line with generic sensory studies that have tended to concentrate on chemical stimuli, PNS-to-CNS pathways focused upon in reproductive experiments relying on genic enhancers have mostly involved smell and taste. Enhancer traps have also been applied to disrupt various regions within the CNS to ask about the various ganglia, and portions thereof, that contribute to male- or female-specific behavior. These manipulations have encompassed structural or functional disruptions of such regions as well as application of molecular-genetic tricks to feminize or masculinize a given component of the CNS. Results of such experiments have, indeed, identified certain discrete subsets of centrally located ganglia that, on the one hand, lead to courtship defects when disrupted or, on the other, must apparently maintain sex-specific identity if the requisite courtship actions are to be performed. As just implied, perturbations of certain neural tissues not based on manipulating "sex factors" might lead to reproductive behavioral abnormalities, even though changing the sexual identity of such structures would not necessarily have analogous consequences. It has been valuable to uncover these sexually significant subsets of the Drosophila nervous system, although it must be said that not all of the transgenically based dissection outcomes are in agreement. Thus, the good news is that not all of the CNS is devoted to courtship control, whereby any and all locales disrupted might have led to sex-specific deficits; but the bad news is that the enhancer-trap approach to these matters has not led to definitive homing-in on some tractable number of mutually agreed-upon "courtship centers" within the brain or within the ventral nerve cord (VNC). The latter neural region, which comprises about half of the fly's CNS, is underanalyzed as to its sex-specific significance: How, for example, are various kinds of sensory inputs to posteriorly located PNS structures processed, such that they eventually end up modulating brain functions underlying courtship? And how are sex-specific motor outputs mediated by discrete collections of neurons within VNC ganglia--so that, for instance, male-specific whole-animal motor actions and appendage usages are evoked? These behaviors can be thought of as fixed action patterns. But it is increasingly appreciated that elements of the fly's reproductive behavior can be modulated by previous experience. In this regard, the neural substrates of conditioned courtship are being more and more analyzed, principally by further usages of various transgenic types. Additionally, a set of molecular neurogenetic experiments devoted to experience-dependent courtship was based on manipulations of a salient "sex gene" in D. melanogaster. This well-defined factor is called fruitless (fru). The gene, its encoded products, along with their behavioral and neurobiological significance, have become objects of frenetic attention in recent years. How normal, mutated, and molecularly manipulated forms of fru seem to be generating a good deal of knowledge and insight about male-specific courtship and mating is worthy of much attention. This previews the fact that fruitless matters are woven throughout this chapter as well as having a conspicuous section allocated to them. Finally, an acknowledgment that the reader is being subjected to lengthy preview of an article about this subject is given. This matter is mentioned because--in conjunction with the contemporary broadening and deepening of this investigatory area--brief summaries of its findings are appearing with increasing frequency. This chapter will, from time to time, present our opinion that a fair fraction of the recent minireviews are replete with too many catch phrases about what is really known. This is one reason why the treatment that follows not only attempts to describe the pertinent primary reports in detail but also pauses often to discuss our views about current understandings of sex-specific behavior in Drosophila and its underlying biology.

Paleoclimatology and paleo‐oceanography of the Norwegian and Greenland seas: glacial‐interglacial contrasts

Abstract: Synoptically mapped faunal abundance and faunal composition data, derived from a suite of 24 Norwegian Sea cores, were used to derive sea-surface temperatures for the last glacial maximum (18,000 B.P.), the last interglacial (120,000 B.P.), and isotope stage 5a (82,000 B.P.). Surface circulation and ice cover reconstructions for these three times, deduced from the sea-surface temperatures, suggest the following conclusions: (1) During glacial periods, Norwegian Sea surface circulation formed a single, sluggish, counterclockwise gyre that was caused by wind drag on the ubiquitous sea ice cover; (2) the last interglacial was characterized by a circulation pattern similar to that of today except that the two counterclockwise gyres were displaced toward the east and were more vigorous than they are today. This circulation pattern forced the Norwegian Current into a position close to the coast of Norway and permitted formation of a strong east-west temperature gradient close to the Scandinavian landmass; (3) interglacial periods prior to 120,000 B.P. had similar climatic conditions to the 82,000 B.P. level and were characterized by a weak two-gyre circulation pattern. The southern gyre, driven by wind stress in summer months, was ice covered in winters. The northern gyre had little open water even in summers and was primarily formed by wind drag on sea ice. Atmospheric modifications resulting from these circulation patterns and sea ice conditions produced varying climatic conditions in Scandinavia during interglacials prior to the Holocene. The climate was probably warmer and moister during the last interglacial (Eemian) than it is today. Other interglacials during the last 450,000 years, but prior to the Eemian, were probably colder and drier as the Norwegian Sea was not an important source of heat and moisture.

Three Magic Letters: Getting to Ph.D

Abstract: Three Magic Letters: Getting to Ph.D. by Michael T. Nettles and Catherine M. Millett. Baltimore, MD: The Johns Hopkins University Press, 2006. In the spring of 1995, Catherine Millett, a doctoral student at the time, approached faculty member Michael Nettles and asked: "How do doctoral students find the financial resources to support their academic interests and see themselves through the timely completion of their PhD degrees?" So began the exchange that spawned the collaboration that led to one of the most comprehensive and ambitious projects on doctoral education in the United States, Three Magic Letters: Getting to the Ph.D. This informative, comprehensive, and enjoyable book goes far beyond the initial question about funding to examine essentially all aspects of the doctoral experience. Nettles and Millett have collected, compiled, analyzed, and interpreted an impressive array of data to shed light on the complexity of the doctoral experience. A long-awaited release, Three Magic Letters offers readers an abundance of information regarding determinants of progress to the PhD, as their work reflects the findings of the largest survey of doctoral students yet completed. A total of 9,036 doctoral students in 11 fields of study across 21 universities were surveyed regarding their educational experience and progress to the degree. The study is broad and comprehensive, making it an invaluable resource for researchers, policy makers, faculty members, and doctoral students themselves. Nettles and Millet's work represents the burgeoning emphasis of studying doctoral education from the disciplinary perspective, as has been suggested by experts such as Golde and Dore (2004). This approach broadens our understanding of the contexts and cultures that influence the doctoral experience. The book begins with a refresher on the history of the doctoral degree as well as an overview of existing research on the PhD experience, especially in terms of time to degree, attrition, and completion, and it continues with a synopsis of the research design and sample. Subsequent chapters focus on findings related to particular aspects of the doctoral experience and their influence upon degree completion. Topics covered include admissions and screening, funding, socialization, research productivity, satisfaction, time to degree, performance, field differences, and group differences. The book is an unprecedented integration of topics that have previously been examined but never in a way that acknowledges disciplinary perspectives and demographic variables as Nettles and Millett do. The study findings are presented in way that is accessible and interesting. The conceptual analytical framework that guides Nettles and Millett in their research and writing builds upon the framework originally developed by Berelson (1960), in his seminal study on doctoral education in the United States, as well as upon the work by Bowen and Rudenstine (1992), among others. This framework is based upon the five experiences on which Nettles and Millett focused in their study, including type of funding, socialization, research productivity, satisfaction and stopping out of a doctoral program, and doctoral degree completion. Each of the five areas of analysis is made up of specific variables that contribute to a better understanding of the doctoral student experience. The framework suggests that "personal and academic backgrounds, along with other acquired benefits, contribute to the quality of students' experiences and outcomes" (p. 27). The book does a great job of providing detail about the variables, conceptual analytical framework, data analysis, and study findings in ways that are informative and thorough yet never dry. Given the expansiveness of the project, it is not feasible in a book review to provide a detailed account of the findings. The book generates many "new answers and new questions" about doctoral education that merit ongoing consideration. …

Antarctic temperature at orbital timescales controlled by local summer duration

Abstract: During the late Pleistocene epoch, proxies for Southern Hemisphere climate from the Antarctic ice cores vary nearly in phase with Northern Hemisphere insolation intensity at the precession and obliquity timescales. This coherence has led to the suggestion that Northern Hemisphere insolation controls Antarctic climate. However, it is unclear what physical mechanisms would tie southern climate to northern insolation. Here we call on radiative equilibrium estimates to show that Antarctic climate could instead respond to changes in the duration of local summer. Simple radiative equilibrium dictates that warmer annual average atmospheric temperatures occur as a result of a longer summer, as opposed to a more intense one, because temperature is more sensitive to insolation when the atmosphere is cooler. Furthermore, we show that a single-column atmospheric model reproduces this radiative equilibrium effect when forced exclusively by local Antarctic insolation, generating temperature variations that are coherent and in phase with proxies of Antarctic atmospheric temperature and surface conditions. We conclude that the duration of Southern Hemisphere summer is more likely to control Antarctic climate than the intensity of Northern Hemisphere summer with which it (often misleadingly) covaries. In our view, near interhemispheric climate symmetry at the obliquity and precession timescales arises from a northern response to local summer intensity and a southern response to local summer duration. On orbital timescales, Antarctic climate varies in phase with Northern Hemisphere insolation, but no physical mechanism for such a link is known. A new analysis suggests that at obliquity and precession timescales Antarctic climate may instead be responding to the duration of the local summer, which covaries with Northern insolation.

Ocean iron fertilization-Moving forward in a sea of uncertainty

Abstract: It is premature to sell carbon offsets from ocean iron fertilization unless research provides the scientific foundation to evaluate risks and benefits.

Molecular basis of the potential of vitamin D to prevent cancer.

Abstract: Objective: To review current research findings in cell biology, epidemiology, preclinical, and clinical trials on the protective effects of vitamin D against the development of cancers of the breast, colon, prostate, lung, and ovary. Current recommendations for optimal vitamin D status, the movement towards revision of standards, and reflections on healthy exposure to sunlight are also reviewed.Search methodology: A literature search was conducted in April and updated in September 2007. The Medline and Web of Knowledge databases were searched for primary and review articles published between 1970 and 2007, using the search terms ‘vitamin D’, ‘calcitriol’, ‘cancer’, ‘chemoprevention’, ‘nuclear receptor’, ‘vitamin D receptor’, ‘apoptosis’, ‘cell cycle’, ‘epidemiology’, and ‘cell adhesion molecule’. Articles that focused on epidemiological, preclinical, and clinical evidence for vitamin D's effects were selected and additional articles were obtained from reference lists of the retrieved articles.Find...

A census of oceanic anticyclonic eddies in the Gulf of Alaska

Abstract: In the Gulf of Alaska (GOA), mesoscale eddies play an important role in promoting off-shelf transport of heat, nutrients and biological populations into the HNLC water of the northeast Pacific Ocean. However, the spatial and temporal distribution of these eddies and their characteristics have not been substantially described. Here we apply an objective method (Okubo–Weiss parameter) for identifying and tracking eddies to 15 years (October 1992–2006) of satellite sea level anomaly data. The parameter allows the spatial and temporal variability in eddy activity to be defined, providing the first systematic census of anticyclonic eddies in the region. Eddies are generated principally on the eastern side of the basin and propagate either westward (Haida eddies) or along the western GOA shelf break (Alaskan Stream eddies). Seasonal maps of eddy density show fewest eddies in winter, maximum in spring/summer. The Haida and Alaskan Stream eddy corridors are clearly defined, as is an ‘eddy desert’ in the southwest of the basin, where the probability of an eddy being identified is zero. Maps of eddy trajectories for each year show substantial interannual variability in number and propagation paths. Greatest eddy activity occurs in 1994, 1997/1998 and 2004. Fewest eddies occur in 1996 and in the period from 1999 through 2002. Interannual variability in eddy characteristics (magnitude, propagation speed, diameter and duration) is assessed for the basin as a whole, and separately for the Alaskan Stream, Haida and Sitka/Yakutat formation regions. In general, Alaskan Stream eddies are more numerous, larger and more intense than Haida eddies. Periods of increased eddy activity do not necessarily correspond to El Nino events, but are associated with anomalous downwelling wind conditions along the continental margin.

Diversity of soil yeasts isolated from South Victoria Land, Antarctica.

Abstract: Unicellular fungi, commonly referred to as yeasts, were found to be components of the culturable soil fungal population in Taylor Valley, Mt. Discovery, Wright Valley, and two mountain peaks of South Victoria Land, Antarctica. Samples were taken from sites spanning a diversity of soil habitats that were not directly associated with vertebrate activity. A large proportion of yeasts isolated in this study were basidiomycetous species (89%), of which 43% may represent undescribed species, demonstrating that culturable yeasts remain incompletely described in these polar desert soils. Cryptococcus species represented the most often isolated genus (33%) followed by Leucosporidium (22%). Principle component analysis and multiple linear regression using stepwise selection was used to model the relation between abiotic variables (principle component 1 and principle component 2 scores) and yeast biodiversity (the number of species present at a given site). These analyses identified soil pH and electrical conductivity as significant predictors of yeast biodiversity. Species-specific PCR primers were designed to rapidly discriminate among the Dioszegia and Leucosporidium species collected in this study.