Showing papers by "University of Maine published in 2016"

Candidalysin is a fungal peptide toxin critical for mucosal infection

Abstract: Cytolytic proteins and peptide toxins are classical virulence factors of several bacterial pathogens which disrupt epithelial barrier function, damage cells and activate or modulate host immune responses. Such toxins have not been identified previously in human pathogenic fungi. Here we identify the first, to our knowledge, fungal cytolytic peptide toxin in the opportunistic pathogen Candida albicans. This secreted toxin directly damages epithelial membranes, triggers a danger response signalling pathway and activates epithelial immunity. Membrane permeabilization is enhanced by a positive charge at the carboxy terminus of the peptide, which triggers an inward current concomitant with calcium influx. C. albicans strains lacking this toxin do not activate or damage epithelial cells and are avirulent in animal models of mucosal infection. We propose the name 'Candidalysin' for this cytolytic peptide toxin; a newly identified, critical molecular determinant of epithelial damage and host recognition of the clinically important fungus, C. albicans.

Global patterns of kelp forest change over the past half-century

Abstract: Kelp forests (Order Laminariales) form key biogenic habitats in coastal regions of temperate and Arctic seas worldwide, providing ecosystem services valued in the range of billions of dollars annually. Although local evidence suggests that kelp forests are increasingly threatened by a variety of stressors, no comprehensive global analysis of change in kelp abundances currently exists. Here, we build and analyze a global database of kelp time series spanning the past half-century to assess regional and global trends in kelp abundances. We detected a high degree of geographic variation in trends, with regional variability in the direction and magnitude of change far exceeding a small global average decline (instantaneous rate of change = −0.018 y−1). Our analysis identified declines in 38% of ecoregions for which there are data (−0.015 to −0.18 y−1), increases in 27% of ecoregions (0.015 to 0.11 y−1), and no detectable change in 35% of ecoregions. These spatially variable trajectories reflected regional differences in the drivers of change, uncertainty in some regions owing to poor spatial and temporal data coverage, and the dynamic nature of kelp populations. We conclude that although global drivers could be affecting kelp forests at multiple scales, local stressors and regional variation in the effects of these drivers dominate kelp dynamics, in contrast to many other marine and terrestrial foundation species.

Cultural group selection plays an essential role in explaining human cooperation: A sketch of the evidence.

Abstract: Human cooperation is highly unusual. We live in large groups composed mostly of non-relatives. Evolutionists have proposed a number of explanations for this pattern, including cultural group selection and extensions of more general processes such as reciprocity, kin selection, and multi-level selection acting on genes. Evolutionary processes are consilient; they affect several different empirical domains, such as patterns of behavior and the proximal drivers of that behavior. In this target article, we sketch the evidence from five domains that bear on the explanatory adequacy of cultural group selection and competing hypotheses to explain human cooperation. Does cultural transmission constitute an inheritance system that can evolve in a Darwinian fashion? Are the norms that underpin institutions among the cultural traits so transmitted? Do we observe sufficient variation at the level of groups of considerable size for group selection to be a plausible process? Do human groups compete, and do success and failure in competition depend upon cultural variation? Do we observe adaptations for cooperation in humans that most plausibly arose by cultural group selection? If the answer to one of these questions is "no," then we must look to other hypotheses. We present evidence, including quantitative evidence, that the answer to all of the questions is "yes" and argue that we must take the cultural group selection hypothesis seriously. If culturally transmitted systems of rules (institutions) that limit individual deviance organize cooperation in human societies, then it is not clear that any extant alternative to cultural group selection can be a complete explanation.

On the recent contribution of the Greenland ice sheet to sea level change

Abstract: . We assess the recent contribution of the Greenland ice sheet (GrIS) to sea level change. We use the mass budget method, which quantifies ice sheet mass balance (MB) as the difference between surface mass balance (SMB) and solid ice discharge across the grounding line (D). A comparison with independent gravity change observations from GRACE shows good agreement for the overlapping period 2002–2015, giving confidence in the partitioning of recent GrIS mass changes. The estimated 1995 value of D and the 1958–1995 average value of SMB are similar at 411 and 418 Gt yr−1, respectively, suggesting that ice flow in the mid-1990s was well adjusted to the average annual mass input, reminiscent of an ice sheet in approximate balance. Starting in the early to mid-1990s, SMB decreased while D increased, leading to quasi-persistent negative MB. About 60 % of the associated mass loss since 1991 is caused by changes in SMB and the remainder by D. The decrease in SMB is fully driven by an increase in surface melt and subsequent meltwater runoff, which is slightly compensated by a small (

Circumpolar distribution and carbon storage of thermokarst landscapes

Abstract: Thermokarst is the process whereby the thawing of ice-rich permafrost ground causes land subsidence, resulting in development of distinctive landforms. Accelerated thermokarst due to climate change will damage infrastructure, but also impact hydrology, ecology and biogeochemistry. Here, we present a circumpolar assessment of the distribution of thermokarst landscapes, defined as landscapes comprised of current thermokarst landforms and areas susceptible to future thermokarst development. At 3.6 × 106 km2, thermokarst landscapes are estimated to cover ∼20% of the northern permafrost region, with approximately equal contributions from three landscape types where characteristic wetland, lake and hillslope thermokarst landforms occur. We estimate that approximately half of the below-ground organic carbon within the study region is stored in thermokarst landscapes. Our results highlight the importance of explicitly considering thermokarst when assessing impacts of climate change, including future landscape greenhouse gas emissions, and provide a means for assessing such impacts at the circumpolar scale.

Do geographically isolated wetlands influence landscape functions

Abstract: Geographically isolated wetlands (GIWs), those surrounded by uplands, exchange materials, energy, and organisms with other elements in hydrological and habitat networks, contributing to landscape functions, such as flow generation, nutrient and sediment retention, and biodiversity support. GIWs constitute most of the wetlands in many North American landscapes, provide a disproportionately large fraction of wetland edges where many functions are enhanced, and form complexes with other water bodies to create spatial and temporal heterogeneity in the timing, flow paths, and magnitude of network connectivity. These attributes signal a critical role for GIWs in sustaining a portfolio of landscape functions, but legal protections remain weak despite preferential loss from many landscapes. GIWs lack persistent surface water connections, but this condition does not imply the absence of hydrological, biogeochemical, and biological exchanges with nearby and downstream waters. Although hydrological and biogeochemical connectivity is often episodic or slow (e.g., via groundwater), hydrologic continuity and limited evaporative solute enrichment suggest both flow generation and solute and sediment retention. Similarly, whereas biological connectivity usually requires overland dispersal, numerous organisms, including many rare or threatened species, use both GIWs and downstream waters at different times or life stages, suggesting that GIWs are critical elements of landscape habitat mosaics. Indeed, weaker hydrologic connectivity with downstream waters and constrained biological connectivity with other landscape elements are precisely what enhances some GIW functions and enables others. Based on analysis of wetland geography and synthesis of wetland functions, we argue that sustaining landscape functions requires conserving the entire continuum of wetland connectivity, including GIWs.

Combining paleo-data and modern exclosure experiments to assess the impact of megafauna extinctions on woody vegetation

Abstract: Until recently in Earth history, very large herbivores (mammoths, ground sloths, diprotodons, and many others) occurred in most of the World’s terrestrial ecosystems, but the majority have gone extinct as part of the late-Quaternary extinctions. How has this large-scale removal of large herbivores affected landscape structure and ecosystem functioning? In this review, we combine paleo-data with information from modern exclosure experiments to assess the impact of large herbivores (and their disappearance) on woody species, landscape structure, and ecosystem functions. In modern landscapes characterized by intense herbivory, woody plants can persist by defending themselves or by association with defended species, can persist by growing in places that are physically inaccessible to herbivores, or can persist where high predator activity limits foraging by herbivores. At the landscape scale, different herbivore densities and assemblages may result in dynamic gradients in woody cover. The late-Quaternary extinctions were natural experiments in large-herbivore removal; the paleoecological record shows evidence of widespread changes in community composition and ecosystem structure and function, consistent with modern exclosure experiments. We propose a conceptual framework that describes the impact of large herbivores on woody plant abundance mediated by herbivore diversity and density, predicting that herbivore suppression of woody plants is strongest where herbivore diversity is high. We conclude that the decline of large herbivores induces major alterations in landscape structure and ecosystem functions.

The Amundsen Sea Low: Variability, Change, and Impact on Antarctic Climate

Abstract: The Amundsen Sea Low (ASL) is a climatological low pressure center that exerts considerable influence on the climate of West Antarctica. Its potential to explain important recent changes in Antarctic climate, for example in temperature and sea ice extent, means that it has become the focus of an increasing number of studies. Here, we summarize current understanding of the ASL, using reanalysis datasets to analyze recent variability and trends, and ice-core chemistry and climate model projections to examine past and future changes in the ASL, respectively. The ASL has deepened in recent decades, affecting the climate through its influence on the regional meridional wind field, which controls the advection of moisture and heat into the continent. Deepening of the ASL in spring is consistent with observed West Antarctic warming and greater sea ice extent in the Ross Sea. Climate model simulations for recent decades indicate that this deepening is mediated by tropical variability while climate model projections through the 21st century suggest that the ASL will deepen in some seasons in response to greenhouse gas concentration increases.

Revaluating ocean warming impacts on global phytoplankton

Abstract: Global satellite observations document expansions of the low-chlorophyll central ocean gyres and an overall inverse relationship between anomalies in sea surface temperature and phytoplankton chlorophyll concentrations. These findings can provide an invaluable glimpse into potential future ocean changes, but only if the story they tell is accurately interpreted. Chlorophyll is not simply a measure of phytoplankton biomass, but also registers changes in intracellular pigmentation arising from light-driven (photoacclimation) and nutrient-driven physiological responses. Here, we show that the photoacclimation response is an important component of temporal chlorophyll variability across the global ocean. This attribution implies that contemporary relationships between chlorophyll changes and ocean warming are not indicative of proportional changes in productivity, as light-driven decreases in chlorophyll can be associated with constant or even increased photosynthesis. Extension of these results to future change, however, requires further evaluation of how the multifaceted stressors of a warmer, higher-CO2 world will impact plankton communities. Satellite measurements of chlorophyll are used to infer phytoplankton biomass changes and the relationship to sea surface temperature. This study shows that chlorophyll changes can be light-driven so the temperature–biomass relationship may not hold in the future.

Ultra-thin metamaterial for perfect and omnidirectional sound absorption

Abstract: Using the concepts of slow sound and of critical coupling, an ultra-thin acoustic metamaterial panel for perfect and omnidirectional absorption is theoretically and experimentally conceived in this work. The system is made of a rigid panel with a periodic distribution of thin closed slits, the upper wall of which is loaded by Helmholtz Resonators (HRs). The presence of resonators produces a slow sound propagation shifting the resonance frequency of the slit to the deep sub-wavelength regime ($\lambda/88$). By controlling the geometry of the slit and the HRs, the intrinsic visco-thermal losses can be tuned in order to exactly compensate the energy leakage of the system and fulfill the critical coupling condition to create the perfect absorption of sound in a large range of incidence angles due to the deep subwavelength behavior.

Prediction of the Export and Fate of Global Ocean Net Primary Production: The EXPORTS Science Plan

Abstract: Ocean ecosystems play a critical role in the Earth’s carbon cycle and the quantification of their impacts for both present conditions and for predictions into the future remains one of the greatest challenges in oceanography. The goal of the EXport Processes in the Ocean from Remote Sensing (EXPORTS) Science Plan is to develop a predictive understanding of the export and fate of global ocean net primary production (NPP) and its implications for present and future climates. The achievement of this goal requires a quantification of the mechanisms that control the export of carbon from the euphotic zone as well as its fate in the underlying “twilight zone” where some fraction of exported carbon will be sequestered in the ocean’s interior on time scales of months to millennia. Here we present a measurement / synthesis / modeling framework aimed at quantifying the fates of upper ocean NPP and its impacts on the global carbon cycle based upon the EXPORTS Science Plan. The proposed approach will diagnose relationships among the ecological, biogeochemical and physical oceanographic processes that control carbon cycling across a range of ecosystem and carbon cycling states leading to advances in satellite diagnostic and numerical prognostic models. To collect these data, a combination of ship and robotic field sampling, satellite remote sensing and numerical modeling is proposed which enables the sampling of the many pathways of NPP export and fates. This coordinated, process-oriented approach has the potential to foster new insights on ocean carbon cycling that maximizes its societal relevance through the achievement of research goals of many international research agencies and will be a key step towards our understanding of the Earth as an integrated system.

Microbial metabolisms in a 2.5-km-deep ecosystem created by hydraulic fracturing in shales

Abstract: Hydraulic fracturing is the industry standard for extracting hydrocarbons from shale formations. Attention has been paid to the economic benefits and environmental impacts of this process, yet the biogeochemical changes induced in the deep subsurface are poorly understood. Recent single-gene investigations revealed that halotolerant microbial communities were enriched after hydraulic fracturing. Here, the reconstruction of 31 unique genomes coupled to metabolite data from the Marcellus and Utica shales revealed that many of the persisting organisms play roles in methylamine cycling, ultimately supporting methanogenesis in the deep biosphere. Fermentation of injected chemical additives also sustains long-term microbial persistence, while thiosulfate reduction could produce sulfide, contributing to reservoir souring and infrastructure corrosion. Extensive links between viruses and microbial hosts demonstrate active viral predation, which may contribute to the release of labile cellular constituents into the extracellular environment. Our analyses show that hydraulic fracturing provides the organismal and chemical inputs for colonization and persistence in the deep terrestrial subsurface.

Salt marsh persistence is threatened by predicted sea-level rise

Abstract: Salt marshes buffer coastlines and provide critical ecosystem services from storm protection to food provision. Worldwide, these ecosystems are in danger of disappearing if they cannot increase elevation at rates that match sea-level rise. However, the magnitude of loss to be expected is not known. A synthesis of existing records of salt marsh elevation change was conducted in order to consider the likelihood of their future persistence. This analysis indicates that many salt marshes did not keep pace with sea-level rise in the past century and kept pace even less well over the past two decades. Salt marshes experiencing higher local sea-level rise rates were less likely to be keeping pace. These results suggest that sea-level rise will overwhelm most salt marshes’ capacity to maintain elevation. Under the most optimistic IPCC emissions pathway, 60% of the salt marshes studied will be gaining elevation at a rate insufficient to keep pace with sea-level rise by 2100. Without mitigation of greenhouse gas emissions this potential loss could exceed 90%, which will have substantial ecological, economic, and human health consequences.

Migraine Triggers and Oxidative Stress: A Narrative Review and Synthesis.

Abstract: Background Blau theorized that migraine triggers are exposures that in higher amounts would damage the brain. The recent discovery that the TRPA1 ion channel transduces oxidative stress and triggers neurogenic inflammation suggests that oxidative stress may be the common denominator underlying migraine triggers. Objective The aim of this review is to present and discuss the available literature on the capacity of common migraine triggers to generate oxidative stress in the brain. Methods A Medline search was conducted crossing the terms “oxidative stress” and “brain” with “alcohol,” “dehydration,” “water deprivation,” “monosodium glutamate,” “aspartame,” “tyramine,” “phenylethylamine,” “dietary nitrates,” “nitrosamines,” “noise,” “weather,” “air pollutants,” “hypoglycemia,” “hypoxia,” “infection,” “estrogen,” “circadian,” “sleep deprivation,” “information processing,” “psychosocial stress,” or “nitroglycerin and tolerance.” “Flavonoids” was crossed with “prooxidant.” The reference lists of the resulting articles were examined for further relevant studies. The focus was on empirical studies, in vitro and of animals, of individual triggers, indicating whether and/or by what mechanism they can generate oxidative stress. Results In all cases except pericranial pain, common migraine triggers are capable of generating oxidative stress. Depending on the trigger, mechanisms include a high rate of energy production by the mitochondria, toxicity or altered membrane properties of the mitochondria, calcium overload and excitotoxicity, neuroinflammation and activation of microglia, and activation of neuronal nicotinamide adenine dinucleotide phosphate (NADPH) oxidase. For some triggers, oxidants also arise as a byproduct of monoamine oxidase or cytochrome P450 processing, or from uncoupling of nitric oxide synthase. Conclusions Oxidative stress is a plausible unifying principle behind the types of migraine triggers encountered in clinical practice. The possible implications for prevention and for understanding the nature of the migraine attack are discussed.

Diffusion in nanoporous materials: fundamental principles, insights and challenges

Abstract: Following a brief review of Fick's laws and the theory of diffusion in a homogeneous medium, we consider the application of the Fickian model to diffusion in nanoporous materials. If the pore system is statistically uniform the simple Fickian model is directly applicable. Inhomogeneities such as surface or internal barriers require some adjustments to the model but Fick's equations still provide a valid approach. Hierarchical pore systems present a more serious challenge. When there is rapid exchange between the different regions such systems conform to the simple Fickian model, with a diffusivity corresponding to the mean of the diffusivities in the different regions. In contrast, when the condition of rapid exchange is not fulfilled the simple Fickian model is not applicable and the situation becomes more complicated. Simple hierarchical pore structures such as the micropore/macropore system typically found in commercial adsorbents and catalysts can still be described by a dual resistance Fickian model but for more complex hierarchical pore structures Monte Carlo or MD simulations offer the only realistic approach. The measurement of self-diffusion by PFG NMR and by microimaging (notably by interference microscopy) is also reviewed and selected examples are presented to show the detailed information that can be extracted from such measurements, especially when accompanied by molecular simulations. Examples highlighting the relevance of a detailed knowledge of the various steps of mass transfer for a transport-optimized technological application of nanoporous materials, notably for molecular separations and mass conversions, are provided.

Online Mathematics Homework Increases Student Achievement

Abstract: In a randomized field trial with 2,850 seventh-grade mathematics students, we evaluated whether an educational technology intervention increased mathematics learning. Assigning homework is common y...

Megafaunal Impacts on Structure and Function of Ocean Ecosystems

Abstract: Here, we identify the extant species of marine megafauna (>45 kg maximum reported mass), provide a conceptual template for the ways in which these species influence the structure and function of ocean ecosystems, and review the published evidence for such influences. Ecological influences of more than 90% of the 338 known species of extant ocean megafauna are unstudied and thus unknown. The most widely known effect of those few species that have been studied is direct prey limitation, which occurs through consumption and risk avoidance behavior. Consumer-prey interactions result in indirect effects that extend through marine ecosystems to other species and ecological processes. Marine megafauna transport energy, nutrients, and other materials vertically and horizontally through the oceans, often over long distances. The functional relationships between these various ecological impacts and megafauna population densities, in the few well-studied cases, are characterized by phase shifts and hysteresis.

Wildfire, climate, and invasive grass interactions negatively impact an indicator species by reshaping sagebrush ecosystems

Abstract: Iconic sagebrush ecosystems of the American West are threatened by larger and more frequent wildfires that can kill sagebrush and facilitate invasion by annual grasses, creating a cycle that alters sagebrush ecosystem recovery post disturbance. Thwarting this accelerated grass–fire cycle is at the forefront of current national conservation efforts, yet its impacts on wildlife populations inhabiting these ecosystems have not been quantified rigorously. Within a Bayesian framework, we modeled 30 y of wildfire and climatic effects on population rates of change of a sagebrush-obligate species, the greater sage-grouse, across the Great Basin of western North America. Importantly, our modeling also accounted for variation in sagebrush recovery time post fire as determined by underlying soil properties that influence ecosystem resilience to disturbance and resistance to invasion. Our results demonstrate that the cumulative loss of sagebrush to direct and indirect effects of wildfire has contributed strongly to declining sage-grouse populations over the past 30 y at large spatial scales. Moreover, long-lasting effects from wildfire nullified pulses of sage-grouse population growth that typically follow years of higher precipitation. If wildfire trends continue unabated, model projections indicate sage-grouse populations will be reduced to 43% of their current numbers over the next three decades. Our results provide a timely example of how altered fire regimes are disrupting recovery of sagebrush ecosystems and leading to substantial declines of a widespread indicator species. Accordingly, we present scenario-based stochastic projections to inform conservation actions that may help offset the adverse effects of wildfire on sage-grouse and other wildlife populations.

Holocene shifts in the assembly of plant and animal communities implicate human impacts

Abstract: Understanding how ecological communities are organized and how they change through time is critical to predicting the effects of climate change. Recent work documenting the co-occurrence structure of modern communities found that most significant species pairs co-occur less frequently than would be expected by chance. However, little is known about how co-occurrence structure changes through time. Here we evaluate changes in plant and animal community organization over geological time by quantifying the co-occurrence structure of 359,896 unique taxon pairs in 80 assemblages spanning the past 300 million years. Co-occurrences of most taxon pairs were statistically random, but a significant fraction were spatially aggregated or segregated. Aggregated pairs dominated from the Carboniferous period (307 million years ago) to the early Holocene epoch (11,700 years before present), when there was a pronounced shift to more segregated pairs, a trend that continues in modern assemblages. The shift began during the Holocene and coincided with increasing human population size and the spread of agriculture in North America. Before the shift, an average of 64% of significant pairs were aggregated; after the shift, the average dropped to 37%. The organization of modern and late Holocene plant and animal assemblages differs fundamentally from that of assemblages over the past 300 million years that predate the large-scale impacts of humans. Our results suggest that the rules governing the assembly of communities have recently been changed by human activity.

Building a sustainable energy future, one community at a time

Abstract: Solving energy issues requires integrated solutions at all societal and institutional levels. Community renewable energy and energy efficiency initiatives offer a complementary model for renewable energy deployment and have several advantages over the prevailing “ top down” strategy employed in the US. In this paper, we present a review of the theoretical basis for community energy as a catalyst for energy behavior change; examine contrasting viewpoints of the definition of community energy; and review community energy literature. The first literature review compares energy behavior lessons from context independent individualistic and context dependent collective action theories. The review of community energy literature lists the energy option and geographical focus of more than 70 community energy studies from around the world and summarizes key lessons from this literature. In addition, we also present the data sources for a new US Community Energy Database that will be publicly available in the near future and introduce a new classification system for community renewable energy projects based on the results of this database. Finally, we present recommendations for future research in this rapidly growing field.

Multiple myeloma in the marrow: pathogenesis and treatments

Abstract: Multiple myeloma (MM) is a B cell malignancy resulting in osteolytic lesions and fractures. In the disease state, bone healing is limited owing to increased osteoclastic and decreased osteoblastic activity, as well as an MM-induced forward-feedback cycle where bone-embedded growth factors further enhance tumor progression as bone is resorbed. Recent work on somatic mutation in MM tumors has provided insight into cytogenetic changes associated with this disease; the initiating driver mutations causing MM are diverse because of the complexity and multitude of mutations inherent in MM tumor cells. This manuscript provides an overview of MM pathogenesis by summarizing cytogenic changes related to oncogenes and tumor suppressors associated with MM, reviewing risk factors, and describing the disease progression from monoclonal gammopathy of undetermined significance to overt MM. It also highlights the importance of the bone marrow microenvironment (BMM) in the establishment and progression of MM, as well as associated MM-induced bone disease, and the relationship of the bone marrow to current and future therapeutics. This review highlights why understanding the basic biology of the healthy and diseased BMM is crucial in the quest for better treatments and work toward a cure for genetically diverse diseases such as MM.

The Physics and Physical Chemistry of Molecular Machines.

Abstract: The concept of a "power stroke"-a free-energy releasing conformational change-appears in almost every textbook that deals with the molecular details of muscle, the flagellar rotor, and many other biomolecular machines. Here, it is shown by using the constraints of microscopic reversibility that the power stroke model is incorrect as an explanation of how chemical energy is used by a molecular machine to do mechanical work. Instead, chemically driven molecular machines operating under thermodynamic constraints imposed by the reactant and product concentrations in the bulk function as information ratchets in which the directionality and stopping torque or stopping force are controlled entirely by the gating of the chemical reaction that provides the fuel for the machine. The gating of the chemical free energy occurs through chemical state dependent conformational changes of the molecular machine that, in turn, are capable of generating directional mechanical motions. In strong contrast to this general conclusion for molecular machines driven by catalysis of a chemical reaction, a power stroke may be (and often is) an essential component for a molecular machine driven by external modulation of pH or redox potential or by light. This difference between optical and chemical driving properties arises from the fundamental symmetry difference between the physics of optical processes, governed by the Bose-Einstein relations, and the constraints of microscopic reversibility for thermally activated processes.

Gender, Experience, and Self-Efficacy in Introductory Physics.

Abstract: Using an in-the-moment sampling technique the differences between men and women's self-efficacy in different activity areas is investigated.

Frequency of marine heatwaves in the North Atlantic and North Pacific since 1950

Abstract: Extreme and large-scale warming events in the ocean have been dubbed marine heatwaves, and these have been documented in both the Northern and Southern Hemispheres. This paper examines the intensity, duration, and frequency of positive sea surface temperature anomalies in the North Atlantic and North Pacific Oceans over the period 1950–2014 using an objective definition for marine heatwaves based on their probability of occurrence. Small-area anomalies occur more frequently than large-area anomalies, and this relationship can be characterized by a power law distribution. The relative frequency of large- versus small-area anomalies, represented by the power law slope parameter, is modulated by basin-scale modes of natural climate variability and anthropogenic warming. Findings suggest that the probability of marine heatwaves is a trade-off between size, intensity, and duration and that region specific variability modulates the frequency of these events.

Neutrophil attack triggers extracellular trap-dependent Candida cell wall remodeling and altered immune recognition

Abstract: Pathogens hide immunogenic epitopes from the host to evade immunity, persist and cause infection. The opportunistic human fungal pathogen Candida albicans, which can cause fatal disease in immunocompromised patient populations, offers a good example as it masks the inflammatory epitope β-glucan in its cell wall from host recognition. It has been demonstrated previously that β-glucan becomes exposed during infection in vivo but the mechanism behind this exposure was unknown. Here, we show that this unmasking involves neutrophil extracellular trap (NET) mediated attack, which triggers changes in fungal cell wall architecture that enhance immune recognition by the Dectin-1 β-glucan receptor in vitro. Furthermore, using a mouse model of disseminated candidiasis, we demonstrate the requirement for neutrophils in triggering these fungal cell wall changes in vivo. Importantly, we found that fungal epitope unmasking requires an active fungal response in addition to the stimulus provided by neutrophil attack. NET-mediated damage initiates fungal MAP kinase-driven responses, particularly by Hog1, that dynamically relocalize cell wall remodeling machinery including Chs3, Phr1 and Sur7. Neutrophil-initiated cell wall disruptions augment some macrophage cytokine responses to attacked fungi. This work provides insight into host-pathogen interactions during disseminated candidiasis, including valuable information about how the C. albicans cell wall responds to the biotic stress of immune attack. Our results highlight the important but underappreciated concept that pattern recognition during infection is dynamic and depends on the host-pathogen dialog.

Development-on-chip: in vitro neural tube patterning with a microfluidic device.

Abstract: Embryogenesis is a highly regulated process in which the precise spatial and temporal release of soluble cues directs differentiation of multipotent stem cells into discrete populations of specialized adult cell types. In the spinal cord, neural progenitor cells are directed to differentiate into adult neurons through the action of mediators released from nearby organizing centers, such as the floor plate and paraxial mesoderm. These signals combine to create spatiotemporal diffusional landscapes that precisely regulate the development of the central nervous system (CNS). Currently, in vivo and ex vivo studies of these signaling factors present some inherent ambiguity. In vitro methods are preferred for their enhanced experimental clarity but often lack the technical sophistication required for biological realism. In this article, we present a versatile microfluidic platform capable of mimicking the spatial and temporal chemical environments found in vivo during neural tube development. Simultaneous opposing and/or orthogonal gradients of developmental morphogens can be maintained, resulting in neural tube patterning analogous to that observed in vivo.