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Showing papers by "University of Reading published in 2014"


Journal ArticleDOI
TL;DR: An expert panel was convened in October 2013 by the International Scientific Association for Probiotics and Prebiotics (ISAPP) to discuss the field of probiotics and the appropriate use and scope of the term probiotic.
Abstract: An expert panel was convened in October 2013 by the International Scientific Association for Probiotics and Prebiotics (ISAPP) to discuss the field of probiotics. It is now 13 years since the definition of probiotics and 12 years after guidelines were published for regulators, scientists and industry by the Food and Agriculture Organization of the United Nations and the WHO (FAO/WHO). The FAO/WHO definition of a probiotic--"live microorganisms which when administered in adequate amounts confer a health benefit on the host"--was reinforced as relevant and sufficiently accommodating for current and anticipated applications. However, inconsistencies between the FAO/WHO Expert Consultation Report and the FAO/WHO Guidelines were clarified to take into account advances in science and applications. A more precise use of the term 'probiotic' will be useful to guide clinicians and consumers in differentiating the diverse products on the market. This document represents the conclusions of the ISAPP consensus meeting on the appropriate use and scope of the term probiotic.

5,114 citations


Posted Content
TL;DR: The third edition has been updated with new data, extensive examples and additional introductory material on mathematics, making the book more accessible to students encountering econometrics for the first time as discussed by the authors.
Abstract: This bestselling and thoroughly classroom-tested textbook is a complete resource for finance students. A comprehensive and illustrated discussion of the most common empirical approaches in finance prepares students for using econometrics in practice, while detailed case studies help them understand how the techniques are used in relevant financial contexts. Worked examples from the latest version of the popular statistical software EViews guide students to implement their own models and interpret results. Learning outcomes, key concepts and end-of-chapter review questions (with full solutions online) highlight the main chapter takeaways and allow students to self-assess their understanding. Building on the successful data- and problem-driven approach of previous editions, this third edition has been updated with new data, extensive examples and additional introductory material on mathematics, making the book more accessible to students encountering econometrics for the first time. A companion website, with numerous student and instructor resources, completes the learning package.

2,797 citations


Journal ArticleDOI
TL;DR: This article showed that a doubling in the occurrence of such extreme episodes is caused by increased surface warming of the eastern equatorial Pacific Ocean, which results in the atmospheric conditions required for these event to occur.
Abstract: Extreme El Nino events cause global disruption of weather patterns and affect ecosystems and agriculture through changes in rainfall. Model projections show that a doubling in the occurrence of such extreme episodes is caused by increased surface warming of the eastern equatorial Pacific Ocean, which results in the atmospheric conditions required for these event to occur.

1,672 citations


Journal ArticleDOI
TL;DR: It is shown that climate change is likely to exacerbate regional and global water scarcity considerably and GHM uncertainty is particularly dominant in many regions affected by declining water resources, suggesting a high potential for improved water resource projections through hydrological model development.
Abstract: Water scarcity severely impairs food security and economic prosperity in many countries today. Expected future population changes will, in many countries as well as globally, increase the pressure on available water resources. On the supply side, renewable water resources will be affected by projected changes in precipitation patterns, temperature, and other climate variables. Here we use a large ensemble of global hydrological models (GHMs) forced by five global climate models and the latest greenhouse-gas concentration scenarios (Representative Concentration Pathways) to synthesize the current knowledge about climate change impacts on water resources. We show that climate change is likely to exacerbate regional and global water scarcity considerably. In particular, the ensemble average projects that a global warming of 2 °C above present (approximately 2.7 °C above preindustrial) will confront an additional approximate 15% of the global population with a severe decrease in water resources and will increase the number of people living under absolute water scarcity (<500 m3 per capita per year) by another 40% (according to some models, more than 100%) compared with the effect of population growth alone. For some indicators of moderate impacts, the steepest increase is seen between the present day and 2 °C, whereas indicators of very severe impacts increase unabated beyond 2 °C. At the same time, the study highlights large uncertainties associated with these estimates, with both global climate models and GHMs contributing to the spread. GHM uncertainty is particularly dominant in many regions affected by declining water resources, suggesting a high potential for improved water resource projections through hydrological model development.

1,295 citations


Journal ArticleDOI
TL;DR: It is demonstrated through 13C high-resolution magic-angle-spinning that 13C acetate from fermentation of 13C-labelled carbohydrate in the colon increases hypothalamic 13Cacetate above baseline levels, suggesting that acetate has a direct role in central appetite regulation.
Abstract: Increased intake of dietary carbohydrate that is fermented in the colon by the microbiota has been reported to decrease body weight, although the mechanism remains unclear. Here we use in vivo11C-acetate and PET-CT scanning to show that colonic acetate crosses the blood–brain barrier and is taken up by the brain. Intraperitoneal acetate results in appetite suppression and hypothalamic neuronal activation patterning. We also show that acetate administration is associated with activation of acetyl-CoA carboxylase and changes in the expression profiles of regulatory neuropeptides that favour appetite suppression. Furthermore, we demonstrate through 13C high-resolution magic-angle-spinning that 13C acetate from fermentation of 13C-labelled carbohydrate in the colon increases hypothalamic 13C acetate above baseline levels. Hypothalamic 13C acetate regionally increases the 13C labelling of the glutamate–glutamine and GABA neuroglial cycles, with hypothalamic 13C lactate reaching higher levels than the ‘remaining brain’. These observations suggest that acetate has a direct role in central appetite regulation.

1,058 citations


Journal ArticleDOI
TL;DR: In this article, a holistic perspective on changing rainfall-driven flood risk is provided for the late 20th and early 21st centuries, which includes an assessment of changes in flood risk in seven of the regions considered in the recent IPCC SREX report.
Abstract: A holistic perspective on changing rainfall-driven flood risk is provided for the late 20th and early 21st centuries. Economic losses from floods have greatly increased, principally driven by the expanding exposure of assets at risk. It has not been possible to attribute rain-generated peak streamflow trends to anthropogenic climate change over the past several decades. Projected increases in the frequency and intensity of heavy rainfall, based on climate models, should contribute to increases in precipitation-generated local flooding (e.g. flash flooding and urban flooding). This article assesses the literature included in the IPCC SREX report and new literature published since, and includes an assessment of changes in flood risk in seven of the regions considered in the recent IPCC SREX report—Africa, Asia, Central and South America, Europe, North America, Oceania and Polar regions. Also considering newer publications, this article is consistent with the recent IPCC SREX assessment finding that ...

957 citations


Journal ArticleDOI
TL;DR: The WFDEI data set has been generated using the same methodology as the widely used WATCH Forcing Data (WFD) by making use of the ERA-Interim reanalysis data.
Abstract: The WFDEI meteorological forcing data set has been generated using the same methodology as the widely used WATCH Forcing Data (WFD) by making use of the ERA-Interim reanalysis data. We discuss the specifics of how changes in the reanalysis and processing have led to improvement over the WFD. We attribute improvements in precipitation and wind speed to the latest reanalysis basis data and improved downward shortwave fluxes to the changes in the aerosol corrections. Covering 1979–2012, the WFDEI will allow more thorough comparisons of hydrological and Earth System model outputs with hydrologically and phenologically relevant satellite products than using the WFD.

873 citations


Journal ArticleDOI
TL;DR: CBD bears investigation in epilepsy and other neuropsychiatric disorders, including anxiety, schizophrenia, addiction, and neonatal hypoxic‐ischemic encephalopathy, however, data from well‐powered double‐blind randomized, controlled studies on the efficacy of pure CBD for any disorder is lacking.
Abstract: To present a summary of current scientific evidence about the cannabinoid, cannabidiol (CBD) with regard to its relevance to epilepsy and other selected neuropsychiatric disorders. We summarize the presentations from a conference in which invited participants reviewed relevant aspects of the physiology, mechanisms of action, pharmacology, and data from studies with animal models and human subjects. Cannabis has been used to treat disease since ancient times. Δ(9) -Tetrahydrocannabinol (Δ(9) -THC) is the major psychoactive ingredient and CBD is the major nonpsychoactive ingredient in cannabis. Cannabis and Δ(9) -THC are anticonvulsant in most animal models but can be proconvulsant in some healthy animals. The psychotropic effects of Δ(9) -THC limit tolerability. CBD is anticonvulsant in many acute animal models, but there are limited data in chronic models. The antiepileptic mechanisms of CBD are not known, but may include effects on the equilibrative nucleoside transporter; the orphan G-protein-coupled receptor GPR55; the transient receptor potential of vanilloid type-1 channel; the 5-HT1a receptor; and the α3 and α1 glycine receptors. CBD has neuroprotective and antiinflammatory effects, and it appears to be well tolerated in humans, but small and methodologically limited studies of CBD in human epilepsy have been inconclusive. More recent anecdotal reports of high-ratio CBD:Δ(9) -THC medical marijuana have claimed efficacy, but studies were not controlled. CBD bears investigation in epilepsy and other neuropsychiatric disorders, including anxiety, schizophrenia, addiction, and neonatal hypoxic-ischemic encephalopathy. However, we lack data from well-powered double-blind randomized, controlled studies on the efficacy of pure CBD for any disorder. Initial dose-tolerability and double-blind randomized, controlled studies focusing on target intractable epilepsy populations such as patients with Dravet and Lennox-Gastaut syndromes are being planned. Trials in other treatment-resistant epilepsies may also be warranted. A PowerPoint slide summarizing this article is available for download in the Supporting Information section here.

766 citations


Journal ArticleDOI
TL;DR: In this paper, the ability of CMIP3 and CMIP5 coupled ocean-atmosphere general circulation models (CGCMs) to simulate the tropical Pacific mean state and El Nino-Southern Oscillation (ENSO) was analyzed.
Abstract: We analyse the ability of CMIP3 and CMIP5 coupled ocean–atmosphere general circulation models (CGCMs) to simulate the tropical Pacific mean state and El Nino-Southern Oscillation (ENSO). The CMIP5 multi-model ensemble displays an encouraging 30 % reduction of the pervasive cold bias in the western Pacific, but no quantum leap in ENSO performance compared to CMIP3. CMIP3 and CMIP5 can thus be considered as one large ensemble (CMIP3 + CMIP5) for multi-model ENSO analysis. The too large diversity in CMIP3 ENSO amplitude is however reduced by a factor of two in CMIP5 and the ENSO life cycle (location of surface temperature anomalies, seasonal phase locking) is modestly improved. Other fundamental ENSO characteristics such as central Pacific precipitation anomalies however remain poorly represented. The sea surface temperature (SST)-latent heat flux feedback is slightly improved in the CMIP5 ensemble but the wind-SST feedback is still underestimated by 20–50 % and the shortwave-SST feedbacks remain underestimated by a factor of two. The improvement in ENSO amplitudes might therefore result from error compensations. The ability of CMIP models to simulate the SST-shortwave feedback, a major source of erroneous ENSO in CGCMs, is further detailed. In observations, this feedback is strongly nonlinear because the real atmosphere switches from subsident (positive feedback) to convective (negative feedback) regimes under the effect of seasonal and interannual variations. Only one-third of CMIP3 + CMIP5 models reproduce this regime shift, with the other models remaining locked in one of the two regimes. The modelled shortwave feedback nonlinearity increases with ENSO amplitude and the amplitude of this feedback in the spring strongly relates with the models ability to simulate ENSO phase locking. In a final stage, a subset of metrics is proposed in order to synthesize the ability of each CMIP3 and CMIP5 models to simulate ENSO main characteristics and key atmospheric feedbacks.

679 citations


Journal ArticleDOI
TL;DR: For example, this paper found that scientific confidence in climate change effects is much higher for aspects related to global patterns of surface temperature, than for circulation, necessitating a risk-based approach to decision making.
Abstract: Scientific confidence in climate change effects is much higher for aspects related to global patterns of surface temperature, than for circulation. Circulation will remain hard to predict, necessitating a risk-based approach to decision making.

677 citations


Journal ArticleDOI
TL;DR: This study demonstrates that different representations of terrestrial water-cycle processes in GIMs are responsible for a much larger uncertainty in the response of hydrological drought to climate change than previously thought.
Abstract: Increasing concentrations of greenhouse gases in the atmosphere are expected to modify the global water cycle with significant consequences for terrestrial hydrology. We assess the impact of climate change on hydrological droughts in a multimodel experiment including seven global impact models (GIMs) driven by bias-corrected climate from five global climate models under four representative concentration pathways (RCPs). Drought severity is defined as the fraction of land under drought conditions. Results show a likely increase in the global severity of hydrological drought at the end of the 21st century, with systematically greater increases for RCPs describing stronger radiative forcings. Under RCP8.5, droughts exceeding 40% of analyzed land area are projected by nearly half of the simulations. This increase in drought severity has a strong signal-to-noise ratio at the global scale, and Southern Europe, the Middle East, the Southeast United States, Chile, and South West Australia are identified as possible hotspots for future water security issues. The uncertainty due to GIMs is greater than that from global climate models, particularly if including a GIM that accounts for the dynamic response of plants to CO2 and climate, as this model simulates little or no increase in drought frequency. Our study demonstrates that different representations of terrestrial water-cycle processes in GIMs are responsible for a much larger uncertainty in the response of hydrological drought to climate change than previously thought. When assessing the impact of climate change on hydrology, it is therefore critical to consider a diverse range of GIMs to better capture the uncertainty.

Journal ArticleDOI
01 Feb 2014-Catena
TL;DR: This work guides readers through computing the sample variogram and modelling it by weighted least-squares fitting and explains how to choose the most suitable functions by a combination of graphics and statistical diagnostics.
Abstract: Many environmental scientists are analysing spatial data by geostatistical methods and interpolating from sparse sample data by kriging to make maps. They recognize its merits in providing unbiased estimates with minimum variance. Several statistical packages now have the facilities they require, as do some geographic information systems. In the latter kriging is an option for interpolation that can be done at the press of a few buttons. Unfortunately, the ease conferred by this allows one to krige without understanding and to produce unreliable and even misleading results. Crucial for sound kriging is a plausible function for the spatial covariances or, more widely, of the variogram. The variogram must be estimated reliably and then modelled with valid mathematical functions. This requires an understanding of the assumptions in the underlying theory of random processes on which geostatistics is based. Here we guide readers through computing the sample variogram and modelling it by weighted least-squares fitting. We explain how to choose the most suitable functions by a combination of graphics and statistical diagnostics. Ordinary kriging follows straightforwardly from the model, but small changes in the model function and its parameters can affect the kriging error variances. When kriging is automated these effects remain unknown. We explain the choices to be made when kriging, i.e. whether the support is at points or over blocks, and whether the predictions are global or within moving windows.

Journal ArticleDOI
TL;DR: This paper provided an update on research in the relatively new and fast-moving field of decadal climate prediction, and addressed the use of Decadal climate predictions not only for potential users of such information but also for improving our understanding of processes in the climate system.
Abstract: This paper provides an update on research in the relatively new and fast-moving field of decadal climate prediction, and addresses the use of decadal climate predictions not only for potential users of such information but also for improving our understanding of processes in the climate system. External forcing influences the predictions throughout, but their contributions to predictive skill become dominant after most of the improved skill from initialization with observations vanishes after about 6–9 years. Recent multimodel results suggest that there is relatively more decadal predictive skill in the North Atlantic, western Pacific, and Indian Oceans than in other regions of the world oceans. Aspects of decadal variability of SSTs, like the mid-1970s shift in the Pacific, the mid-1990s shift in the northern North Atlantic and western Pacific, and the early-2000s hiatus, are better represented in initialized hindcasts compared to uninitialized simulations. There is evidence of higher skill in initialize...

Journal ArticleDOI
TL;DR: In this article, the authors proposed a legume-based grassland-livestock system for sustainable and competitive ruminant production systems, and suggested that forage legumes will become more important in the future.
Abstract: European grassland-based livestock production systems face the challenge of producing more meat and milk to meet increasing world demands and to achieve this using fewer resources. Legumes offer great potential for achieving these objectives. They have numerous features that can act together at different stages in the soil–plant–animal–atmosphere system, and these are most effective in mixed swards with a legume proportion of 30–50%. The resulting benefits include reduced dependence on fossil energy and industrial N-fertilizer, lower quantities of harmful emissions to the environment (greenhouse gases and nitrate), lower production costs, higher productivity and increased protein self-sufficiency. Some legume species offer opportunities for improving animal health with less medication, due to the presence of bioactive secondary metabolites. In addition, legumes may offer an adaptation option to rising atmospheric CO2 concentrations and climate change. Legumes generate these benefits at the level of the managed land-area unit and also at the level of the final product unit. However, legumes suffer from some limitations, and suggestions are made for future research to exploit more fully the opportunities that legumes can offer. In conclusion, the development of legume-based grassland–livestock systems undoubtedly constitutes one of the pillars for more sustainable and competitive ruminant production systems, and it can be expected that forage legumes will become more important in the future.

Journal ArticleDOI
TL;DR: The aim of this paper is to present some of the more important univariate and bivariate parametric and non-parametric statistical techniques and to highlight their uses based on practical examples in Food Science and Technology.

Journal ArticleDOI
TL;DR: It is concluded that, although crucial in enabling the identification of plant-derived carbon-utilising microbes, current technologies lack the high-throughput ability to quantitatively apportion carbon use by phylogentic groups and its use efficiency and destination within the microbial metabolome.
Abstract: It is well known that atmospheric concentrations of carbon dioxide (CO2) (and other greenhouse gases) have increased markedly as a result of human activity since the industrial revolution. It is perhaps less appreciated that natural and managed soils are an important source and sink for atmospheric CO2 and that, primarily as a result of the activities of soil microorganisms, there is a soil-derived respiratory flux of CO2 to the atmosphere that overshadows by tenfold the annual CO2 flux from fossil fuel emissions. Therefore small changes in the soil carbon cycle could have large impacts on atmospheric CO2 concentrations. Here we discuss the role of soil microbes in the global carbon cycle and review the main methods that have been used to identify the microorganisms responsible for the processing of plant photosynthetic carbon inputs to soil. We discuss whether application of these techniques can provide the information required to underpin the management of agro-ecosystems for carbon sequestration and increased agricultural sustainability. We conclude that, although crucial in enabling the identification of plant-derived carbon-utilising microbes, current technologies lack the high-throughput ability to quantitatively apportion carbon use by phylogentic groups and its use efficiency and destination within the microbial metabolome. It is this information that is required to inform rational manipulation of the plant–soil system to favour organisms or physiologies most important for promoting soil carbon storage in agricultural soil.

Journal ArticleDOI
TL;DR: In this article, the authors reviewed the scientific literature on airflow distribution systems and ventilation effectiveness to identify and assess the most suitable room air distribution methods for various spaces, and showed that the assessment of ventilation effectiveness or efficiency should be determined according to each task of the ventilation system, such as removing heat, removal of pollutant, supply fresh air to the breathing zone or protecting the occupant from cross infection.

Journal ArticleDOI
TL;DR: This paper describes a project that set out to summarize the natural science evidence base relevant to neonicotinoid insecticides and insect pollinators in as policy-neutral terms as possible.
Abstract: There is evidence that in Europe and North America many species of pollinators are in decline, both in abundance and distribution. Although there is a long list of potential causes of this decline, there is concern that neonicotinoid insecticides, in particular through their use as seed treatments are, at least in part, responsible. This paper describes a project that set out to summarize the natural science evidence base relevant to neonicotinoid insecticides and insect pollinators in as policy-neutral terms as possible. A series of evidence statements are listed and categorized according to the nature of the underlying information. The evidence summary forms the appendix to this paper and an annotated bibliography is provided in the electronic supplementary material.

Journal ArticleDOI
Kostas Tsigaridis1, Kostas Tsigaridis2, Nikos Daskalakis3, Nikos Daskalakis4, Maria Kanakidou3, Peter Adams5, Paulo Artaxo6, Ranjit Bahadur7, Yves Balkanski, Susanne E. Bauer1, Susanne E. Bauer2, Nicolas Bellouin8, Nicolas Bellouin9, Angela Benedetti10, Tommi Bergman11, Terje Koren Berntsen12, Johan P. Beukes13, Huisheng Bian14, Kenneth S. Carslaw15, Mian Chin16, Gabriele Curci17, Thomas Diehl18, Thomas Diehl16, Richard C. Easter19, Steven J. Ghan19, Sunling Gong20, Alma Hodzic21, Christopher R. Hoyle22, Christopher R. Hoyle23, Trond Iversen10, Trond Iversen24, Trond Iversen12, Shantanu H. Jathar5, Jose L. Jimenez25, Johannes W. Kaiser26, Alf Kirkevåg24, Dorothy Koch1, Dorothy Koch2, Harri Kokkola11, Y. H. Lee1, Y. H. Lee5, Guangxing Lin27, Xiaohong Liu28, Xiaohong Liu19, Gan Luo29, Xiaoyan Ma30, Xiaoyan Ma29, Graham Mann15, Nikos Mihalopoulos3, J.-J. Morcrette10, Jean-François Müller31, Gunnar Myhre12, Stelios Myriokefalitakis4, Stelios Myriokefalitakis3, Nga L. Ng32, D. O'Donnell11, D. O'Donnell26, Joyce E. Penner27, Luca Pozzoli33, Kirsty J. Pringle26, Kirsty J. Pringle15, Lynn M. Russell, Michael Schulz24, Jean Sciare, Øyvind Seland24, Drew Shindell2, Drew Shindell1, Drew Shindell34, Sanford Sillman27, Ragnhild Bieltvedt Skeie12, Dominick V. Spracklen15, Trissevgeni Stavrakou31, Stephen D. Steenrod18, Toshihiko Takemura35, Petri Tiitta13, Petri Tiitta36, Simone Tilmes21, Holger Tost37, T. P. C. van Noije38, P. G. van Zyl13, K. von Salzen30, Fangqun Yu29, Zhili Wang39, Rahul A. Zaveri19, Hualong Zhang39, Kai Zhang26, Kai Zhang19, Qi Zhang40, X. Zhang 
TL;DR: In this article, the current status of global modeling of the organic aerosol (OA) in the troposphere and analyzes the differences between models as well as between models and observations.
Abstract: . This paper evaluates the current status of global modeling of the organic aerosol (OA) in the troposphere and analyzes the differences between models as well as between models and observations. Thirty-one global chemistry transport models (CTMs) and general circulation models (GCMs) have participated in this intercomparison, in the framework of AeroCom phase II. The simulation of OA varies greatly between models in terms of the magnitude of primary emissions, secondary OA (SOA) formation, the number of OA species used (2 to 62), the complexity of OA parameterizations (gas-particle partitioning, chemical aging, multiphase chemistry, aerosol microphysics), and the OA physical, chemical and optical properties. The diversity of the global OA simulation results has increased since earlier AeroCom experiments, mainly due to the increasing complexity of the SOA parameterization in models, and the implementation of new, highly uncertain, OA sources. Diversity of over one order of magnitude exists in the modeled vertical distribution of OA concentrations that deserves a dedicated future study. Furthermore, although the OA / OC ratio depends on OA sources and atmospheric processing, and is important for model evaluation against OA and OC observations, it is resolved only by a few global models. The median global primary OA (POA) source strength is 56 Tg a−1 (range 34–144 Tg a−1) and the median SOA source strength (natural and anthropogenic) is 19 Tg a−1 (range 13–121 Tg a−1). Among the models that take into account the semi-volatile SOA nature, the median source is calculated to be 51 Tg a−1 (range 16–121 Tg a−1), much larger than the median value of the models that calculate SOA in a more simplistic way (19 Tg a−1; range 13–20 Tg a−1, with one model at 37 Tg a−1). The median atmospheric burden of OA is 1.4 Tg (24 models in the range of 0.6–2.0 Tg and 4 between 2.0 and 3.8 Tg), with a median OA lifetime of 5.4 days (range 3.8–9.6 days). In models that reported both OA and sulfate burdens, the median value of the OA/sulfate burden ratio is calculated to be 0.77; 13 models calculate a ratio lower than 1, and 9 models higher than 1. For 26 models that reported OA deposition fluxes, the median wet removal is 70 Tg a−1 (range 28–209 Tg a−1), which is on average 85% of the total OA deposition. Fine aerosol organic carbon (OC) and OA observations from continuous monitoring networks and individual field campaigns have been used for model evaluation. At urban locations, the model–observation comparison indicates missing knowledge on anthropogenic OA sources, both strength and seasonality. The combined model–measurements analysis suggests the existence of increased OA levels during summer due to biogenic SOA formation over large areas of the USA that can be of the same order of magnitude as the POA, even at urban locations, and contribute to the measured urban seasonal pattern. Global models are able to simulate the high secondary character of OA observed in the atmosphere as a result of SOA formation and POA aging, although the amount of OA present in the atmosphere remains largely underestimated, with a mean normalized bias (MNB) equal to −0.62 (−0.51) based on the comparison against OC (OA) urban data of all models at the surface, −0.15 (+0.51) when compared with remote measurements, and −0.30 for marine locations with OC data. The mean temporal correlations across all stations are low when compared with OC (OA) measurements: 0.47 (0.52) for urban stations, 0.39 (0.37) for remote stations, and 0.25 for marine stations with OC data. The combination of high (negative) MNB and higher correlation at urban stations when compared with the low MNB and lower correlation at remote sites suggests that knowledge about the processes that govern aerosol processing, transport and removal, on top of their sources, is important at the remote stations. There is no clear change in model skill with increasing model complexity with regard to OC or OA mass concentration. However, the complexity is needed in models in order to distinguish between anthropogenic and natural OA as needed for climate mitigation, and to calculate the impact of OA on climate accurately.

Journal ArticleDOI
TL;DR: In this paper, the authors summarized the recent progress and discussed some of the challenges for future advancement in the use of high-resolution numerical weather prediction (NWP) for nowcasting.
Abstract: Traditionally, the nowcasting of precipitation was conducted to a large extent by means of extrapolation of observations, especially of radar ref lectivity. In recent years, the blending of traditional extrapolation-based techniques with high-resolution numerical weather prediction (NWP) is gaining popularity in the nowcasting community. The increased need of NWP products in nowcasting applications poses great challenges to the NWP community because the nowcasting application of high-resolution NWP has higher requirements on the quality and content of the initial conditions compared to longer-range NWP. Considerable progress has been made in the use of NWP for nowcasting thanks to the increase in computational resources, advancement of high-resolution data assimilation techniques, and improvement of convective-permitting numerical modeling. This paper summarizes the recent progress and discusses some of the challenges for future advancement.

Journal ArticleDOI
Karani Santhanakrishnan Vimaleswaran1, Karani Santhanakrishnan Vimaleswaran2, Alana Cavadino1, Diane J. Berry1, Rolf Jorde3, Aida Karina Dieffenbach4, Chen Lu5, Alexessander Couto Alves6, Alexessander Couto Alves7, Hiddo J.L. Heerspink8, Emmi Tikkanen9, J. G. Eriksson10, Andrew Wong11, Massimo Mangino12, Kathleen A. Jablonski13, Ilja M. Nolte8, Denise K. Houston14, Tarunveer S. Ahluwalia15, Tarunveer S. Ahluwalia16, Peter J. van der Most8, Dorota Pasko17, Lina Zgaga18, Lina Zgaga19, Elisabeth Thiering20, Veronique Vitart19, Ross M. Fraser19, Jennifer E. Huffman19, Rudolf A. de Boer8, Ben Schöttker4, Kai-Uwe Saum4, Mark I. McCarthy21, Mark I. McCarthy22, Josée Dupuis5, Karl-Heinz Herzig7, Karl-Heinz Herzig23, Sylvain Sebert7, Anneli Pouta24, Anneli Pouta23, Jaana Laitinen25, Marcus E. Kleber26, Gerjan Navis8, Mattias Lorentzon10, Karen A. Jameson27, Nigel K Arden22, Nigel K Arden27, Jackie A. Cooper11, Jayshree Acharya11, Rebecca Hardy11, Olli T. Raitakari28, Olli T. Raitakari29, Samuli Ripatti9, Liana K. Billings, Jari Lahti9, Clive Osmond27, Brenda W.J.H. Penninx30, Lars Rejnmark31, Kurt Lohman14, Lavinia Paternoster32, Ronald P. Stolk8, Dena G. Hernandez24, Liisa Byberg33, Emil Hagström33, Håkan Melhus33, Erik Ingelsson34, Erik Ingelsson33, Erik Ingelsson21, Dan Mellström10, Östen Ljunggren33, Ioanna Tzoulaki6, Stela McLachlan19, Evropi Theodoratou19, Carla M. T. Tiesler20, Antti Jula24, Pau Navarro19, Alan F. Wright19, Ozren Polasek35, James F. Wilson19, Igor Rudan19, Veikko Salomaa24, Joachim Heinrich, Harry Campbell19, Jacqueline F. Price19, Magnus Karlsson36, Lars Lind33, Karl Michaëlsson33, Stefania Bandinelli, Timothy M. Frayling17, Catharina A. Hartman8, Thorkild I. A. Sørensen37, Thorkild I. A. Sørensen16, Stephen B. Kritchevsky14, Bente L. Langdahl31, Johan G. Eriksson, Jose C. Florez38, Tim D. Spector12, Terho Lehtimäki39, Diana Kuh11, Steve E. Humphries11, Cyrus Cooper27, Cyrus Cooper22, Claes Ohlsson10, Winfried März40, Winfried März41, Winfried März26, Martin H. de Borst8, Meena Kumari11, Mika Kivimäki11, Thomas J. Wang42, Chris Power1, Hermann Brenner4, Guri Grimnes3, Pim van der Harst8, Harold Snieder8, Aroon D. Hingorani11, Stefan Pilz41, John C. Whittaker43, Marjo-Riitta Järvelin, Elina Hyppönen1, Elina Hyppönen44 
TL;DR: In this article, the authors used a mendelian randomisation approach to test whether low plasma 25-hydroxyvitamin D (25[OH]D) concentration is causally associated with blood pressure and hypertension risk.

Journal ArticleDOI
TL;DR: WGS was as sensitive and specific as routine antimicrobial susceptibility testing methods and is a promising alternative to culture methods for resistance prediction in S. aureus and ultimately other major bacterial pathogens.
Abstract: Whole-genome sequencing (WGS) could potentially provide a single platform for extracting all the information required to predict an organism's phenotype. However, its ability to provide accurate predictions has not yet been demonstrated in large independent studies of specific organisms. In this study, we aimed to develop a genotypic prediction method for antimicrobial susceptibilities. The whole genomes of 501 unrelated Staphylococcus aureus isolates were sequenced, and the assembled genomes were interrogated using BLASTn for a panel of known resistance determinants (chromosomal mutations and genes carried on plasmids). Results were compared with phenotypic susceptibility testing for 12 commonly used antimicrobial agents (penicillin, methicillin, erythromycin, clindamycin, tetracycline, ciprofloxacin, vancomycin, trimethoprim, gentamicin, fusidic acid, rifampin, and mupirocin) performed by the routine clinical laboratory. We investigated discrepancies by repeat susceptibility testing and manual inspection of the sequences and used this information to optimize the resistance determinant panel and BLASTn algorithm. We then tested performance of the optimized tool in an independent validation set of 491 unrelated isolates, with phenotypic results obtained in duplicate by automated broth dilution (BD Phoenix) and disc diffusion. In the validation set, the overall sensitivity and specificity of the genomic prediction method were 0.97 (95% confidence interval [95% CI], 0.95 to 0.98) and 0.99 (95% CI, 0.99 to 1), respectively, compared to standard susceptibility testing methods. The very major error rate was 0.5%, and the major error rate was 0.7%. WGS was as sensitive and specific as routine antimicrobial susceptibility testing methods. WGS is a promising alternative to culture methods for resistance prediction in S. aureus and ultimately other major bacterial pathogens.

Journal ArticleDOI
TL;DR: It is shown that climate models simulate a robust global annual mean warming in the Holocene, mainly in response to rising CO2 and the retreat of ice sheets, and this model-data inconsistency demands a critical reexamination of both proxy data and models.
Abstract: A recent temperature reconstruction of global annual temperature shows Early Holocene warmth followed by a cooling trend through the Middle to Late Holocene [Marcott SA, et al., 2013, Science 339(6124):1198–1201]. This global cooling is puzzling because it is opposite from the expected and simulated global warming trend due to the retreating ice sheets and rising atmospheric greenhouse gases. Our critical reexamination of this contradiction between the reconstructed cooling and the simulated warming points to potentially significant biases in both the seasonality of the proxy reconstruction and the climate sensitivity of current climate models.

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TL;DR: The data suggest that CBDV antiepileptiform effects in the Mg(2+)-free model are not uniquely mediated via activation of TRPV1, and it is proposed that CBDv effects on TRP channels should be studied further in different in vitro and in vivo models of epilepsy.
Abstract: Epilepsy is the most common neurological disorder, with over 50 million people worldwide affected. Recent evidence suggests that the transient receptor potential cation channel subfamily V member 1 (TRPV1) may contribute to the onset and progression of some forms of epilepsy. Since the two nonpsychotropic cannabinoids cannabidivarin (CBDV) and cannabidiol (CBD) exert anticonvulsant activity in vivo and produce TRPV1-mediated intracellular calcium elevation in vitro, we evaluated the effects of these two compounds on TRPV1 channel activation and desensitization and in an in vitro model of epileptiform activity. Patch clamp analysis in transfected HEK293 cells demonstrated that CBD and CBDV dose-dependently activate and rapidly desensitize TRPV1, as well as TRP channels of subfamily V type 2 (TRPV2) and subfamily A type 1 (TRPA1). TRPV1 and TRPV2 transcripts were shown to be expressed in rat hippocampal tissue. When tested on epileptiform neuronal spike activity in hippocampal brain slices exposed to a Mg(2+)-free solution using multielectrode arrays (MEAs), CBDV reduced both epileptiform burst amplitude and duration. The prototypical TRPV1 agonist, capsaicin, produced similar, although not identical effects. Capsaicin, but not CBDV, effects on burst amplitude were reversed by IRTX, a selective TRPV1 antagonist. These data suggest that CBDV antiepileptiform effects in the Mg(2+)-free model are not uniquely mediated via activation of TRPV1. However, TRPV1 was strongly phosphorylated (and hence likely sensitized) in Mg(2+)-free solution-treated hippocampal tissue, and both capsaicin and CBDV caused TRPV1 dephosphorylation, consistent with TRPV1 desensitization. We propose that CBDV effects on TRP channels should be studied further in different in vitro and in vivo models of epilepsy.

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TL;DR: The self‐assembly of several classes of amphiphilic peptides is reviewed, and selected applications are discussed, and the influence of environmental variables such as pH and temperature on aggregate nanostructure is discussed.
Abstract: The self-assembly of several classes of amphiphilic peptides is reviewed, and selected applications are discussed. We discuss recent work on the self-assembly of lipopeptides, surfactant-like peptides and amyloid peptides derived from the amyloid-β peptide. The influence of environmental variables such as pH and temperature on aggregate nanostructure is discussed. Enzyme-induced remodelling due to peptide cleavage and nanostructure control through photocleavage or photo-cross-linking are also considered. Lastly, selected applications of amphiphilic peptides in biomedicine and materials science are outlined. © 2014 The Authors. Journal of Peptide Science published by European Peptide Society and John Wiley & Sons, Ltd.

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TL;DR: An overview of the current state of the field, in terms of key research developments and candidate neural mechanisms receiving focused investigation as potential sources of motivation–cognition interaction, and a set of pressing research questions calling for this sort of cross-disciplinary approach.
Abstract: Recent years have seen a rejuvenation of interest in studies of motivation–cognition interactions arising from many different areas of psychology and neuroscience The present issue of Cognitive, Affective, & Behavioral Neuroscience provides a sampling of some of the latest research from a number of these different areas In this introductory article, we provide an overview of the current state of the field, in terms of key research developments and candidate neural mechanisms receiving focused investigation as potential sources of motivation–cognition interaction However, our primary goal is conceptual: to highlight the distinct perspectives taken by different research areas, in terms of how motivation is defined, the relevant dimensions and dissociations that are emphasized, and the theoretical questions being targeted Together, these distinctions present both challenges and opportunities for efforts aiming toward a more unified and cross-disciplinary approach We identify a set of pressing research questions calling for this sort of cross-disciplinary approach, with the explicit goal of encouraging integrative and collaborative investigations directed toward them

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TL;DR: In this paper, the authors investigated the differential impact that various dimensions of corporate social performance have on the pricing of corporate debt as well as the assessment of the credit quality of specific bond issues and concluded that good performance is rewarded and corporate social transgressions are penalized through lower and higher corporate bond yield spreads, respectively.
Abstract: This study investigates the differential impact that various dimensions of corporate social performance have on the pricing of corporate debt as well as the assessment of the credit quality of specific bond issues. The empirical analysis, based on an extensive longitudinal data set, suggests that overall, good performance is rewarded and corporate social transgressions are penalized through lower and higher corporate bond yield spreads, respectively. Similar conclusions can be drawn when focusing on either the bond rating assigned to a specific debt issue or the probability of it being considered to be an asset of speculative grade.

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TL;DR: The value of insect pollination to UK apple production may have previously been underestimated and it is important to consider variety when valuing ecosystem services such aspollination to agricultural production.

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TL;DR: River flow simulations from nine global hydrology and land surface models are used to explore uncertainties in the potential impacts of climate change on flood hazard at global scale, indicating large modeling uncertainty which needs to be taken into account in local adaptation studies.
Abstract: Climate change due to anthropogenic greenhouse gas emissions is expected to increase the frequency and intensity of precipitation events, which is likely to affect the probability of flooding into the future. In this paper we use river flow simulations from nine global hydrology and land surface models to explore uncertainties in the potential impacts of climate change on flood hazard at global scale. As an indicator of flood hazard we looked at changes in the 30-y return level of 5-d average peak flows under representative concentration pathway RCP8.5 at the end of this century. Not everywhere does climate change result in an increase in flood hazard: decreases in the magnitude and frequency of the 30-y return level of river flow occur at roughly one-third (20–45%) of the global land grid points, particularly in areas where the hydrograph is dominated by the snowmelt flood peak in spring. In most model experiments, however, an increase in flooding frequency was found in more than half of the grid points. The current 30-y flood peak is projected to occur in more than 1 in 5 y across 5–30% of land grid points. The large-scale patterns of change are remarkably consistent among impact models and even the driving climate models, but at local scale and in individual river basins there can be disagreement even on the sign of change, indicating large modeling uncertainty which needs to be taken into account in local adaptation studies.

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TL;DR: In this article, the authors investigate the replication of Grassroots innovations in different contexts with the aim to uncover general patterns of success and failure, and identify questions for future research, and find that less successful transition initiatives might underestimate the importance of contextual factors and material resources in influencing success.
Abstract: Grassroots innovations emerge as networks generating innovative solutions for climate change adaptation and mitigation. However, it is unclear if grassroots innovations can be successful in responding to climate change. Little evidence exists on replication, international comparisons are rare, and research tends to overlook discontinued responses in favour of successful ones. We take the Transition Movement as a case study of a rapidly spreading transnational grassroots network, and include both active and non-active local transition initiatives. We investigate the replication of grassroots innovations in different contexts with the aim to uncover general patterns of success and failure, and identify questions for future research. An online survey was carried out in 23 countries (N=276). The data analysis entailed testing the effect of internal and contextual factors of success as drawn from the existing literature, and the identification of clusters of transition initiatives with similar internal and contextual factor configurations. Most transition initiatives consider themselves successful. Success is defined along the lines of social connectivity and empowerment, and external environmental impact. We find that less successful transition initiatives might underestimate the importance of contextual factors and material resources in influencing success. We also find that their diffusion is linked to the combination of local-global learning processes, and that there is an incubation period during which a transition initiative is consolidated. Transition initiatives seem capable of generalising organisational principles derived from unique local experiences that seem to be effective in other local contexts. However, the geographical locations matter with regard to where transition initiatives take root and the extent of their success, and ‘place attachment’ may have a role in the diffusion of successful initatives. We suggest that longitudinal comparative studies can advance our understanding in this regard, as well as inform the changing nature of the definition of success at different stages of grassroots innovation development, and the dynamic nature of local and global linkages.