University of Rennes

About: University of Rennes is a education organization based out in Rennes, France. It is known for research contribution in the topics: Population & Catalysis. The organization has 18404 authors who have published 40374 publications receiving 995327 citations.

Superpixel-Based Spatiotemporal Saliency Detection

Abstract: This paper proposes a superpixel-based spatiotemporal saliency model for saliency detection in videos. Based on the superpixel representation of video frames, motion histograms and color histograms are extracted at the superpixel level as local features and frame level as global features. Then, superpixel-level temporal saliency is measured by integrating motion distinctiveness of superpixels with a scheme of temporal saliency prediction and adjustment, and superpixel-level spatial saliency is measured by evaluating global contrast and spatial sparsity of superpixels. Finally, a pixel-level saliency derivation method is used to generate pixel-level temporal and spatial saliency maps, and an adaptive fusion method is exploited to integrate them into the spatiotemporal saliency map. Experimental results on two public datasets demonstrate that the proposed model outperforms six state-of-the-art spatiotemporal saliency models in terms of both saliency detection and human fixation prediction.

Rapid structural and epigenetic reorganization near transposable elements in hybrid and allopolyploid genomes in Spartina

Abstract: Summary • Transposable elements (TE) induce structural and epigenetic alterations in their host genome, with major evolutionary implications. These alterations are examined here in the context of allopolyploid speciation, on the recently formed invasive species Spartina anglica, which represents an excellent model to contrast plant genome dynamics following hybridization and genome doubling in natural conditions. • Methyl-sensitive transposon display was used to investigate the structural and epigenetic dynamics of TE insertion sites for several elements, and to contrast it with comparable genome-wide methyl-sensitive amplified polymorphism analyses. • While no transposition burst was detected, we found evidence of major structural and CpG methylation changes in the vicinity of TE insertions accompanying hybridization, and to a lesser extent, genome doubling. Genomic alteration appeared preferentially in the maternal subgenome, and the environment of TEs was specifically affected by large maternal-specific methylation changes, demonstrating that TEs fuel epigenetic alterations at the merging of diverged genomes. • Such genome changes indicate that nuclear incompatibilities in Spartina trigger immediate alterations, which are TE-specific with an important epigenetic component. Since most of this reorganization is conserved after genome doubling that produced a fertile invasive species, TEs certainly play a central role in the shockinduced dynamics of the genome during allopolyploid speciation.