Showing papers in "Animal Conservation in 2000"
TL;DR: In this article, the impact of people upon predators is analysed by relating local carnivore extinctions to past and projected human population densities, showing strong associations between high human density and the loss of carnivore populations from a region.
Abstract: The current extinction crisis is caused primarily by human impacts upon wild populations Large carnivores are especially sensitive to human activity; because their requirements often conflict with those of local people, predators have been actively persecuted in most regions of the world In this paper, the impact of people upon predators is analysed by relating local carnivore extinctions to past and projected human population densities There are strong associations between high human density and the loss of carnivore populations from a region Interspecific variation in ability to survive at high human densities probably reflects species' ability to adapt to human-modified habitats However, regional and temporal variation in individual species' sensitivity to human density is more likely to reflect the activities of local people than the phenotypes of local carnivores Local culture, government policy and international trade all influence human attitudes to predators and, therefore, the impact of people upon carnivore populations The importance of these factors may mean that extinction risks for carnivores will continue to increase, even though human population growth is projected to deccelerate during the new millennium This points to an urgent need for techniques to resolve conflicts between people and predators at either the local or landscape level
687 citations
TL;DR: It is confirmed that marine reserves benefit fish populations and the need for monitoring prior to reserve establishment is highlighted to provide more accurate, habitat-controlled studies of the effects of marine reserves on fish populations.
Abstract: We synthesize the results of empirical studies of marine reserves to assess the potential benefits of protection for fish populations. Our meta-analyses demonstrate that the overall abundance of fishes inside reserves is, on average, 3.7 times higher than outside reserve boundaries. This enhancement is mainly a result of a significant increase in abundance of species that are the target of fisheries. Non-target species are equally abundant inside and outside reserves. Large-bodied species also respond more to protection, irrespective of their fishery status. Species within genera show great heterogeneity in their response to protection despite similarities in their life histories. Our study confirms that marine reserves benefit fish populations and highlights the need for monitoring prior to reserve establishment to provide more accurate, habitat-controlled studies of the effects of marine reserves on fish populations.
272 citations
TL;DR: Simulations of populations sampled for the purpose of estimating population size concluded that only highly polymorphic loci that are critical for the identification of the individual should be used in molecular tagging, and considerable efforts should be made to minimize errors in genotype determination.
Abstract: Although capture–recapture techniques are often used to estimate population size, these approaches are difficult to implement for a wide variety of species Highly polymorphic microsatellite markers are useful in individual identification, and these ‘molecular tags’ can be collected without having to capture or trap the individual However, several sources of error associated with molecular identification techniques, including failure to identify individuals with the same genotype for these markers as being different, and incorrect assignment of individual genotypes, could bias population estimates Simulations of populations sampled for the purpose of estimating population size were used to assess the extent of these potential biases Population estimates tended to be biased downward as the likelihood of individuals sharing the same genotype increased (as measured by the probability of identity (PI) of the multi-locus genotype); this bias increased with population size Populations of 1000 individuals were underestimated by ≥5% when the PI was as small as 14 × 10−7 A similar-sized bias did not occur for populations of 50 individuals until the PI had increased to approximately 25 × 10−5 Errors in genotype assignment resulted in overestimates of population size; this problem increased with the number of samples and loci that were genotyped Population estimates were often >200% the size of the simulated populations when the probability of making a genotyping error was 005/locus and 7–10 loci were used to identify individuals This bias was substantially reduced by decreasing genotyping error rate to 0005 If possible, only highly polymorphic loci that are critical for the identification of the individual should be used in molecular tagging, and considerable efforts should be made to minimize errors in genotype determination
195 citations
TL;DR: In order to succeed in representing many mammals and birds in area selection, it is not sufficient for the groups used for selection to occur in many different eco-regions, they must also have low overlaps in distribution so as to provide high ecological complementarity.
Abstract: More biodiversity could be protected in situ if the few species that attract the most popular support (the ‘flagship’ species) had distributions that also covered the broader diversity of organisms. We studied how well different groups of mammals performed for representing the diversity of mammals and breeding birds among 1° areas of sub-Saharan Africa. We demonstrate that choosing areas of sub-Saharan Africa using either conservationists' six primary flagship mammals, or the six ‘Big Five’ mammals popular with wildlife tourists, is not significantly better for representing the diversity of mammals and birds than choosing areas at random. Furthermore, neither of these groups is significantly better for representing the diversity of mammals and birds than groups of the same number of species chosen at random. We show that in order to succeed in representing many mammals and birds in area selection, it is not sufficient for the groups used for selection to occur in many different eco-regions, they must also have low overlaps in distribution, so as to provide high ecological complementarity (a similar pattern of ecological complementarity must be shared by the larger group of species to be represented). Therefore there may be a need for an explicit policy to balance the requirements of flagship conservation and broader biodiversity conservation, which will have implications for the distribution of resources.
187 citations
TL;DR: Outbreeding depression may be more common in vertebrates than previously supposed, and conservation strategies that seek to maximize the genetic diversity of managed populations may risk mixing lineages that are sufficiently differentiated to cause outbreeding depression among descendants.
Abstract: In most species the offspring of closely related parents have reduced fitness compared with the offspring of unrelated parents, a phenomenon known as inbreeding depression. However if parents are very distantly related, their offspring may also have reduced fitness. This pattern, outbreeding depression, has been most commonly observed in plants and only rarely in animals. Here we examine the consequences of inbreeding and outbreeding on juvenile survival of reintroduced Arabian oryx (Oryx leucoryx) in Oman, a population with a small number of founders drawn from a number of sources. Using microsatellite-based measures of inbreeding and outbreeding, there was no apparent relationship between inbreeding or outbreeding and survival when inbreeding and outbreeding were tested in separate statistical models. However when inbreeding and outbreeding were tested in the same statistical model, we found simultaneous inbreeding depression and outbreeding depression acting on juvenile survival. Outbreeding depression may be more common in vertebrates than previously supposed, and conservation strategies that seek to maximize the genetic diversity of managed populations may risk mixing lineages that are sufficiently differentiated to cause outbreeding depression among descendants.
169 citations
TL;DR: This work extends a recent challenge to the widely adopted one migrant per generation rule, which refers to the supposedly requisite number of immigrants, by showing that as temporal fluctuation in population size (FPS) increases, so too does the required number of migrants.
Abstract: Small isolated populations may face an increasing risk of extinction due to the loss of genetic diversity. This increasing risk, though, may be offset by gene flow, provided the population receives an adequate number of migrants per generation. We show that as temporal fluctuation in population size (FPS) increases, so too does the required number of immigrants. This increase in the requisite number of immigrants arises because the ratio of census size to effective population size decreases with increasing FPS. Because all populations fluctuate, our work extends a recent challenge to the widely adopted one migrant per generation rule, which refers to the supposedly requisite number of immigrants. In a sample of 44 animal populations, ˜60% of the populations fluctuated enough to require >10 immigrants per generation to avoid a substantial loss of genetic diversity, and ˜25% fluctuated enough to require >20 immigrants per generation. We thus recommend that estimation of the requisite number of immigrants take into account fluctuation in population size.
141 citations
TL;DR: Environmental stress seemed to override handling stress in determining the level of early survival for translocated wild rabbits and females survived better when acclimatized, while males showed the opposite tendency.
Abstract: Translocation is an important tool in conservation biology. However, translocation success is generally low for numerous animal species, therefore experiments are required for improvement. We carried out an experimental translocation of European wild rabbits (Oryctolagus cuniculus). The results may be of great interest for conservation biology, although we used a common species. As rabbits are known to experience a high mortality during the first days following release, it was necessary to assess the influence of handling trauma and environment novelty, respectively, and ways of suppressing them. Both tranquillization treatment during handling and a ‘soft’ release protocol (acclimatization pens in the new territory) were tested. Tranquillization did not increase survival, while the effect of acclimatization depended on sex. Females survived better when acclimatized, while males showed the opposite tendency. This difference is discussed in terms of sex-specific social behaviour, which is possibly an important correlate of translocation success. Finally, environmental stress seemed to override handling stress in determining the level of early survival for translocated wild rabbits.
137 citations
TL;DR: The results suggest that habitat fragmentation and destruction, as well as increased human pressure, increase the effects of inverse density dependence, and direct and indirect anthropogenic effects may be more detrimental to obligate co-operative breeders than to other species.
Abstract: The current decline of the highly endangered African wild dog (Lycaon pictus) may be partly due to the population dynamics induced by their social system. African wild dogs are obligate co-operators, and their need for helpers could generate inverse density dependence at the pack level. We show, through a mathematical model, that this can create an Allee effect, leading to a lower population size and a higher risk of population extinction, compared to populations with direct density dependence. This is due to three different processes. All three processes can increase population extinction individually and probably occur simultaneously in African wild dogs. First, inverse density dependence causes significantly higher rates of pack extinction. Second, it also increases the probability of failure to colonize territories by founders. Third, the Allee effect at the pack level (with a critical number of individuals), generates an Allee effect at the population level (with a critical number of packs). These three processes are likely to apply to other obligate co-operative breeders. Furthermore, our results suggest that habitat fragmentation and destruction, as well as increased human pressure, increase the effects of inverse density dependence. Direct and indirect anthropogenic effects may thus be more detrimental to obligate co-operative breeders than to other species.
131 citations
TL;DR: A number of species were found to be rare, were exploited and had highly restricted ranges overlapping areas where reef degradation is particularly severe, placing them at a high risk of extinction.
Abstract: Coral reefs are the most diverse ecosystem in the sea. Throughout the world they are being over-fished, polluted and destroyed, placing biodiversity at risk. To date, much of the concern over biodiversity loss has centred on local losses and the possibility of global extinction has largely been discounted. However, recent research has shown that 24% of reef fish species have restricted ranges (< 800 000 km2), with 9% highly restricted (< 50 000 km2). Restricted-range species are thought to face a greater risk of extinction than more widespread species since local impacts could cause global loss. We searched for information on status in the wild and characteristics of 397 restricted-range reef fish species. Fish body size, habitat requirements and usefulness to people were compared with those of a taxonomically-matched sample of more widespread species. We found that on average species with restricted ranges were significantly smaller (mean total length 19.1 cm versus 24.4 cm), tended to have narrower habitat requirements and were less used by people. Greater habitat specificity will tend to increase extinction risk while, if real, more limited usefulness (equivalent to exploitation) may reduce risk. Fifty-eight percent of restricted-range species were considered common/abundant in the wild and 42% uncommon/rare. Population status and threats to 319 species for which data were available were assessed according to the categories and criteria of the IUCN red list of threatened animals. A number of species were found to be rare, were exploited and had highly restricted ranges overlapping areas where reef degradation is particularly severe, placing them at a high risk of extinction. Five species were listed as Critically Endangered, two of them possibly already extinct in the wild, one as Endangered and 172 as Vulnerable. A further 126 species fell into Lower Risk categories and 11 were considered Data Deficient. Given the intensity of impacts to reefs, the broad geographical areas affected and the large numbers of restricted-range species, global extinctions seem likely. Urgent management action is now crucial for the survival of several species of reef fishes.
127 citations
TL;DR: In this article, the authors conducted 220 ten minute, 25 m radius point counts for birds in cacao plantations in the state of Tabasco, Mexico and detected 1550 individuals from 81 species.
Abstract: We surveyed birds in cacao (Theobroma cacao) plantations in the state of Tabasco, Mexico. The shade canopy was planted by farmers and consisted of approximately 60 species of trees with no single dominant species. Canopy height averaged 15 m and the structure was multi-storied. We conducted 220 ten minute, 25 m radius point counts for birds and detected 1550 individuals from 81 species. The average number of birds/point and the expected diversity in a fixed number of individuals within the cacao surveyed were well within the range of other lowland habitats, including agricultural sites, that we have surveyed previously in neighbouring Chiapas. In the Tabascan cacao, the migrant group was composed, in part, of forest species, and dimorphic species were represented primarily by males, which in other areas are known to dominate forest or forest-like habitats. In contrast to the composition of migrant species, we found few resident forest specialists in Tabascan cacao. Instead, the tropical resident group was composed of large-bodied generalist species that use small patches of trees in open habitats. These results (moderate diversity, low numbers of forest specialists) differ from the few studies completed in ‘rustic’ cacao systems located near large tracts of forest. The planted shade cacao agroecosystem – at least in the absence of nearby forest – may have a limited value for conserving lost tropical forest bird diversity, but it provides habitat for woodland-associated migratory species. Our results also indicate that the planted shade cacao plantations supported few small omnivorous or frugivorous species, probably because cacao itself, as well as the dominant shade trees, produce primarily mammal or wind dispersed fruit and seeds.
123 citations
TL;DR: It is postulate that the grey squirrel may act as a reservoir host for the parapoxvirus and be a source of infection for red squirrels.
Abstract: The population of red squirrels (Sciurus vulgaris) in the British Isles is in decline and is being supplanted by the grey squirrel (Sciurus carolinensis). It has been suggested that parapoxvirus-associated disease has caused significant mortality in red squirrels and that grey squirrels are the source of the virus. A direct enzyme-linked immunosorbent assay (ELISA) was developed for the measurement of antibody to squirrel parapoxvirus. We tested 140 sera from red squirrels and 223 from grey squirrels from different populations in the UK. A high percentage (61%) of apparently healthy grey squirrels, were found to have been exposed to the parapoxvirus. Only 2.86% (4/140) of red squirrels had antibody and three of these animals had parapoxvirus-associated disease. We postulate that the grey squirrel may act as a reservoir host for the virus.
TL;DR: Using Monte Carlo simulations (rather than binomial statistics), this work finds taxonomic patterns in the risk of extinction and probability of successful introduction among birds.
Abstract: Biotic homogenization is seen as the consequence of preferential loss of native species followed by ecological replacement with widespread exotics. Homogenization is not random in its effects on higher taxa. Using Monte Carlo simulations (rather than binomial statistics) we find taxonomic patterns in the risk of extinction and probability of successful introduction among birds. Sixteen avian families selectively contain extinct or threatened birds. Eight avian families selectively contain successfully introduced birds. Eight of these 24 taxonomically selected families have not been identified in previous studies, presumably because they are species-poor. The 22 living taxonomically selected families are classified into four homogenization categories. These categories reflect how extinction and invasion are combining in their effects at the family level. Range size, as indexed by island endemism, and human influence are the primary forces driving taxonomic homogenization patterns among birds. There is no evidence that evolutionary age influences homogenization patterns. Phylogenetic comparative analyses, which explicitly recognize the role of human influence, are needed to elucidate more detailed ecological correlates to homogenization trends.
TL;DR: It is predicted that many captive populations will prove similar to the California condor population in that it will prove inadvisable or impractical to select against one or more deleterious alleles detected in the population.
Abstract: Five out of 169 fertile California condor (Gymnogyps californianus) eggs laid in captivity have exhibited chondrodystrophy, a lethal form of dwarfism. Pedigree records indicate that this chondrodystrophy, like similar conditions in chickens, turkeys and quail, is probably inherited as an autosomal, recessive allele. We estimate that the frequency of this putative allele is about 9%. This high frequency is probably due to a founder effect. We consider three management options for the allele: ignoring it, eliminating it by selection and minimizing its phenotypic manifestation by avoiding matings between possible carriers. We recommend minimizing its phenotypic expression because an unacceptably large proportion of condors (up to 78 out of 146) would be prevented from breeding under a selection strategy designed to eliminate the allele. We predict that many captive populations will prove similar to the California condor population in that it will prove inadvisable or impractical to select against one or more deleterious alleles detected in the population.
TL;DR: Social groups were cryptic because foraging ranges of groups overlapped, bats belonging to each group spread over many roosts each day, and these roost sites changed from day to day.
Abstract: Population structure of the threatened long-tailed bat ( Chalinolobus tuberculatus) was studied over five summers between 1993 and 1998, in temperate Nothofagus rainforest in Fiordland, New Zealand. Composition of 95 communal groups was sampled and spatial distribution of individually marked bats investigated. Individual C. tuberculatus moved to new roost sites virtually every day. Long term non-random associations among individuals were found by a cluster analysis that revealed three distinct social groups. Groups contained on average 72.0 (± 26.0) (mean ± SD), 99.3 (± 19.0) and 131.7 (± 16.5) marked individuals/year. Collective foraging ranges of the three groups overlapped but roosting occurred in three geographically distinct adjacent areas. Only 1.6% of individuals switched between groups. Non-reproductive females and males switched between groups more often than reproductive females but individuals switched only once or twice during the study and then just for one night. Juveniles of both sexes were associated with their natal group as 1 year-olds and then later when breeding. Social groups were cryptic because foraging ranges of groups overlapped, bats belonging to each group spread over many roosts each day, and these roost sites changed from day to day. Bats moved infrequently between groups, potentially linking the local population assemblages. Future research should explore whether the population is structured in demes. Population structure did not conform to traditional metapopulation models because groups occurred in homogeneous habitat extending over a large geographical area. Conserving bat populations should entail preserving a representative number of subgroups but development of models for predicting minimum number of effective local populations is still required.
TL;DR: In this article, the authors compared the fitness and rates of extinction among populations of the housefly, Musca domestica L, kept either at constant effective sizes of 50, 500 or 1500 or passed through extreme founder events reducing effective size to 5.
Abstract: Fitness and rates of extinction were compared among populations of the housefly, Musca domestica L., kept either at constant effective sizes of 50, 500 or 1500 or passed through extreme founder events reducing effective size to 5. Populations were maintained for 24 generations, which for small to medium-sized mammals would be less than the 200 years suggested by Soule et al. (1986) as necessary for maintaining viable populations of endangered species. The results demonstrate that effective population sizes have to be greater than the 50 individuals suggested by Franklin (1980) to retain fitness and escape extinction, even in the short term. In contrast to populations of constant size that exhibited monotonic decreases in fitness through time, populations established with few founders rebounded from initial inbreeding depression. However, they were less adaptable to environmental stress than constant size populations, suggesting that populations founded with few numbers may do well within a single environment but may do far less well if they are reintroduced to natural environments or exposed to rapid environmental changes.
TL;DR: In this paper, the authors compared bird assemblages between forests with different housing densities in western Massachusetts and found that ground/shrub nesting birds as a group, and of individual species such as veery (Catharus fuscescens), ovenbird (Seiurus aurocapillus) and wood thrush (Hylocichla mustelina), were greater in forest of low housing density, but blue jays (Cyanocitta cristata) were more abundant in forests of moderate housing density.
Abstract: In rural New England, forest fragmentation is caused by housing developments in forested areas. To evaluate the effects of these changes on forest birds, we compared bird assemblages between forests with different housing densities in western Massachusetts. Species occurrences and relative abundances were determined from systematic point count surveys and mist-netting at three plots in forest of low housing density (0–0.05 houses/ha) and of moderate housing density (0.60–6.70 houses/ha) in 1993 and 1994. Among guilds, Neotropical migrants and forest-interior species had significantly lower abundances in forests of moderate housing density. Abundances of ground/shrub nesting birds as a group, and of individual species such as veery (Catharus fuscescens), ovenbird (Seiurus aurocapillus) and wood thrush (Hylocichla mustelina), were greater in forest of low housing density, but blue jays (Cyanocitta cristata) were more abundant in forest of moderate housing density. Although the abundances of ground/shrub nesting birds were positively related to ground cover, this vegetation structure did not differ between forest types. Avian and mammalian nest predators may be responsible for the trends in bird abundance. Avian nest predators may recognize forest of moderate housing density as edge habitat, and this rural development may also support relatively high densities of mammalian nest predators. These trends suggest that birds of New England's relatively extensive forests may be subject to greater fragmentation effects than generally thought, as a result of increasing rural housing development within forests.
TL;DR: Using a phylogeny of 35 representative crayfish based on 16 S rDNA sequence data, both methods agreed that the north-west coast of Tasmania and the south-eastern portion of the continent were of highest priority for conserving the greatest amount of diversity.
Abstract: There are many methods available for evaluating conservation priorities. Traditional methods of species richness, genus richness and critical species counts were compared with newer methods of phylogenetic and genetic diversity. Conservation priorities for areas designated by the Interim biogeographic regionalisation for Australia (Thackway & Cresswell, 1995) were assessed on the basis of the freshwater crayfish fauna of Australia. Distributions for all crayfish species were taken from the literature, and plotted in the IBRA areas. Species and genus richness, as well as the number of rare or endangered species were calculated for each area. A phylogeny of 35 representative crayfish based on 16 S rDNA sequence data was used to assess phylogenetic and genetic diversity of species and genera. Methods of species richness and phylogenetic diversity agreed to a large extent in their ranking of areas, both methods agreed that the north-west coast of Tasmania and the south-eastern portion of the continent were of highest priority for conserving the greatest amount of diversity. These results differ greatly from high priority areas based on other taxonomic groups, emphasizing the importance of broad taxonomic and ecological sampling in making conservation decisions.
TL;DR: An endangered beetle restricted to hollow trees, Osmoderma eremita, was surveyed in stands of different size, isolation and physical characteristics in an area in south-eastern Sweden, and the presence/absence of fragments of adult body parts was used to infer habitat occupancy.
Abstract: Osmoderma eremita , an endangered beetle restricted to hollow trees, was surveyed in stands of different size, isolation and physical characteristics in an area in south-eastern Sweden. To infer habitat occupancy the presence/absence of fragments of adult body parts was used. Mark–release–recapture of adults with pitfall traps set in tree hollows was carried out to estimate local population size. Habitat occupancy/tree was higher in larger stands than in smaller stands, but there was no correlation between occupancy/stand and isolation of stands. This suggests dispersal is important in the population processes within stands, but not between stands. Osmoderma eremita was found in most of the larger stands and this probably mirrors the fact that the density of old-growth oaks has been much higher in the area than today. Habitat fragmentation over the last two centuries has disrupted the network of habitat patches, thus preventing dispersal into smaller, younger stands. A minimum number of suitable trees aggregated in stands seems to be necessary to provide long-term viability of local O. eremita populations. To preserve viable O. eremita populations, it is therefore necessary to increase size and connectivity of stands with hollow trees.
TL;DR: Habitat selection by translocated black howler monkeys (Alouatta pigra) was studied in Belize, Central America and ranging patterns may be affected by patterns of food availability.
Abstract: Habitat selection by translocated black howler monkeys (Alouatta pigra) was studied in Belize, Central America. Ranging patterns of two recently translocated groups were contrasted with those of two groups in the same area with established home ranges, on a yearly and monthly basis. All groups concentrated their activities along stream beds at elevations below 200 m. Newly translocated groups increased the percentage of their monthly ranges in riverine areas (within 100 m of a water source) over the year of the study (with the exception of the last month) while established groups did not. Areas used more than five times by the monkeys contained larger trees and a greater relative coverage of major food species than low-use areas even though they had a lower overall species richness and diversity. These monkeys may be selecting habitat within the forest based upon vegetative differences and ranging patterns may be affected by patterns of food availability.
TL;DR: Differences in diet and overwinter survival of calves over the bison’s range suggest that intraspecific competition for food provided the stimulus for range expansion, and the reintroduction of animals into several independent sites in their historic range would facilitate recolonization and achieve a faster spread.
Abstract: We document the recolonization of an indigenous large herbivore into its historic range. Eighteen wood bison (Bison bison athabascae) were reintroduced into the Mackenzie Bison Sanctuary of the Northwest Territories, Canada, in 1963. The population subsequently increased in number and range, peaking at about 2400 in 1989; numbers were estimated at about 1900 in 1998. Recolonization occurred through a series of increases in local areas followed by pulses of dispersal and range expansion. This pattern was originally described for exotic species’ introductions. Differences in diet and overwinter survival of calves over the bison’s range suggest that intraspecific competition for food provided the stimulus for range expansion. For a conservation strategy, the reintroduction of animals into several independent sites in their historic range would facilitate recolonization and achieve a faster spread than a reintroduction into one site followed by waiting for the population to spread as a result of its own density dependent responses.
TL;DR: This cycle is regarded as representative of the numerous glacial cycles that span the evolutionary history of the tiger since its appearance in the fossil record about two million years ago, thereby giving a deep‐time perspective.
Abstract: The number of tiger subspecies is a major conservation issue that is difficult to resolve owing to small fragmented extant populations and limited historical samples in museums, which compromise the rigour of both molecular and morphological taxonomic studies. Rather than considering a static taxonomic approach to geographical variation in the tiger, we consider the changing biogeographical range of the tiger through the last glacial-interglacial cycle, based on habitat associations of modern tiger specimen records, and environmental reconstructions from the Last Glacial Maximum (LGM; approximately 20000 years before present (B.P.)). We regard this cycle as representative of the numerous glacial cycles that span the evolutionary history of the tiger since its appearance in the fossil record about two million years ago, thereby giving a deep-time perspective. The key issue is to determine the extent to which ancestral populations of the tiger were geographically isolated. If no geographical isolation is likely, and gene flow between tiger populations could be maintained until modern times, then diagnosably distinct populations could not have evolved. Our reconstructions show that only two tiger populations were likely to have experienced significant geographical isolation from the main species distribution; these were to the west of Tibet (during the LGM) and on Japan (throughout the glacial cycle). In addition, the LGM is likely to have seen the partial separation of peninsular Malayan and Sunda Islands tigers from mainland populations. From a biogeographical perspective it seems probable that only three contemporary populations were sufficiently separated for the evolution of distinct populations, which can be regarded as subspecies or evolutionary significant units. Therefore, most variation in modern tiger populations is probably clinal, which has important implications for future conservation strategies both in the wild and in captivity.
TL;DR: In this article, the influence of incorporating a land use constraint (LUC) into a conservation area selection algorithm, while taking cognizance of the existing reserve system, was investigated.
Abstract: Anthropogenic natural habitat transformation presents the single most important threat to global biodiversity Land cover data, based on Landsat Thematic Mapper (TM) imagery, were used to derive land use information for the Gauteng, Mpumalanga and Northern provinces of South Africa The assessment integrated land use data with species presence data (15 × 15 minute grid cell resolution) for butterflies, mammals, birds and endemic vascular plants The objectives of the present study were: (1) to identify areas at a regional scale where there is a possible conflict between biodiversity conservation interests and current land uses; (2) to investigate the influence of incorporating a land use constraint (LUC) into a conservation area selection algorithm, while taking cognizance of the existing reserve system; (3) to investigate the circumstances of species recorded within these conflict areas Many grid cells identified as species richness hotspots, rarity hotspots or as part of the complementary network selected by the unconstrained algorithm were in reality largely transformed or modified These areas should thus be avoided when striving to identify a viable conservation network Although the LUC algorithm selected more grid cells to represent all species, it succeeded in increasing the percentage of natural vegetation within the selected conservation network and highlighted areas where potential conflicts should be thoroughly investigated at a local scale
TL;DR: Questions are raised about the ability of equalization of family sizes to reduce genetic deterioration that adversely affects reintroduction success for captive populations of endangered species.
Abstract: Genetic adaptation to captive environments is likely to reduce the reproductive fitness of endangered species when they are reintroduced into natural environments. Equalization of family sizes is predicted to halve genetic adaptation to captivity as it removes selection among families and is recommended in captive management of threatened species. This prediction was evaluated by comparing the reproductive fitnesses of replicate populations of Drosophila maintained using either equal (EFS) or variable family sizes (VFS) for 25 generations in captivity under uncrowded conditions on a medium containing CuSO4. After 25 generations, EFS populations produced 8.8% more offspring per pair than their outbred base population on CuSO4 medium, while VFS produced 17.5% more. Consequently, the rate of genetic adaptation to captivity in EFS was about half that in VFS, as predicted. In simulated ‘wild’ conditions (crowded, competitive conditions on medium lacking CuSO4), both treatments showed much lower reproductive fitness than their outbred base population, the reductions being 38% in EFS populations and 43% in VFS populations. Surprisingly, reproductive fitness of the two treatments did not differ significantly under these conditions. These results raise doubts about the ability of equalization of family sizes to reduce genetic deterioration that adversely affects reintroduction success for captive populations of endangered species.
TL;DR: The results do not support the use of FA as a monitoring tool to detect inbreeding or loss of genetic diversity, and the relationship between FA and genetic diversity does exist, it is weak and inconsistent.
Abstract: Fluctuating asymmetry (FA), a measure of developmental stability, has been proposed as a simple technique for identifying populations suffering from inbreeding and a loss of genetic diversity. However, there is controversy regarding the relationship between FA and both allozyme heterozygosity and pedigree inbreeding coefficients (F). FA of sternopleural bristle number in Drosophila melanogaster was measured in populations maintained at effective sizes of 25 (8 replicates), 50 (6), 100 (4), 250 (3) and 500 (2) for 50 generations (inbreeding coefficients of 0.05—0.71). FA was calculated from the same data set using three different indices (FA1, FA5 and FA6). There was no significant relationship of FA with pedigree inbreeding coefficients for any of the three indices. The relationship between FA and allozyme heterozygosity was non-significant for indices FA5 and FA6 (the more powerful indices) and only significant for FA1. A second comparison of highly inbred (F ≈ 1) populations with their outbred base population showed significantly greater FA in the inbred populations only when analysed with FA6. Analysis of the same data using FA1 and FA5 showed non-significant relationships in the opposite direction. If a relationship between FA and genetic diversity does exist, it is weak and inconsistent. Consequently, our results do not support the use of FA as a monitoring tool to detect inbreeding or loss of genetic diversity.
TL;DR: Large, esteemed species, such as green turtle and alligator snapper, have been replaced by smaller, more-abundant or mislabelled species, a phenomenon referred to as the mock turtle syndrome, which indicates that the trade in turtle products is not entirely legitimate.
Abstract: Much of the demand for turtle meat in North America and Europe during the past four centuries has been met using green turtle (Chelonia mydas) and other marine turtles. As stocks of marine turtles dwindled, harvest of the alligator snapping turtle (Macroclemys temminckii), the largest freshwater turtle in North America, increased in the south-eastern USA. As a result, this species has declined and is now protected in every state of the USA except Louisiana. There is concern that the remaining legal trade in turtle products may serve as a cover for illegally harvested species. To assess the composition of species in commerce, we purchased 36 putative turtle meat products in Louisiana and Florida. Using cytochrome b and control region sequences of the mitochondrial genome, we identified 19 samples as common snapping turtle (Chelydra serpentina), three as Florida softshell (Apalone ferox), one provisionally as softshell turtle (Apalone sp.), one as alligator snapping turtle, and eight as American alligator (Alligator mississippiensis). It appears that M. temminckii is no longer the predominant species in markets of Louisiana. The presence of alligator meat in a quarter of the samples indicates that the trade in turtle products is not entirely legitimate. As is often the case for unsustainable wildlife harvests, large, esteemed species, such as green turtle and alligator snapper, have been replaced by smaller, more-abundant or mislabelled species, a phenomenon we refer to as the mock turtle syndrome.
TL;DR: It is recommended that for the moment European mink in eastern Europe and Spain should be managed separately, and the study highlights the dangers of using a single genetic marker in defining Evolutionarily Significant Units (ESUs).
Abstract: The European mink Mustela lutreola is one of Europe’s most endangered carnivores, with few vulnerable populations remaining. Surprisingly, a recent phylogeny placed a single mink specimen within the polecat (M. putorius, M. eversmannii) group, suggesting a recent speciation and/or the effects of hybridization. The analysis has now been extended to a further 51 mink and polecats. As before, phylogenetic methods failed to resolve the relationships between the species. One haplotype (C11) was found in both species, and predominated in European mink from Spain and eastern Europe. The known M. lutreola fossils are of very young date, so either mink arose recently, or else the situation is confused by hybridization and a biased fossil recovery. The study highlights the dangers of using a single genetic marker in defining Evolutionarily Significant Units (ESUs). Polecats and European mink are clearly distinct in their morphology and ecology, and should still be considered as separate ESUs, but without further data it is difficult to define Management Units. Following the precautionary principle, we recommend that for the moment European mink in eastern Europe (Belarus, Estonia and Russia) and Spain should be managed separately.
TL;DR: Genetic variability and population structure in the endangered peregrine falcon (Falco pere grinus) were studied using DNA microsatellite markers, and it is suggested that the difference in nesting habitat is not associated with genetic differentiation.
Abstract: Genetic variability and population structure in the endangered peregrine falcon (Falco peregrinus) were studied using DNA microsatellite markers. Special emphasis was placed on the subspecies F. p. peregrinus living in Scandinavia and Scotland. For comparative purposes, three North American peregrine subspecies (F. p. tundrius, F. p. pealei and F. p. anatum) and one Tasmanian subspecies (F. p. macropus) were included in this analysis. Twelve DNA microsatellite loci were analysed across a total of 146 individuals. The amount of genetic variation did not differ in peregrine populations for which adequate sample sizes were obtained. Within F. p. peregrinus, significant genetic differentiation was found between populations in northern and southern Scandinavia and between the Scandinavian and Scottish populations, while the populations in south-eastern Norway and south-western Sweden did not differ significantly. Analysis of cliff-nesting peregrines in northern Sweden and bog-nesting peregrines in northern Finland/Sweden suggests that the difference in nesting habitat is not associated with genetic differentiation. Population structuring in F. p. peregrinus is further supported by an assignment test, wherein simulated genotypes are correctly assigned to the northern and southern Scandinavian and Scottish populations with relatively high probabilities, and by analysis of allele-sharing among individuals. Cluster analysis of genetic distances grouped populations of peregrines in accordance with their subspecific designation, and peregrines on either side of the Atlantic Ocean were clearly separated.
TL;DR: It is hypothesized that the combined effects of fragmentation and predation in small remnants have led to the extinction of P. algirus in fragments smaller than c.
Abstract: This study reports the population responses of the lizard Psammodromus algirusto forest fragmentation by comparing its distribution in two contrasting situations of habitat conservation: a well connected mosaic landscape (forest patches larger than 2000 ha and/or connected by corridors that prevent their isolation), and an archipelago of forest remnants embedded within a matrix of cereal fields. The frequency of occurrence of P. algirus was larger in the unfragmented habitats (14 out of 19 censused plots) than in the fragments (two out of of 21 wood-lots). Vegetation structure was a good predictor of lizard occurrence under conditions of no fragmentation, but not in the fragments, where high plant cover seemed a necessary, but insufficient, condition for the survival of lizard populations, and where remnant size was the only variable that differed significantly between wood-lots with and without lizards. Historical fragmentation of the habitat is also crucial for understanding the current distribution of lizards, as shown by their absence from a large forest that was highly fragmented in the past but which has been regenerating for decades. It is hypothesized that the combined effects of fragmentation and predation in small remnants have led to the extinction of P. algirus in fragments smaller than c. 90 ha, recolonization being prevented by the very limited dispersal abilities of these forest lizards.
TL;DR: Micoureus demerarae can be used as a model species, thus improving knowledge of how extinction-prone populations of neotropical arboreal marsupials in forest fragments might be, and which management actions could decrease such risks.
Abstract: A population viability analysis (PVA) was carried out for populations of the arboreal didelphid Micoureus demerarae in eight small (1.5–15.0 ha) forest fragments in south-eastern Brazil. Analysis was based on field data obtained through demographic studies carried out since 1995. Populations are small, but connected by dispersing individuals, thus forming a metapopulation. Frequency of catastrophic fires was estimated from the Reserve's historical records. We used the computer package VORTEX for all analyses. All populations and the metapopulation were found to be endangered within 100 years (extinction probability > 0.98). A sensitivity analysis was run varying six parameters: three demographic (sex ratio, migration and mortality rates), two environmental (K, fire frequency) and one genetic (level of inbreeding depression). Genetics, K, mortality rates and sex ratio seemed to play major roles to population persistence, whereas catastrophes and migration rates had a secondary role. Among demographic factors, extinction rate was least sensitive to migration rate. Micoureus demerarae can be used as a model species, thus improving our knowledge of how extinction-prone populations of neotropical arboreal marsupials in forest fragments might be, and which management actions could decrease such risks.
TL;DR: A case study illustrating a four-phase approach to finding and assessing potential sites for the reintroduction of European beavers, Castor fiber, to Scotland, combining the use of Geographic Information Systems, fieldwork and population modelling.
Abstract: The general problem of evaluating the potential success of mammalian reintroduction plans has been tackled by a case study illustrating a four-phase approach to finding and assessing potential sites for the reintroduction of European beavers, Castor fiber, to Scotland, combining the use of Geographic Information Systems (GIS), fieldwork and population modelling. Phase 1 used GIS to investigate the wider availability of habitat for beavers in Scotland, and predicted that there is the capacity to support in the order of 180 to 390 beaver families. Phase 2 involved the preliminary assessment of nine sites using brief field surveys. Phase 3 focused further on the three most suitable sites, where a thorough habitat survey was used as a basis for calculating carrying capacities of between three and five families. Finally, phase 4 used population modelling to assess the viability and likely spread of beavers following release at these three best sites. High, medium and low parameters were derived from the literature, and populations were predicted to persist and spread as long as at least the medium parameters were used. This exercise illustrates the power of combining field surveys and GIS-based population modelling as a tool for planning reintroductions in general, and as a foundation for planning the reintroduction of beavers in particular.