Showing papers in "Applied Spectroscopy in 2011"

Surface-Enhanced Raman Scattering (SERS) and Surface-Enhanced Resonance Raman Scattering (SERRS): A Review of Applications:

Abstract: Surface-enhanced Raman scattering (SERS) and surface-enhanced resonance Raman scattering (SERRS) can provide positive identification of an analyte or an analyte mixture with high sensitivity and selectivity. Better understanding of the theory and advances in the understanding of the practice have led to the development of practical applications in which the unique advantages of SERS/SERRS have been used to provide effective solutions to difficult analytical problems. This review presents a basic theory and illustrates the way in which SERS/SERRS has been developed for practical use.

Review of super-resolution fluorescence microscopy for biology.

Abstract: Several methodologies have been developed over the past several years for super-resolution fluorescence microscopy including saturated structured-illumination microscopy (SSIM), stimulated emission depletion microscopy (STED), photoactivated localization microscopy (PALM), fluorescence photoactivation localization microscopy (FPALM), and stochastic optical reconstruction microscopy (STORM). While they have shown great promise for biological research, these techniques all have individual strengths and weaknesses. This review will describe the basic principles for achieving super resolution, demonstrate some applications in biology, and provide an overview of technical considerations for implementing these methods.

Determination of absolute configuration of chiral molecules using vibrational optical activity: a review.

Abstract: Determination of the absolute handedness, known as absolute configuration (AC), of chiral molecules is an important step in any field related to chirality, especially in the pharmaceutical industry. Vibrational optical activity (VOA) has become a powerful tool for the determination of the AC of chiral molecules in the solution state after nearly forty years of evolution. VOA offers a novel alternative, or supplement, to X-ray crystallography, permitting AC determinations on neat liquid, oil, and solution samples without the need to grow single crystals of the pure chiral sample molecules as required for X-ray analysis. By comparing the sign and intensity of the measured VOA spectrum with the corresponding ab initio density functional theory (DFT) calculated VOA spectrum of a chosen configuration, one can unambiguously assign the AC of a chiral molecule. Comparing measured VOA spectra with calculated VOA spectra of all the conformers can also provide solution-state conformational populations. VOA consists of infrared vibrational circular dichroism (VCD) and vibrational Raman optical activity (ROA). Currently, VCD is used routinely by researchers in a variety of backgrounds, including molecular chirality, asymmetric synthesis, chiral catalysis, drug screening, pharmacology, and natural products. Although the application of ROA in AC determination lags behind that of VCD, with the recent implementation of ROA subroutines in commercial quantum chemistry software, ROA will in the future complement VCD for AC determination. In this review, the basic principles of the application of VCD to the determination of absolute configuration in chiral molecules are described. The steps required for VCD spectral measurement and calculation are outlined, followed by brief descriptions of recently published papers reporting the determination of AC in small organic, pharmaceutical, and natural product molecules.

Review of the state-of-the-art of laser ablation inductively coupled plasma mass spectrometry.

Abstract: This paper is a review of the basic principles and recent developments of laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS) as a method for the element- and isotope-selective trace analysis of solid materials. In the course of this review, the aerosol formation/transportation process, quantification issues, as well as technical aspects concerning the system configuration and ICP operating conditions are outlined. Furthermore, the performance of femtosecond (fs) LA-based analyses as one of the most important advancements made over the past years is discussed. The benefits offered by fs-LA in comparison to LA using nanosecond (ns) laser sources are demonstrated on the basis of oxide layer and silicate glass analyses with different applied calibration strategies.

Vibrational Spectroscopy with Neutrons: A Review of New Directions:

Abstract: Inelastic neutron scattering spectroscopy (INS) has enabled vibrational spectra to be measured for over 50 years. Most studies have used a type of spectrometer that is straightforward to build and use and that provides spectra that are not dissimilar to infrared and Raman spectra. In this Focal Point Review Article we show the advantages of a type of neutron vibrational spectrometer that has been largely unknown to the spectroscopy community. These instruments are able to access regions of low momentum transfer at relatively large energy transfer. This means that the C-H, N-H, and O-H stretch regions can be exploited by INS spectroscopy for the first time. The instruments generally have very large detector area, which means that they are significantly more sensitive than the more commonly used instruments. They also allow the energy transfer as a function of momentum transfer to be examined. After briefly outlining the basics of INS spectroscopy, we describe the operational principles of the instruments and show how flux and resolution can be traded. We then review how the advantages of the instruments can be used to gain understanding of molecular systems in areas as diverse as hydrogen storage, hydrogen bonding, and fullerenes. The instruments are starting to have a significant impact in studies of catalysts and this is illustrated with recent studies of hydrogen on fuel cell catalysts, methyl chloride synthesis, the deactivation of methane reforming catalysts, and a model carbon monoxide oxidation catalyst.

Detection of drugs of abuse in saliva by surface-enhanced Raman spectroscopy (SERS).

Abstract: Eighty drugs of abuse and metabolites were successfully measured by surface-enhanced Raman spectroscopy (SERS) using gold- and silver-doped sol-gels immobilized in glass capillaries. A method was developed that provided consistent detection of 50 ppb cocaine in saliva in a focused study. This general method was successfully applied to the detection of a number of additional drugs in saliva, such as amphetamine, diazepam, and methadone.

Multidimensional Raman Spectroscopic Signatures as a Tool for Forensic Identification of Body Fluid Traces: A Review

Abstract: The analysis of body fluid traces during forensic investigations is a critical step in determining the key details of a crime. Several confirmatory and presumptive biochemical tests are currently utilized. However, these tests are all destructive, and no single method can be used to analyze all body fluids. This review outlines recent progress in the development of a novel universal approach for the nondestructive, confirmatory identification of body fluid traces using Raman spectroscopy. The method is based on the use of multidimensional spectroscopic signatures of body fluids and accounts for the intrinsic heterogeneity of dry traces and donor variation. The results presented here demonstrate that Raman spectroscopy has potential for identifying traces of semen, blood, saliva, sweat, and vaginal fluid with high confidence.

Spatial Differentiation of Sub-Micrometer Domains in a Poly(hydroxyalkanoate) Copolymer Using Instrumentation that Combines Atomic Force Microscopy (AFM) and Infrared (IR) Spectroscopy

Abstract: Atomic force microscopy (AFM) and infrared (IR) spectroscopy have been combined in a single instrument (AFM-IR) capable of producing sub-micrometer spatial resolution IR spectra and absorption images. This new capability enables the spectroscopic characterization of microdomain-forming polymers at levels not previously possible. Films of poly(3-hydroxybutyrate-co-3-hydroxyhexanoate) were solution cast on ZnSe prisms, followed by melting and annealing to generate crystalline microdomains of different sizes. A tunable IR laser generating pulses of the order of 10 ns was used for excitation of the sample films. Short duration thermomechanical waves, due to infrared absorption and resulting thermal expansion, were studied by monitoring the resulting excitation of the contact resonance modes of the AFM cantilever. Dramatic differences in the room-temperature IR spectra are observed in the 1200–1300 cm−1 range as a function of position on a spatial scale of less than one micrometer. This spectral region is particularly sensitive to the polymer backbone conformation. Such dramatic spectral differences have also been observed previously in bulk IR measurements, but only by comparing room-temperature spectra with ones collected at higher temperatures. Less dramatic, but significant, AFM-IR spectral differences are observed in the carbonyl stretching region around 1720 cm−1 as a function of location on the sample. Two overlapping, but relatively sharp, carbonyl bands are observed near 1720 cm−1 in more crystalline regions of the polymer, while a broader carbonyl stretching band appears centered at 1740 cm−1 in the more amorphous regions. Using this spectral region, it is possible to monitor the development of polymer crystalline structures at varying distances from a nucleation site, where the site was generated by bringing a heated AFM tip close to a specific location to locally anneal the sample.

Attenuated total reflection (ATR) Fourier transform infrared (FT-IR) spectroscopy of oxidized polymer-modified bitumens.

Abstract: Oxidative age hardening of bitumen results in increasing fatigue susceptibility of bituminous mixtures, thus reducing the service life of asphalt pavements. Polymer additives to bitumen have been shown to improve its viscoelastic properties and, in some cases, reduce the level of bitumen hardening. Fourier transform infrared (FT-IR) spectroscopy enables evaluation of oxidation levels in bitumen by measuring the concentration of oxygen-containing chemical functionalities. This paper summarizes the results of the investigation of oxidative age hardening of polymer-modified bitumens (PMB) caused by accelerated aging in laboratory conditions. The PMB samples are prepared with different concentrations of styrene-butadiene-based co-polymers. Next, the PMB samples are aged using standard procedures that employ air blowing at 163 °C for 85 min followed by conditioning the samples at 100 °C and 2.1 MPa pressure for 20 to 48 hours. The resultant changes in their chemical composition are evaluated by portable attenuated total reflection (ATR) spectrometer. Measurements of ketone, sulfoxide, and hydroxyl content in PMB samples indicated similar oxidation pathways to those of non-modified bitumens. In addition, no evidence of polymer degradation due to accelerated aging of PMB was found in this study.

Identification of polymer materials using laser-induced breakdown spectroscopy combined with artificial neural networks.

Abstract: A combination of laser-induced breakdown spectroscopy (LIBS) and artificial neural networks (ANNs) has been used for the identification of polymer materials, including polypropylene (PP), polyvinyl chloride (PVC), polytetrafluoroethylene (PTFE), polyoxymethylene (POM), polyethylene (PE), polyamide or nylon (PA), polycarbonate (PC) and poly(methyl methacrylate) (PMMA). After optimization of the experimental setup and the spectrum acquisition protocol, successful identification rates between 81 and 100% were achieved using spectral features gathered from single spectra without averaging (1 second acquisition time) over a wide spectral range (240-820 nm). Furthermore, ten different materials based on PVC were tested using the identification procedure. Correct identifications were obtained as well. Sorting of the materials into sub-categories of PVC materials according to their charges (concentration in trace elements such as Ca) was performed. The demonstrated capacities fit, in practice, the needs of plastic-waste sorting and of producing high-grade recycled plastic materials.

Fluorescence Correlation Spectroscopy: A Review of Biochemical and Microfluidic Applications

Abstract: Over the years fluorescence correlation spectroscopy (FCS) has proven to be a useful technique that has been utilized in several fields of study. Although FCS initially suffered from poor signal-to-noise ratios, the incorporation of confocal microscopy has overcome this drawback and transformed FCS into a sensitive technique with high figures of merit. In addition, tandem methods have evolved to include dual-color cross-correlation, total internal reflection fluorescence correlation, and fluorescence lifetime correlation spectroscopy combined with time-correlated single-photon counting. In this review, we discuss several applications of FSC for biochemical, microfluidic, and cellular investigations.

Raman spectroscopy using a spatial heterodyne spectrometer: proof of concept.

Abstract: The use of a spatial heterodyne interferometer-based spectrometer (SHS) for Raman spectroscopy is described. The motivation for this work is to develop a small, rugged, high-resolution ultraviolet (UV) Raman spectrometer that is compatible with pulsed laser sources and that is suitable for planetary space missions. UV Raman is a particular technical challenge for space applications because dispersive (grating) approaches require large spectrographs and very narrow slits to achieve the spectral resolution required to maximize the potential of Raman spectroscopy. The heterodyne approach of the SHS has only a weak coupling of resolution and throughput, so a high-resolution UV SHS can both be small and employ a wide slit to maximize throughput. The SHS measures all optical path differences in its interferogram simultaneously with a detector array, so the technique is compatible with gated detection using pulsed lasers, important to reject ambient background and mitigate fluorescence (already low in the UV) that might be encountered on a planetary surface where samples are uncontrolled. The SHS has no moving parts, and as the spectrum is heterodyned around the laser wavelength, it is particularly suitable for Raman measurements. In this preliminary report we demonstrate the ability to measure visible wavelength Raman spectra of liquid and solid materials using an SHS Raman spectrometer and a visible laser. Spectral resolution and bandpass are also discussed. Separation of anti-Stokes and Stokes Raman bands is demonstrated using two different approaches. Finally spectral bandpass doubling is demonstrated by forming an interference pattern in both directions on the ICCD detector followed by analysis using a two-dimensional Fourier transform.

Near-Infrared Luminescence of Cadmium Pigments: In Situ Identification and Mapping in Paintings

Abstract: A comprehensive study of the luminescence properties of cadmium pigments was undertaken to determine whether these properties could be used for in situ identification and mapping of the pigments in paintings. Cadmium pigments are semiconductors that show band edge luminescence in the visible range and deep trap luminescence in the red/infrared range. Emission maxima, quantum yields, and excitation spectra from the band edge and deep trap emissions were studied for sixty commercial cadmium pigments that span the color range from yellow to red (reflectance transition 470 to 660 nm). For paints containing cadmium pigments, luminescence from deep traps was more readily observable than that from the band edge, although the yield varied widely from zero to around 4.5%. Optimal excitation for emission is found to be in the visible for both pigments in powder form and mixed with a medium. The maxima of the deep trap emission shift with the band gap energy, providing a potentially useful way to assign pigment type even when used in pigment mixtures. The usefulness of the results of the study on mockups was demonstrated by the mapping of cadmium pigments of different hues with the aid of calibrated luminescence imaging spectroscopy in a painting by Edward Steichen, entitled Study for 'Le Tournesol' (1920). Analysis of the luminescence image cube reveals at least six unique spectral components, associated with emission from white pigments, paint binder, and cadmium red and yellow pigments. The results were compared with those from X-ray fluorescence spectrometry (XRF) and fiber-optic reflection spectroscopy (FORS) and the results obtained on paint samples containing cadmium pigments. These results show that, when present, the emission from traps can be used as an analytical tool to identify cadmium pigments, to distinguish among cadmium sulfide, cadmium zinc sulfide, and cadmium sulfoselenide, and to map cadmium pigments, even in mixtures.

On the difference between surface-enhanced raman scattering (SERS) spectra of cell growth media and whole bacterial cells.

Abstract: It has been recently suggested [N. E. Marotta and L. A. Bottomley, Appl. Spectrosc. 64, 601-606 (2010)] that previously reported surface-enhanced Raman scattering (SERS) spectra of vegetative bacterial cells are due to residual cell growth media that were not properly removed from samples of the lab-cultured microorganism suspensions. SERS spectra of several commonly used cell growth media are similar to those of bacterial cells, as shown here and reported elsewhere. However, a multivariate data analysis approach shows that SERS spectra of different bacterial species grown in the same growth media exhibit different characteristic vibrational spectra, SERS spectra of the same organism grown in different media display the same SERS spectrum, and SERS spectra of growth media do not cluster near the SERS spectra of washed bacteria. Furthermore, a bacterial SERS spectrum grown in a minimal medium, which uses inorganics for a nitrogen source and displays virtually no SERS features, exhibits a characteristic bacterial SERS spectrum. We use multivariate analysis to show how successive water washing and centrifugation cycles remove cell growth media and result in a robust bacterial SERS spectrum in contrast to the previous study attributing bacterial SERS signals to growth media.

On Sample Preparation for Surface-Enhanced Raman Scattering (SERS) of Bacteria and the Source of Spectral Features of the Spectra:

Abstract: The characterization, detection, and identification of bacteria using surface-enhanced Raman scattering (SERS) spectroscopy is drawing considerable attention due to its ability to provide rich intrinsic molecular information about molecules and molecular structures in close proximity to noble metal surfaces. However, sample preparation methods and experimental conditions must be carefully evaluated in order to obtain healthy, interpretable, and comparable results. In this study, several bacterial species including E. coli, B. megaterium, S. aureus, and S. cohnii were systematically evaluated to demonstrate the source of the spectral features of bacterial SERS spectra. It was found that the features observed in bacterial SERS spectra originate mostly from the bacteria surface with some contributions from metabolic activity or molecular species detached from the bacteria surface during sample preparation.

Extracting coal ash content from laser-induced breakdown spectroscopy (LIBS) spectra by multivariate analysis.

Abstract: Laser-induced breakdown spectroscopy (LIBS) combined with partial least squares (PLS) analysis has been applied for the quantitative analysis of the ash content of coal in this paper. The multivariate analysis method was employed to extract coal ash content information from LIBS spectra rather than from the concentrations of the main ash-forming elements. In order to construct a rigorous partial least squares regression model and reduce the calculation time, different spectral range data were used to construct partial least squares regression models, and then the performances of these models were compared in terms of the correlation coefficients of calibration and validation and the root mean square errors of calibration and cross-validation. Afterwards, the prediction accuracy, reproducibility, and the limit of detection of the partial least squares regression model were validated with independent laser-induced breakdown spectroscopy measurements of four unknown samples. The results show that a good agreement is observed between the ash content provided by thermo-gravimetric analyzer and the LIBS measurements coupled to the PLS regression model for the unknown samples. The feasibility of extracting coal ash content from LIBS spectra is approved. It is also confirmed that this technique has good potential for quantitative analysis of the ash content of coal.

Sodium and Potassium Released from Burning Particles of Brown Coal and Pine Wood in a Laminar Premixed Methane Flame Using Quantitative Laser-Induced Breakdown Spectroscopy:

Abstract: A quantitative point measurement of total sodium ([Na](total)) and potassium ([K](total)) in the plume of a burning particle of Australian Loy Yang brown coal (23 ± 3 mg) and of pine wood pellets (63 ± 3 mg) was performed using laser-induced breakdown spectroscopy (LIBS) in a laminar premixed methane flame at equivalence ratios ( U ) of 1.149 and 1.336. Calibration was performed using atomic sodium or potassium generated by evaporation of droplets of sodium sulfite (Na(2)SO(3)) or potassium sulfate (K(2)SO(4)) solutions seeded into the flame. The calibration compensated for the absorption by atomic alkalis in the seeded flame, which is significant at high concentrations of solution. This allowed quantitative measurements of sodium (Na) and potassium (K) released into the flame during the three phases of combustion, namely devolatilization, char, and ash cooking. The [Na](total) in the plume released from the combustion of pine wood pellets during the devolatilization was found to reach up to 13 ppm. The maximum concentration of total sodium ([Na](max)M(total)) and potassium ([K](max)(total)) released during the char phase of burning coal particles for φ = 1.149 was found to be 9.27 and 5.90 ppm, respectively. The [Na](max)(total) and [K](max)(total) released during the char phase of burning wood particles for φ = 1.149 was found to be 15.1 and 45.3 ppm, respectively. For the case of φ = 1.336, the [Na](max)(total) and [K](max)(total) were found to be 13.9 and 6.67 ppm during the char phase from burning coal particles, respectively, and 21.1 and 39.7 ppm, respectively, from burning wood particles. The concentration of alkali species was higher during the ash phase. The limit of detection (LOD) of sodium and potassium with LIBS in the present arrangement was estimated to be 29 and 72 ppb, respectively.

Semi-Automated Detection of Trace Explosives in Fingerprints on Strongly Interfering Surfaces with Raman Chemical Imaging:

Abstract: We have previously demonstrated the use of wide-field Raman chemical imaging (RCI) to detect and identify the presence of trace explosives in contaminated fingerprints. In this current work we demonstrate the detection of trace explosives in contaminated fingerprints on strongly Raman scattering surfaces such as plastics and painted metals using an automated background subtraction routine. We demonstrate the use of partial least squares subtraction to minimize the interfering surface spectral signatures, allowing the detection and identification of explosive materials in the corrected Raman images. The resulting analyses are then visually superimposed on the corresponding bright field images to physically locate traces of explosives. Additionally, we attempt to address the question of whether a complete RCI of a fingerprint is required for trace explosive detection or whether a simple non-imaging Raman spectrum is sufficient. This investigation further demonstrates the ability to nondestructively identify explosives on fingerprints present on commonly found surfaces such that the fingerprint remains intact for further biometric analysis.

Time-Resolved Resonance Raman Spectroscopy: Exploring Reactive Intermediates

Abstract: The study of reaction mechanisms involves systematic investigations of the correlation between structure, reactivity, and time. The challenge is to be able to observe the chemical changes undergone by reactants as they change into products via one or several intermediates such as electronic excited states (singlet and triplet), radicals, radical ions, carbocations, carbanions, carbenes, nitrenes, nitrinium ions, etc. The vast array of intermediates and timescales means there is no single "do-it-all" technique. The simultaneous advances in contemporary time-resolved Raman spectroscopic techniques and computational methods have done much towards visualizing molecular fingerprint snapshots of the reactive intermediates in the microsecond to femtosecond time domain. Raman spectroscopy and its sensitive counterpart resonance Raman spectroscopy have been well proven as means for determining molecular structure, chemical bonding, reactivity, and dynamics of short-lived intermediates in solution phase and are advantageous in comparison to commonly used time-resolved absorption and emission spectroscopy. Today time-resolved Raman spectroscopy is a mature technique; its development owes much to the advent of pulsed tunable lasers, highly efficient spectrometers, and high speed, highly sensitive multichannel detectors able to collect a complete spectrum. This review article will provide a brief chronological development of the experimental setup and demonstrate how experimentalists have conquered numerous challenges to obtain background-free (removing fluorescence), intense, and highly spectrally resolved Raman spectra in the nanosecond to microsecond (ns-μs) and picosecond (ps) time domains and, perhaps surprisingly, laid the foundations for new techniques such as spatially offset Raman spectroscopy.

Comparison between Infrared and Raman Spectroscopic Analysis of Maturing Rabbit Cortical Bone

Abstract: The molecular composition of the organic and inorganic matrices of bone undergoes alterations during maturation. The aim of this study was to compare Fourier transform infrared (FT-IR) and near-infrared (NIR) Raman microspectroscopy techniques for characterization of the composition of growing and developing bone from young to skeletally mature rabbits. Moreover, the specificity and differences of the techniques for determining bone composition were clarified. The humeri of female New Zealand White rabbits, with age range from young to skeletally mature animals (four age groups, n = 7 per group), were studied. Spectral peak areas, intensities, and ratios related to organic and inorganic matrices of bone were analyzed and compared between the age groups and between FT-IR and Raman microspectroscopic techniques. Specifically, the degree of mineralization, type-B carbonate substitution, crystallinity of hydroxyapatite (HA), mineral content, and collagen maturity were examined. Significant changes during maturation were observed in various compositional parameters with one or both techniques. Overall, the compositional parameters calculated from the Raman spectra correlated with analogous parameters calculated from the IR spectra. Collagen cross-linking (XLR), as determined through peak fitting and directly from the IR spectra, were highly correlated. The mineral/matrix ratio in the Raman spectra was evaluated with multiple different peaks representing the organic matrix. The results showed high correlation with each other. After comparison with the bone mineral density (BMD) values from micro-computed tomography (micro-CT) imaging measurements and crystal size from XRD measurements, it is suggested that Raman microspectroscopy is more sensitive than FT-IR microspectroscopy for the inorganic matrix of the bone. In the literature, similar spectroscopic parameters obtained with FT-IR and NIR Raman microspectroscopic techniques are often compared. According to the present results, however, caution is required when performing this kind of comparison.

Portable, Fiber-Based, Diffuse Reflection Spectroscopy (DRS) Systems for Estimating Tissue Optical Properties

Abstract: Steady-state diffuse reflection spectroscopy is a well-studied optical technique that can provide a noninvasive and quantitative method for characterizing the absorption and scattering properties of biological tissues. Here, we compare three fiber-based diffuse reflection spectroscopy systems that were assembled to create a light-weight, portable, and robust optical spectrometer that could be easily translated for repeated and reliable use in mobile settings. The three systems were built using a broadband light source and a compact, commercially available spectrograph. We tested two different light sources and two spectrographs (manufactured by two different vendors). The assembled systems were characterized by their signal-to-noise ratios, the source-intensity drifts, and detector linearity. We quantified the performance of these instruments in extracting optical properties from diffuse reflectance spectra in tissue-mimicking liquid phantoms with well-controlled optical absorption and scattering coefficients. We show that all assembled systems were able to extract the optical absorption and scattering properties with errors less than 10%, while providing greater than ten-fold decrease in footprint and cost (relative to a previously well-characterized and widely used commercial system). Finally, we demonstrate the use of these small systems to measure optical biomarkers in vivo in a small-animal model cancer therapy study. We show that optical measurements from the simple portable system provide estimates of tumor oxygen saturation similar to those detected using the commercial system in murine tumor models of head and neck cancer.

Minor Distortions with Major Consequences: Correcting Distortions in Imaging Spectrographs

Abstract: Projective transformation is a mathematical correction (implemented in software) used in the remote imaging field to produce distortion-free images. We present the application of projective transformation to correct minor alignment and astigmatism distortions that are inherent in dispersive spectrographs. Patterned white-light images and neon emission spectra were used to produce registration points for the transformation. Raman transects collected on microscopy and fiber-optic systems were corrected using established methods and compared with the same transects corrected using the projective transformation. Even minor distortions have a significant effect on reproducibility and apparent fluorescence background complexity. Simulated Raman spectra were used to optimize the projective transformation algorithm. We demonstrate that the projective transformation reduced the apparent fluorescent background complexity and improved reproducibility of measured parameters of Raman spectra. Distortion correction using a projective transformation provides a major advantage in reducing the background fluorescence complexity even in instrumentation where slit-image distortions and camera rotation were minimized using manual or mechanical means. We expect these advantages should be readily applicable to other spectroscopic modalities using dispersive imaging spectrographs.

Synthesis and Characterization of Gold Nanoparticles Coated with Ultrathin and Chemically Inert Dielectric Shells for SHINERS Applications

Abstract: We very recently reported a new spectroscopic application for expanding the versatility of surface Raman called "shell-isolated nanoparticle-enhanced Raman spectroscopy" or "SHINERS". The most important and most difficult part of the SHINERS experiment is the effective transfer of the strong electromagnetic field from a gold core through the isolating silica or alumina shell to the probed surface. For this it is essential that the chemically inert dielectric shell be ultrathin (2-5 nm) yet pinhole-free. Herein we describe experimental and theoretical aspects of our SHINERS method in more detail. We provide a protocol for the synthesis and characterization of optimized shell-isolated nanoparticles (SHINs), and we examine the advantages of SHINERS nanoparticles over bare gold nanoparticles. We also present high-quality Raman spectra obtained from gold and platinum single-crystal surfaces in an electrochemical environment by our SHINERS technique. SHINERS is a simple and cost-effective approach that expands the flexibility of surface-enhanced Raman scattering (SERS) for an unprecedented diversity of applications in materials and surface sciences.

A model-free, fully automated baseline-removal method for Raman spectra.

Abstract: We present here a fully automated spectral baseline-removal procedure. The method uses a large-window moving average to estimate the baseline; thus, it is a model-free approach with a peak-stripping method to remove spectral peaks. After processing, the baseline-corrected spectrum should yield a flat baseline and this endpoint can be verified with the χ(2)-statistic. The approach provides for multiple passes or iterations, based on a given χ(2)-statistic for convergence. If the baseline is acceptably flat given the χ(2)-statistic after the first pass at correction, the problem is solved. If not, the non-flat baseline (i.e., after the first effort or first pass at correction) should provide an indication of where the first pass caused too much or too little baseline to be subtracted. The second pass thus permits one to compensate for the errors incurred on the first pass. Thus, one can use a very large window so as to avoid affecting spectral peaks--even if the window is so large that the baseline is inaccurately removed--because baseline-correction errors can be assessed and compensated for on subsequent passes. We start with the largest possible window and gradually reduce it until acceptable baseline correction based on the χ(2) statistic is achieved. Results, obtained on both simulated and measured Raman data, are presented and discussed.

In Situ Semi-Quantitative Analysis of Polluted Soils by Laser-Induced Breakdown Spectroscopy (LIBS)

Abstract: Time-saving, low-cost analyses of soil contamination are required to ensure fast and efficient pollution removal and remedial operations. In this work, laser-induced breakdown spectroscopy (LIBS) has been successfully applied to in situ analyses of polluted soils, providing direct semi-quantitative information about the extent of pollution. A field campaign has been carried out in Brittany (France) on a site presenting high levels of heavy metal concentrations. Results on iron as a major component as well as on lead and copper as minor components are reported. Soil samples were dried and prepared as pressed pellets to minimize the effects of moisture and density on the results. LIBS analyses were performed with a Nd:YAG laser operating at 1064 nm, 60 mJ per 10 ns pulse, at a repetition rate of 10 Hz with a diameter of 500 μm on the sample surface. Good correlations were obtained between the LIBS signals and the values of concentrations deduced from inductively coupled plasma atomic emission spectroscopy (ICP-AES). This result proves that LIBS is an efficient method for optimizing sampling operations. Indeed, "LIBS maps" were established directly on-site, providing valuable assistance in optimizing the selection of the most relevant samples for future expensive and time-consuming laboratory analysis and avoiding useless analyses of very similar samples. Finally, it is emphasized that in situ LIBS is not described here as an alternative quantitative analytical method to the usual laboratory measurements but simply as an efficient time-saving tool to optimize sampling operations and to drastically reduce the number of soil samples to be analyzed, thus reducing costs. The detection limits of 200 ppm for lead and 80 ppm for copper reported here are compatible with the thresholds of toxicity; thus, this in situ LIBS campaign was fully validated for these two elements. Consequently, further experiments are planned to extend this study to other chemical elements and other matrices of soils.

Detection of trace melamine in raw materials used for protein pharmaceutical manufacturing using surface-enhanced Raman spectroscopy (SERS) with gold nanoparticles.

Abstract: Melamine, a nitrogen-rich molecule, was found as an adulterant in pet foods in 2007 in North America and in milk products in 2008 in China These scandalous abuses of melamine have alarmed the biopharmaceutical industry and the FDA and alerted them to potential adulteration and contamination of melamine in raw materials used to make protein therapeutics Highly sensitive analytical methods are needed to screen melamine adulteration and contamination in raw materials We conducted surface-enhanced Raman spectroscopy (SERS) experiments to test trace melamine spiked in three raw materials commonly used for protein pharmaceutical formulation and purification, including sucrose, urea, and arginine, with a portable Raman device and gold nanoparticles The detection limit of 10 ppb in raw material dissolved in 30:70% water/acetonitrile is equivalent to 05 ppm in solid raw material It has excellent linearity in the concentration range measured The cross-validation regression coefficient R2 and the standard error of prediction (SEP) are 0960 and 718 ppb, respectively, in sucrose The R2 and SEP are 0958 and 915 ppb in urea It has a relatively lower R2 = 0630 and a SEP of 350 ppb in arginine, which could be due to the competitive adsorption of arginine molecules to the surfaces of gold nanoparticles The detection of melamine using the SERS technique is rapid (within 3 minutes), convenient, and requires no extraction procedure, offering an alternative method for screening melamine in raw materials at biopharmaceutical manufacture sites

Nature of Hydrogen Bonding of Water Molecules in Aqueous Solutions of Glycerol by Attenuated Total Reflection (ATR) Infrared Spectroscopy

Abstract: Attenuated total reflection infrared (ATR-IR) spectroscopy was performed on glycerol/water solutions in order to gain a better understanding of the strong hydrogen bonding of glycerol as a humectant. The OH stretching band after eliminating the contribution of glycerol OH in the glycerol/water solutions was decomposed using three Gaussian components. With increasing glycerol concentrations up to 50 volume %, the decrease of the 3428 cm–1 component (middle H-bond component) and the increase of the 3562 cm–1 component (longer H-bond component) suggested the breaking of H bonds among water molecules. On the other hand, the 3242 cm–1 component (shorter H-bond component) remained unchanged. It was expected that water molecules surrounding glycerol molecules are retained by strong H bonding between H atoms of water and O atoms in C–O of glycerol when aqueous solutions containing glycerol are introduced in human skin.

Elastic Net Grouping Variable Selection Combined with Partial Least Squares Regression (EN-PLSR) for the Analysis of Strongly Multi-collinear Spectroscopic Data

Abstract: In this paper a novel wavelength region selection algorithm, called elastic net grouping variable selection combined with partial least squares regression (EN-PLSR), is proposed for multi-component spectral data analysis. The EN-PLSR algorithm can automatically select successive strongly correlated prediction variable groups related to the response variable using two steps. First, a portion of the correlated predictors are selected and divided into subgroups by means of the grouping effect of elastic net estimation. Then, a recursive leave-one-group-out strategy is employed to further shrink the variable groups in terms of the root mean square error of cross-validation (RMSECV) criterion. The performance of the algorithm with real near-infrared (NIR) spectroscopic data sets shows that the EN-PLSR algorithm is competitive with full-spectrum PLS and moving window partial least squares (MWPLS) regression methods and it is suitable for use with strongly correlated spectroscopic data.

Confocal Raman Microspectroscopic Study of the Molecular Status of Carotenoids in Tomato Fruits and Foods

Abstract: To understand the uptake into the body of bioactive "healthy" molecules from fruits and vegetables it is necessary to know where they are located within the original plant structures and what path they take as the plant is processed before consumption. This means not only the location but also the physical state of the molecule, e.g., crystalline or solvated, as this affects uptake. This study demonstrates how confocal Raman microspectroscopy can be used to follow changes in the physical state of carotenoids in tomatoes. We show how the three main carotenoids found in tomatoes, Iycopene, β-carotene, and lutein, are distinguished from each other and how their physical state can be determined. We then show how this information can be used in situ within tomato fruit organelles, in three different tomato varieties, to locate the different carotenoids and determine their physical status. The effect of processing on carotenoids in tomatoes is also shown. This type of information can be of great benefit in availability trials to help rationalize results and define the state in which foods should be presented to the body to maximize uptake.

Removal of Surface Contamination and Self-Assembled Monolayers (SAMs) from Silver (Ag) Nanorod Substrates by Plasma Cleaning with Argon:

Abstract: Surface contamination of surface-enhanced Raman (SERS)-active metallic substrates has been a limitation to the utility of SERS as an analytical technique, potentially affecting surface coverage, spectral reproducibility, and analytical limits of detection. We have developed a simple and versatile cleaning method for SERS-active Ag nanorod arrays that consists of a short (4 min) exposure of the substrate to an Ar(+) plasma in a low-pressure environment. The findings presented here demonstrate that this cleaning procedure essentially eliminates organic background contamination. This procedure works equally well for self-assembled monolayers of thiolates that strongly adsorb onto Au and Ag surfaces. For SERS-active surfaces composed of arrays of Ag nanorods prepared by oblique-angle vapor deposition, we investigated the (1) Raman band intensities, (2) nanorod morphology via scanning electron microscopy, and (3) surface hydrophobicity via static contact angle measurements, as a function of exposure time of the Ag nanorods to the Ar(+) plasma. Short (4 min) exposure to Ar(+) plasma eliminated background contamination but decreased the observed SERS intensity for re-adsorbed analytes by approximately a factor of 2 while leaving the nanorod morphology essentially unchanged. Prolonged exposure to Ar(+) plasma (>10 min) resulted in substantial morphological changes of the Ag nanorod lattice and led to a decrease in the observed SERS intensities by a factor of 10. The results presented here suggest that Ar(+) plasma cleaning is an efficient process for removing carbonaceous and organic contamination as well as thiolate monolayers from SERS-active Ag surfaces, as long as the plasma conditions and exposure times are carefully monitored.