•Journal•ISSN: 2352-3409
Data in Brief
About: Data in Brief is an academic journal. The journal publishes majorly in the area(s): Population & Genome. It has an ISSN identifier of 2352-3409. It is also open access. Over the lifetime, 7535 publication(s) have been published receiving 27189 citation(s).
Topics: Population, Genome, Proteome, Adsorption, Gene
Papers
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TL;DR: A simple econometric model that could be useful to predict the spread of COVID-2019 is proposed that was performed on the Johns Hopkins epidemiological data and performed Auto Regressive Integrated Moving Average model prediction.
Abstract: Coronavirus disease 2019 (COVID-2019) has been recognized as a global threat, and several studies are being conducted using various mathematical models to predict the probable evolution of this epidemic. These mathematical models based on various factors and analyses are subject to potential bias. Here, we propose a simple econometric model that could be useful to predict the spread of COVID-2019. We performed Auto Regressive Integrated Moving Average (ARIMA) model prediction on the Johns Hopkins epidemiological data to predict the epidemiological trend of the prevalence and incidence of COVID-2019. For further comparison or for future perspective, case definition and data collection have to be maintained in real time.
282 citations
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TL;DR: The Relative importance of multiple scale factors to oak tree mortality due to Japanese oak wilt disease and surrounding forest conditions and the findings using this dataset are published.
Abstract: Japanese oak wilt (Raffaelea quercivora) is a vector-borne disease transmitted by the flying ambrosia beetle, Platypus quercivorus, and causes mass mortality in the fagaceous species of Japan. The data described in this article are available in Mendeley Data, DOI: 10.17632/xwj98nb39r.1 [1] and include the mortality status of 1089 Quercus crispula and 846 Quercus serrata trees and surrounding forest conditions. The findings using this dataset were published in M. Oguro, S. Imahiro, S. Saito, T. Nakashizuka, Relative importance of multiple scale factors to oak tree mortality due to Japanese oak wilt disease, For. Ecol. Manag. (2015) doi:10.1016/j.foreco.2015.07.016 [2].
185 citations
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TL;DR: The method for presenting a simple and accurate colorimetric assay for catalase activities is described, based on the reaction of undecomposed hydrogen peroxide with ammonium molybdate, which has a maximum absorbance at 374 nm.
Abstract: Here we provide raw and processed data and methods for the estimation of catalase activities. The method for presenting a simple and accurate colorimetric assay for catalase activities is described. This method is based on the reaction of undecomposed hydrogen peroxide with ammonium molybdate to produce a yellowish color, which has a maximum absorbance at 374 nm. The method is characterized by adding a correction factor to exclude the interference that arises from the presence of amino acids and proteins in serum. The assay acts to keep out the interferences that arose from measurement of absorbance at unsuitable wavelengths.
112 citations
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TL;DR: Binding in the skull and meninges is found near lateral and medial orbitofrontal, lateral occipital, inferior and middle temporal, superior and inferior parietal, and inferior cerebellar gray matter and the choroid plexus shows non-specific binding that bleeds into hippocampus.
Abstract: [18F]-AV-1451 is a leading tracer used with positron emission tomography (PET) to quantify tau pathology. However, [18F]-AV-1451 shows "off target" or non-specific binding, which we define as binding of the tracer in unexpected areas unlikely to harbor aggregated tau based on autopsy literature [1]. Along with caudate, putamen, pallidum and thalamus non-specific binding [2], [3], we have found binding in the superior portion of the cerebellar gray matter, leading us to use inferior cerebellar gray as the reference region. We also addressed binding in the posterior portion of the choroid plexus. PET signal unlikely to be associated with tau also occurs in skull, meninges and soft tissue (see e.g. [4]). We refer to [18F]-AV-1451 binding in the skull and meninges as extra-cortical hotspots (ECH) and find them near lateral and medial orbitofrontal, lateral occipital, inferior and middle temporal, superior and inferior parietal, and inferior cerebellar gray matter. Lastly, the choroid plexus also shows non-specific binding that bleeds into hippocampus. We are providing the code (http://www.runmycode.org/companion/view/2798) used to create different regions of interest (ROIs) that we then used to perform Partial Volume Correction (PVC) using the Rousset geometric transfer matrix method (GTM, [5]). This method was used in the companion article, "Comparison of multiple tau-PET measures as biomarkers in aging and Alzheimer's Disease" ([6], DOI 10.1016/j.neuroimage.2017.05.058).
111 citations
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TL;DR: A novel chorological data compilation for the main European tree and shrub species is presented, intended to provide a synthetic continental-scale overview of the species ranges.
Abstract: A novel chorological data compilation for the main European tree and shrub species is presented. This dataset was produced by combining numerous and heterogeneous data collected from 20th century atlas monographs providing complete species distribution maps, and from more recent national to regional atlases, occurrence geodatabases and scientific literature. The dataset is composed of numerous species distribution maps available in geographical information system (GIS) format, created by compiling, evaluating and synthesizing data of all collected sources. The geometry of the individual datasets describes contiguous large areas of occupancy of each species as polygons and fragmented or isolated occurrences as points. Since this geodatabase is intended to provide a synthetic continental-scale overview of the species ranges, the maps represent the species' general chorology and the presence/absence information should not be considered absolute in terms of geolocation. Errors and imprecisions arising from the interpretation and digitalization processes are likely to occur, especially in those areas where detailed information is scarce. As new information sources become available, these will be used to address current data gaps, implement corrections and updates of the chorology dataset as well as expanding it to comprise additional species.
110 citations