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Showing papers in "Physical Review E in 2016"


Journal ArticleDOI
TL;DR: An exact equivalence is shown between maximization of the generalized modularity that includes a resolution parameter and the special case of the block model known as the planted partition model, in which all communities in a network are assumed to have statistically similar properties.
Abstract: We demonstrate an equivalence between two widely used methods of community detection in networks, the method of modularity maximization and the method of maximum likelihood applied to the degree-corrected stochastic block model. Specifically, we show an exact equivalence between maximization of the generalized modularity that includes a resolution parameter and the special case of the block model known as the planted partition model, in which all communities in a network are assumed to have statistically similar properties. Among other things, this equivalence provides a mathematically principled derivation of the modularity function, clarifies the conditions and assumptions of its use, and gives an explicit formula for the optimal value of the resolution parameter.

306 citations


Journal ArticleDOI
TL;DR: The authors' bounds provide a general class of constraints for nonequilibrium systems and show that the parabolic bound is also valid for three paradigmatic examples of driven diffusive systems for which the generating function can be calculated using the additivity principle.
Abstract: For current fluctuations in nonequilibrium steady states of Markovian processes, we derive four different universal bounds valid beyond the Gaussian regime. Different variants of these bounds apply to either the entropy change or any individual current, e.g., the rate of substrate consumption in a chemical reaction or the electron current in an electronic device. The bounds vary with respect to their degree of universality and tightness. A universal parabolic bound on the generating function of an arbitrary current depends solely on the average entropy production. A second, stronger bound requires knowledge both of the thermodynamic forces that drive the system and of the topology of the network of states. These two bounds are conjectures based on extensive numerics. An exponential bound that depends only on the average entropy production and the average number of transitions per time is rigorously proved. This bound has no obvious relation to the parabolic bound but it is typically tighter further away from equilibrium. An asymptotic bound that depends on the specific transition rates and becomes tight for large fluctuations is also derived. This bound allows for the prediction of the asymptotic growth of the generating function. Even though our results are restricted to networks with a finite number of states, we show that the parabolic bound is also valid for three paradigmatic examples of driven diffusive systems for which the generating function can be calculated using the additivity principle. Our bounds provide a general class of constraints for nonequilibrium systems.

243 citations


Journal ArticleDOI
TL;DR: The breather, rogue wave, and semirational solutions of the HGNLS equation can be converted into the nonpulsating soliton solutions and the novel interactions between the rogue waves and other nonlinear waves are displayed.
Abstract: We study the nonlinear waves on constant backgrounds of the higher-order generalized nonlinear Schrodinger (HGNLS) equation describing the propagation of ultrashort optical pulse in optical fibers. We derive the breather, rogue wave, and semirational solutions of the HGNLS equation. Our results show that these three types of solutions can be converted into the nonpulsating soliton solutions. In particular, we present the explicit conditions for the transitions between breathers and solitons with different structures. Further, we investigate the characteristics of the collisions between the soliton and breathers. Especially, based on the semirational solutions of the HGNLS equation, we display the novel interactions between the rogue waves and other nonlinear waves. In addition, we reveal the explicit relation between the transition and the distribution characteristics of the modulation instability growth rate.

193 citations


Journal ArticleDOI
TL;DR: This work analyzes a recently proposed work meter for the case of a Gaussian pointer state and compares it with the results obtained by two projective and, alternatively, two Gaussian measurements.
Abstract: Various approaches of defining and determining work performed on a quantum system are compared. Any operational definition of work, however, must allow for two facts: first, that work characterizes a process rather than an instantaneous state of a system and, second, that quantum systems are sensitive to the interactions with a measurement apparatus. We compare different measurement scenarios on the basis of the resulting postmeasurement states and the according probabilities for finding a particular work value. In particular, we analyze a recently proposed work meter for the case of a Gaussian pointer state and compare it with the results obtained by two projective and, alternatively, two Gaussian measurements. In the limit of a strong effective measurement strength the work distribution of projective two energy measurements can be recovered. In the opposite limit the average of work becomes independent of any measurement. Yet the fluctuations about this value diverge. The performance of the work meter is illustrated by the example of a spin in a suddenly changing magnetic field.

182 citations


Journal ArticleDOI
TL;DR: The structure of simplicial complexes is characterized using their generalized degrees that capture fundamental properties of one, two, three, or more linked nodes using the configuration model and the canonical ensemble, enforcing the sequence of generalized degrees of the nodes and the order of the expected generalized degrees.
Abstract: Simplicial complexes are generalized network structures able to encode interactions occurring between more than two nodes. Simplicial complexes describe a large variety of complex interacting systems ranging from brain networks to social and collaboration networks. Here we characterize the structure of simplicial complexes using their generalized degrees that capture fundamental properties of one, two, three, or more linked nodes. Moreover, we introduce the configuration model and the canonical ensemble of simplicial complexes, enforcing, respectively, the sequence of generalized degrees of the nodes and the sequence of the expected generalized degrees of the nodes. We evaluate the entropy of these ensembles, finding the asymptotic expression for the number of simplicial complexes in the configuration model. We provide the algorithms for the construction of simplicial complexes belonging to the configuration model and the canonical ensemble of simplicial complexes. We give an expression for the structural cutoff of simplicial complexes that for simplicial complexes of dimension $d=1$ reduces to the structural cutoff of simple networks. Finally, we provide a numerical analysis of the natural correlations emerging in the configuration model of simplicial complexes without structural cutoff.

177 citations


Journal ArticleDOI
TL;DR: The results suggest that the role of fluid connectivity cannot be ignored for multiphase flow and show that fluid topology can undergo substantial changes during flow at constant saturation, which is one of the underlying causes of hysteretic behavior.
Abstract: In multiphase flow in porous media the consistent pore to Darcy scale description of two-fluid flow processes has been a long-standing challenge Immiscible displacement processes occur at the scale of individual pores However, the larger scale behavior is described by phenomenological relationships such as relative permeability, which typically uses only fluid saturation as a state variable As a consequence pore scale properties such as contact angle cannot be directly related to Darcy scale flow parameters Advanced imaging and computational technologies are closing the gap between the pore and Darcy scale, supporting the development of new theory We utilize fast x-ray microtomography to observe pore-scale two-fluid configurations during immiscible flow and initialize lattice Boltzmann simulations that demonstrate that the mobilization of disconnected nonwetting phase clusters can account for a significant fraction of the total flux We show that fluid topology can undergo substantial changes during flow at constant saturation, which is one of the underlying causes of hysteretic behavior Traditional assumptions about fluid configurations are therefore an oversimplification Our results suggest that the role of fluid connectivity cannot be ignored for multiphase flow On the Darcy scale, fluid topology and phase connectivity are accounted for by interfacial area and Euler characteristic as parameters that are missing from our current models

172 citations


Journal ArticleDOI
TL;DR: By introducing a modified quantum Otto cycle, this work fully characterizes operational regimes forbidden in the standard case, such as refrigeration and work extraction at the same time, accompanied by efficiencies equal to unity.
Abstract: We analyze the entropy production and the maximal extractable work from a squeezed thermal reservoir. The nonequilibrium quantum nature of the reservoir induces an entropy transfer with a coherent contribution while modifying its thermal part, allowing work extraction from a single reservoir, as well as great improvements in power and efficiency for quantum heat engines. Introducing a modified quantum Otto cycle, our approach fully characterizes operational regimes forbidden in the standard case, such as refrigeration and work extraction at the same time, accompanied by efficiencies equal to unity.

170 citations


Journal ArticleDOI
TL;DR: This work locates all coherent vortices in the flow simultaneously, thereby showing high potential for automated vortex tracking and illustrates the performance of this technique by identifying coherent Lagrangian vortice in several two- and three-dimensional flows.
Abstract: One of the ubiquitous features of real-life turbulent flows is the existence and persistence of coherent vortices. Here we show that such coherent vortices can be extracted as clusters of Lagrangian trajectories. We carry out the clustering on a weighted graph, with the weights measuring pairwise distances of fluid trajectories in the extended phase space of positions and time. We then extract coherent vortices from the graph using tools from spectral graph theory. Our method locates all coherent vortices in the flow simultaneously, thereby showing high potential for automated vortex tracking. We illustrate the performance of this technique by identifying coherent Lagrangian vortices in several two- and three-dimensional flows.

167 citations


Journal ArticleDOI
TL;DR: This work shows that there exists an optimal α that minimizes the mean time to reach the target, thereby offering a step towards a viable strategy to locate targets in a crowded environment.
Abstract: What happens when a continuously evolving stochastic process is interrupted with large changes at random intervals τ distributed as a power law ∼τ^{-(1+α)};α>0? Modeling the stochastic process by diffusion and the large changes as abrupt resets to the initial condition, we obtain exact closed-form expressions for both static and dynamic quantities, while accounting for strong correlations implied by a power law. Our results show that the resulting dynamics exhibits a spectrum of rich long-time behavior, from an ever-spreading spatial distribution for α 1. The dynamics has strong consequences on the time to reach a distant target for the first time; we specifically show that there exists an optimal α that minimizes the mean time to reach the target, thereby offering a step towards a viable strategy to locate targets in a crowded environment.

160 citations


Journal ArticleDOI
TL;DR: A microfield approach for studying the dependence of the orientational polarization of the water in aqueous electrolyte solutions upon the salt concentration and temperature, which gives a remarkably accurate description of the dielectric constant for a variety of salts and a wide range of concentrations.
Abstract: We present a microfield approach for studying the dependence of the orientational polarization of the water in aqueous electrolyte solutions upon the salt concentration and temperature. The model takes into account the orientation of the solvent dipoles due to the electric field created by ions, and the effect of thermal fluctuations. The model predicts a dielectric functional dependence of the form ɛ(c)=ɛ_{w}-βL(3αc/β),β=ɛ_{w}-ɛ_{ms}, where L is the Langevin function, c is the salt concentration, ɛ_{w} is the dielectric of pure water, ɛ_{ms} is the dielectric of the electrolyte solution at the molten salt limit, and α is the total excess polarization of the ions. The functional form gives a remarkably accurate description of the dielectric constant for a variety of salts and a wide range of concentrations.

159 citations


Journal ArticleDOI
TL;DR: It is found that chimera and multichimera states occur even using local nearest neighbor interaction in a network of identical bursting neurons alone, in contrast with the existence of chimera states in populations of nonlocally or globally coupled oscillators.
Abstract: We study the existence of chimera states in pulse-coupled networks of bursting Hindmarsh-Rose neurons with nonlocal, global, and local (nearest neighbor) couplings. Through a linear stability analysis, we discuss the behavior of the stability function in the incoherent (i.e., disorder), coherent, chimera, and multichimera states. Surprisingly, we find that chimera and multichimera states occur even using local nearest neighbor interaction in a network of identical bursting neurons alone. This is in contrast with the existence of chimera states in populations of nonlocally or globally coupled oscillators. A chemical synaptic coupling function is used which plays a key role in the emergence of chimera states in bursting neurons. The existence of chimera, multichimera, coherent, and disordered states is confirmed by means of the recently introduced statistical measures and mean phase velocity.

Journal ArticleDOI
TL;DR: This work describes backtrack recovery as a continuous-time random walk, where the time for a polymerase to recover from a backtrack of a given depth is described as a first-passage time of a random walker to reach an absorbing state.
Abstract: Transcription is a key process in gene expression, in which RNA polymerases produce a complementary RNA copy from a DNA template. RNA polymerization is frequently interrupted by backtracking, a process in which polymerases perform a random walk along the DNA template. Recovery of polymerases from the transcriptionally inactive backtracked state is determined by a kinetic competition between one-dimensional diffusion and RNA cleavage. Here we describe backtrack recovery as a continuous-time random walk, where the time for a polymerase to recover from a backtrack of a given depth is described as a first-passage time of a random walker to reach an absorbing state. We represent RNA cleavage as a stochastic resetting process and derive exact expressions for the recovery time distributions and mean recovery times from a given initial backtrack depth for both continuous and discrete-lattice descriptions of the random walk. We show that recovery time statistics do not depend on the discreteness of the DNA lattice when the rate of one-dimensional diffusion is large compared to the rate of cleavage.

Journal ArticleDOI
TL;DR: An analysis of finite size effects reveals that quantum chaos and eigenstate thermalization occur in 2D-TFIM systems whenever the fields are nonvanishing and not too large.
Abstract: We study the onset of eigenstate thermalization in the two-dimensional transverse field Ising model (2D-TFIM) in the square lattice. We consider two nonequivalent Hamiltonians: the ferromagnetic 2D-TFIM and the antiferromagnetic 2D-TFIM in the presence of a uniform longitudinal field. We use full exact diagonalization to examine the behavior of quantum chaos indicators and of the diagonal matrix elements of operators of interest in the eigenstates of the Hamiltonian. An analysis of finite size effects reveals that quantum chaos and eigenstate thermalization occur in those systems whenever the fields are nonvanishing and not too large.

Journal ArticleDOI
TL;DR: The modulational stability regions with zero growth rate coincide with the transition condition using rogue wave eigenvalues, which could be useful for the experimental control and manipulation of the formation of generalized Peregrine rogue waves in diverse physical systems modeled by vc-NLS equation with higher-order effects.
Abstract: We study a variable-coefficient nonlinear Schrodinger (vc-NLS) equation with higher-order effects. We show that the breather solution can be converted into four types of nonlinear waves on constant backgrounds including the multipeak solitons, antidark soliton, periodic wave, and W-shaped soliton. In particular, the transition condition requiring the group velocity dispersion (GVD) and third-order dispersion (TOD) to scale linearly is obtained analytically. We display several kinds of elastic interactions between the transformed nonlinear waves. We discuss the dispersion management of the multipeak soliton, which indicates that the GVD coefficient controls the number of peaks of the wave while the TOD coefficient has compression effect. The gain or loss has influence on the amplitudes of the multipeak soliton. We further derive the breather multiple births and Peregrine combs by using multiple compression points of Akhmediev breathers and Peregrine rogue waves in optical fiber systems with periodic GVD modulation. In particular, we demonstrate that the Peregrine comb can be converted into a Peregrine wall by the proper choice of the amplitude of the periodic GVD modulation. The Peregrine wall can be seen as an intermediate state between rogue waves and W-shaped solitons. We finally find that the modulational stability regions with zero growth rate coincide with the transition condition using rogue wave eigenvalues. Our results could be useful for the experimental control and manipulation of the formation of generalized Peregrine rogue waves in diverse physical systems modeled by vc-NLS equation with higher-order effects.

Journal ArticleDOI
TL;DR: It is shown that there exist many-particle ground-state configurations in which directional hyperuniformity imparts exotic anisotropic physical properties to these states of matter, which could have technological relevance for manipulating light and sound waves in ways heretofore not thought possible.
Abstract: Disordered many-particle hyperuniform systems are exotic amorphous states of matter that lie between crystal and liquid: They are like perfect crystals in the way they suppress large-scale density fluctuations and yet are like liquids or glasses in that they are statistically isotropic with no Bragg peaks. These exotic states of matter play a vital role in a number of problems across the physical, mathematical as well as biological sciences and, because they are endowed with novel physical properties, have technological importance. Given the fundamental as well as practical importance of disordered hyperuniform systems elucidated thus far, it is natural to explore the generalizations of the hyperuniformity notion and its consequences. In this paper, we substantially broaden the hyperuniformity concept along four different directions. This includes generalizations to treat fluctuations in the interfacial area (one of the Minkowski functionals) in heterogeneous media and surface-area driven evolving microstructures, random scalar fields, divergence-free random vector fields, and statistically anisotropic many-particle systems and two-phase media. In all cases, the relevant mathematical underpinnings are formulated and illustrative calculations are provided. Interfacial-area fluctuations play a major role in characterizing the microstructure of two-phase systems (e.g., fluid-saturated porous media), physical properties that intimately depend on the geometry of the interface, and evolving two-phase microstructures that depend on interfacial energies (e.g., spinodal decomposition). In the instances of random vector fields and statistically anisotropic structures, we show that the standard definition of hyperuniformity must be generalized such that it accounts for the dependence of the relevant spectral functions on the direction in which the origin in Fourier space is approached (nonanalyticities at the origin). Using this analysis, we place some well-known energy spectra from the theory of isotropic turbulence in the context of this generalization of hyperuniformity. Among other results, we show that there exist many-particle ground-state configurations in which directional hyperuniformity imparts exotic anisotropic physical properties (e.g., elastic, optical, and acoustic characteristics) to these states of matter. Such tunability could have technological relevance for manipulating light and sound waves in ways heretofore not thought possible. We show that disordered many-particle systems that respond to external fields (e.g., magnetic and electric fields) are a natural class of materials to look for directional hyperuniformity. The generalizations of hyperuniformity introduced here provide theoreticians and experimentalists new avenues to understand a very broad range of phenomena across a variety of fields through the hyperuniformity ``lens.''

Journal ArticleDOI
TL;DR: This work applies the BPD algorithm (which has approximately linear time complexity) to the network optimal attack problem and demonstrates that it has much better performance than a recently proposed collective information algorithm.
Abstract: For a network formed by nodes and undirected links between pairs of nodes, the network optimal attack problem aims at deleting a minimum number of target nodes to break the network down into many small components. This problem is intrinsically related to the feedback vertex set problem that was successfully tackled by spin-glass theory and an associated belief propagation-guided decimation (BPD) algorithm [Zhou, Eur. Phys. J. B 86, 455 (2013)]. In the present work we apply the BPD algorithm (which has approximately linear time complexity) to the network optimal attack problem and demonstrate that it has much better performance than a recently proposed collective information algorithm [Morone and Makse, Nature 524, 65 (2015)] for different types of random networks and real-world network instances. The BPD-guided attack scheme often induces an abrupt collapse of the whole network, which may make it very difficult to defend.

Journal ArticleDOI
TL;DR: The two-layered network of Hindmarsh-Rose neurons is considered and it is revealed that in such a system multiplex interaction between layers is capable of exciting not only the synchronous interlayer chimera state but also nonidentical chimera patterns.
Abstract: We study excitation and suppression of chimera states in an ensemble of nonlocally coupled oscillators arranged in a framework of multiplex network. We consider the homogeneous network (all identical oscillators) with different parametric cases and interlayer heterogeneity by introducing parameter mismatch between the layers. We show the feasibility to suppress chimera states in the multiplex network via moderate interlayer interaction between a layer exhibiting chimera state and other layers which are in a coherent or incoherent state. On the contrary, for larger interlayer coupling, we observe the emergence of identical chimera states in both layers which we call an interlayer chimera state. We map the spatiotemporal behavior in a wide range of parameters, varying interlayer coupling strength and phase lag in two and three multiplexing layers. We also prove the emergence of interlayer chimera states in a multiplex network via evaluation of a continuous model. Furthermore, we consider the two-layered network of Hindmarsh-Rose neurons and reveal that in such a system multiplex interaction between layers is capable of exciting not only the synchronous interlayer chimera state but also nonidentical chimera patterns.

Journal ArticleDOI
TL;DR: In this paper, the authors revisited the classical problem of flow of electrolyte solutions through charged capillary nanopores or nanotubes as described by the capillary pore model (also called "space charge" theory), which assumes very long and thin pores and uses a onedimensional flux-force formalism which relates fluxes (electrical current, salt flux, and fluid velocity) and driving forces (difference in electric potential, salt concentration, and pressure).
Abstract: We revisit the classical problem of flow of electrolyte solutions through charged capillary nanopores or nanotubes as described by the capillary pore model (also called "space charge" theory). This theory assumes very long and thin pores and uses a one-dimensional flux-force formalism which relates fluxes (electrical current, salt flux, and fluid velocity) and driving forces (difference in electric potential, salt concentration, and pressure). We analyze the general case with overlapping electric double layers in the pore and a nonzero axial salt concentration gradient. The 3×3 matrix relating these quantities exhibits Onsager symmetry and we report a significant new simplification for the diagonal element relating axial salt flux to the gradient in chemical potential. We prove that Onsager symmetry is preserved under changes of variables, which we illustrate by transformation to a different flux-force matrix given by Gross and Osterle [J. Chem. Phys. 49, 228 (1968)JCPSA60021-960610.1063/1.1669814]. The capillary pore model is well suited to describe the nonlinear response of charged membranes or nanofluidic devices for electrokinetic energy conversion and water desalination, as long as the transverse ion profiles remain in local quasiequilibrium. As an example, we evaluate electrical power production from a salt concentration difference by reverse electrodialysis, using an efficiency versus power diagram. We show that since the capillary pore model allows for axial gradients in salt concentration, partial loops in current, salt flux, or fluid flow can develop in the pore. Predictions for macroscopic transport properties using a reduced model, where the potential and concentration are assumed to be invariant with radial coordinate ("uniform potential" or "fine capillary pore" model), are close to results of the full model.

Journal ArticleDOI
TL;DR: It is found that "even- order" equations in the set affect phase and "stretching factors" in the solutions, while "odd-order" equations affect the velocities, so odd-order equation solutions can be real functions, while even- order equation solutions are always complex.
Abstract: We study the infinite integrable nonlinear Schrodinger equation hierarchy beyond the Lakshmanan-Porsezian-Daniel equation which is a particular (fourth-order) case of the hierarchy. In particular, we present the generalized Lax pair and generalized soliton solutions, plane wave solutions, Akhmediev breathers, Kuznetsov-Ma breathers, periodic solutions, and rogue wave solutions for this infinite-order hierarchy. We find that "even- order" equations in the set affect phase and "stretching factors" in the solutions, while "odd-order" equations affect the velocities. Hence odd-order equation solutions can be real functions, while even-order equation solutions are always complex.

Journal ArticleDOI
TL;DR: It is argued that the relationship for the Fano factor of the entropy production rate varσ/meanσ≥2 is the most significant realization of the loose bound.
Abstract: We connect two recent advances in the stochastic analysis of nonequilibrium systems: the (loose) uncertainty principle for the currents, which states that statistical errors are bounded by thermodynamic dissipation, and the analysis of thermodynamic consistency of the currents in the light of symmetries. Employing the large deviation techniques presented by Gingrich et al. [Phys. Rev. Lett. 116, 120601 (2016)PRLTAO0031-900710.1103/PhysRevLett.116.120601] and Pietzonka, Barato, and Seifert [Phys. Rev. E 93, 052145 (2016)2470-004510.1103/PhysRevE.93.052145], we provide a short proof of the loose uncertainty principle, and prove a tighter uncertainty relation for a class of thermodynamically consistent currents J. Our bound involves a measure of partial entropy production, that we interpret as the least amount of entropy that a system sustaining current J can possibly produce, at a given steady state. We provide a complete mathematical discussion of quadratic bounds which allows one to determine which are optimal, and finally we argue that the relationship for the Fano factor of the entropy production rate varσ/meanσ≥2 is the most significant realization of the loose bound. We base our analysis both on the formalism of diffusions, and of Markov jump processes in the light of Schnakenberg's cycle analysis.

Journal ArticleDOI
TL;DR: The hydrogen principal Hugoniot is insensitive to the explicit XC T dependence because of cancellation between the energy and pressure-volume work difference terms in the Rankine-Hugoniot equation, and the ground-state XC underestimates by about 1000 K.
Abstract: The effects of an explicit temperature dependence in the exchange correlation (XC) free-energy functional upon calculated properties of matter in the warm dense regime are investigated. The comparison is between the Karasiev-Sjostrom-Dufty-Trickey (KSDT) finite-temperature local-density approximation (TLDA) XC functional [Karasiev et al., Phys. Rev. Lett. 112, 076403 (2014)PRLTAO0031-900710.1103/PhysRevLett.112.076403] parametrized from restricted path-integral Monte Carlo data on the homogeneous electron gas (HEG) and the conventional Monte Carlo parametrization ground-state LDA XC [Perdew-Zunger (PZ)] functional evaluated with T-dependent densities. Both Kohn-Sham (KS) and orbital-free density-functional theories are used, depending upon computational resource demands. Compared to the PZ functional, the KSDT functional generally lowers the dc electrical conductivity of low-density Al, yielding improved agreement with experiment. The greatest lowering is about 15% for T=15 kK. Correspondingly, the KS band structure of low-density fcc Al from the KSDT functional exhibits a clear increase in interband separation above the Fermi level compared to the PZ bands. In some density-temperature regimes, the deuterium equations of state obtained from the two XC functionals exhibit pressure differences as large as 4% and a 6% range of differences. However, the hydrogen principal Hugoniot is insensitive to the explicit XC T dependence because of cancellation between the energy and pressure-volume work difference terms in the Rankine-Hugoniot equation. Finally, the temperature at which the HEG becomes unstable is T≥7200 K for the T-dependent XC, a result that the ground-state XC underestimates by about 1000 K.

Journal ArticleDOI
TL;DR: This work discusses the Giardinà-Kurchan-Peliti population dynamics method for evaluating large deviations of time-averaged quantities in Markov processes, and demonstrates substantially improved results in a simple model.
Abstract: We discuss the Giardina-Kurchan-Peliti population dynamics method for evaluating large deviations of time-averaged quantities in Markov processes [Phys. Rev. Lett. 96, 120603 (2006)PRLTAO0031-900710.1103/PhysRevLett.96.120603]. This method exhibits systematic errors which can be large in some circumstances, particularly for systems with weak noise, with many degrees of freedom, or close to dynamical phase transitions. We show how these errors can be mitigated by introducing control forces within the algorithm. These forces are determined by an iteration-and-feedback scheme, inspired by multicanonical methods in equilibrium sampling. We demonstrate substantially improved results in a simple model, and we discuss potential applications to more complex systems.

Journal ArticleDOI
TL;DR: Investigating pedestrian movement properties of crowd with different age compositions finds that traffic jams occur more frequently in mixed group due to the great differences of mobilities and self-adaptive abilities among pedestrians.
Abstract: An aging population is bringing new challenges to the management of escape routes and facility design in many countries. This paper investigates pedestrian movement properties of crowd with different age compositions. Three pedestrian groups are considered: young student group, old people group, and mixed group. It is found that traffic jams occur more frequently in mixed group due to the great differences of mobilities and self-adaptive abilities among pedestrians. The jams propagate backward with a velocity 0.4m/s for global density ρ_{g}≈1.75m^{-1} and 0.3m/s for ρ_{g}>2.3m^{-1}. The fundamental diagrams of the three groups are obviously different from each other and cannot be unified into one diagram by direct nondimensionalization. Unlike previous studies, three linear regimes in mixed group but only two regimes in young student group are observed in the headway-velocity relation, which is also verified in the fundamental diagram. Different ages and mobilities of pedestrians in a crowd cause the heterogeneity of system and influence the properties of pedestrian dynamics significantly. It indicates that the density is not the only factor leading to jams in pedestrian traffic. The composition of crowd has to be considered in understanding pedestrian dynamics and facility design.

Journal ArticleDOI
TL;DR: This work introduces the network geometry with flavor s=-1,0,1 (NGF) describing simplicial complexes defined in arbitrary dimension d and evolving by a nonequilibrium dynamics, and shows that NGF admits a quantum mechanical description in terms of associated quantum network states.
Abstract: Network geometry is attracting increasing attention because it has a wide range of applications, ranging from data mining to routing protocols in the Internet. At the same time advances in the understanding of the geometrical properties of networks are essential for further progress in quantum gravity. In network geometry, simplicial complexes describing the interaction between two or more nodes play a special role. In fact these structures can be used to discretize a geometrical d-dimensional space, and for this reason they have already been widely used in quantum gravity. Here we introduce the network geometry with flavor s=-1,0,1 (NGF) describing simplicial complexes defined in arbitrary dimension d and evolving by a nonequilibrium dynamics. The NGF can generate discrete geometries of different natures, ranging from chains and higher-dimensional manifolds to scale-free networks with small-world properties, scale-free degree distribution, and nontrivial community structure. The NGF admits as limiting cases both the Bianconi-Barabasi models for complex networks, the stochastic Apollonian network, and the recently introduced model for complex quantum network manifolds. The thermodynamic properties of NGF reveal that NGF obeys a generalized area law opening a new scenario for formulating its coarse-grained limit. The structure of NGF is strongly dependent on the dimensionality d. In d=1 NGFs grow complex networks for which the preferential attachment mechanism is necessary in order to obtain a scale-free degree distribution. Instead, for NGF with dimension d>1 it is not necessary to have an explicit preferential attachment rule to generate scale-free topologies. We also show that NGF admits a quantum mechanical description in terms of associated quantum network states. Quantum network states evolve by a Markovian dynamics and a quantum network state at time t encodes all possible NGF evolutions up to time t. Interestingly the NGF remains fully classical but its statistical properties reveal the relation to its quantum mechanical description. In fact the δ-dimensional faces of the NGF have generalized degrees that follow either the Fermi-Dirac, Boltzmann, or Bose-Einstein statistics depending on the flavor s and the dimensions d and δ.

Journal ArticleDOI
TL;DR: Numerical evidence is provided that a sharp change in particle dynamics during large-amplitude oscillatory shear of a simple model for soft jammed solids corresponds to a nonequilibrium first-order dynamic phase transition, thus establishing the existence of a well-defined microscopic dynamic signature of the yielding transition in amorphous materials in oscillatoryShear.
Abstract: We use computer simulations to analyze the yielding transition during large-amplitude oscillatory shear of a simple model for soft jammed solids. Simultaneous analysis of global mechanical response and particle-scale motion demonstrates that macroscopic yielding, revealed by a smooth crossover in mechanical properties, is accompanied by a sudden change in the particle dynamics, which evolves from nondiffusive motion to irreversible diffusion as the amplitude of the shear is increased. We provide numerical evidence that this sharp change corresponds to a nonequilibrium first-order dynamic phase transition, thus establishing the existence of a well-defined microscopic dynamic signature of the yielding transition in amorphous materials in oscillatory shear.

Journal ArticleDOI
TL;DR: It is shown that Carnot efficiency cannot be reached whenever quantum coherence effects are present, i.e., when the Hamiltonian used for work extraction does not commute with the bare system Hamiltonian, which implies universal bounds on efficiency and power of quantum heat engines.
Abstract: The thermodynamics of quantum systems coupled to periodically modulated heat baths and work reservoirs is developed. By identifying affinities and fluxes, the first and the second law are formulated consistently. In the linear response regime, entropy production becomes a quadratic form in the affinities. Specializing to Lindblad dynamics, we identify the corresponding kinetic coefficients in terms of correlation functions of the unperturbed dynamics. Reciprocity relations follow from symmetries with respect to time reversal. The kinetic coefficients can be split into a classical and a quantum contribution subject to an additional constraint, which follows from a natural detailed balance condition. This constraint implies universal bounds on efficiency and power of quantum heat engines. In particular, we show that Carnot efficiency cannot be reached whenever quantum coherence effects are present, i.e., when the Hamiltonian used for work extraction does not commute with the bare system Hamiltonian. For illustration, we specialize our universal results to a driven two-level system in contact with a heat bath of sinusoidally modulated temperature.

Journal ArticleDOI
TL;DR: An analysis of two-dimensional (2D) matter-wave solitons, governed by the pseudospinor system of Gross-Pitaevskii equations with self- and cross attraction, which includes the spin-orbit coupling (SOC) in the general Rashba-Dresselhaus form and, separately, the Rashba coupling and the Zeeman splitting.
Abstract: We present an analysis of two-dimensional (2D) matter-wave solitons, governed by the pseudospinor system of Gross-Pitaevskii equations with self- and cross attraction, which includes the spin-orbit coupling (SOC) in the general Rashba-Dresselhaus form, and, separately, the Rashba coupling and the Zeeman splitting. Families of semivortex (SV) and mixed-mode (MM) solitons are constructed, which exist and are stable in free space, as the SOC terms prevent the onset of the critical collapse and create the otherwise missing ground states in the form of the solitons. The Dresselhaus SOC produces a destructive effect on the vortex solitons, while the Zeeman term tends to convert the MM states into the SV ones, which eventually suffer delocalization. Existence domains and stability boundaries are identified for the soliton families. For physically relevant parameters of the SOC system, the number of atoms in the 2D solitons is limited by $\ensuremath{\sim}1.5\ifmmode\times\else\texttimes\fi{}{10}^{4}$. The results are obtained by means of combined analytical and numerical methods.

Journal ArticleDOI
TL;DR: A new chimera pattern is discovered, namely the imperfect traveling chimera state, where the incoherent traveling domain spreads into the coherent domain of the network, in a network of neuronal oscillators coupled through local, synaptic gradient coupling.
Abstract: In this paper, we report the occurrence of chimera patterns in a network of neuronal oscillators, which are coupled through local, synaptic gradient coupling. We discover a new chimera pattern, namely the imperfect traveling chimera state, where the incoherent traveling domain spreads into the coherent domain of the network. Remarkably, we also find that chimera states arise even for one-way local coupling, which is in contrast to the earlier belief that only nonlocal, global, or nearest-neighbor local coupling can give rise to chimera state; this find further relaxes the essential connectivity requirement of getting a chimera state. We choose a network of identical bursting Hindmarsh-Rose neuronal oscillators, and we show that depending upon the relative strength of the synaptic and gradient coupling, several chimera patterns emerge. We map all the spatiotemporal behaviors in parameter space and identify the transitions among several chimera patterns, an in-phase synchronized state, and a global amplitude death state.

Journal ArticleDOI
TL;DR: P perturbation theory results are concluded that describe the limit of large directional bias, when all states are extended, in N-site banded one-dimensional non-Hermitian random matrices that arise naturally in sparse neural networks.
Abstract: We explore the spectra and localization properties of the N-site banded one-dimensional non-Hermitian random matrices that arise naturally in sparse neural networks. Approximately equal numbers of random excitatory and inhibitory connections lead to spatially localized eigenfunctions and an intricate eigenvalue spectrum in the complex plane that controls the spontaneous activity and induced response. A finite fraction of the eigenvalues condense onto the real or imaginary axes. For large N, the spectrum has remarkable symmetries not only with respect to reflections across the real and imaginary axes but also with respect to 90^{∘} rotations, with an unusual anisotropic divergence in the localization length near the origin. When chains with periodic boundary conditions become directed, with a systematic directional bias superimposed on the randomness, a hole centered on the origin opens up in the density-of-states in the complex plane. All states are extended on the rim of this hole, while the localized eigenvalues outside the hole are unchanged. The bias-dependent shape of this hole tracks the bias-independent contours of constant localization length. We treat the large-N limit by a combination of direct numerical diagonalization and using transfer matrices, an approach that allows us to exploit an electrostatic analogy connecting the "charges" embodied in the eigenvalue distribution with the contours of constant localization length. We show that similar results are obtained for more realistic neural networks that obey "Dale's law" (each site is purely excitatory or inhibitory) and conclude with perturbation theory results that describe the limit of large directional bias, when all states are extended. Related problems arise in random ecological networks and in chains of artificial cells with randomly coupled gene expression patterns.

Journal ArticleDOI
TL;DR: An upper bound on the current large deviation function is obtained, which is compared to a recently derived entropic bound, and the low-noise limit of large deviations is studied.
Abstract: We study the large deviations of the time-integrated current for a driven diffusion on the circle, often used as a model of nonequilibrium systems. We obtain the large deviation functions describing the current fluctuations using a Fourier-Bloch decomposition of the so-called tilted generator, and we also construct from this decomposition the effective (biased, auxiliary, or driven) Markov process describing the diffusion as current fluctuations are observed in time. This effective process provides a clear physical explanation of the various fluctuation regimes observed. It is used here to obtain an upper bound on the current large deviation function, which we compare to a recently derived entropic bound, and to study the low-noise limit of large deviations.