Showing papers in "Plant and Soil in 2012"

Effect of biochar amendment on maize yield and greenhouse gas emissions from a soil organic carbon poor calcareous loamy soil from Central China Plain

Abstract: Aims A field experiment was conducted to investigate the effect of biochar on maize yield and greenhouse gases (GHGs) in a calcareous loamy soil poor in organic carbon from Henan, central great plain, China.

Decreased soil microbial biomass and nitrogen mineralisation with Eucalyptus biochar addition to a coarse textured soil

Abstract: Biochar has been shown to aid soil fertility and crop production in some circumstances. We investigated effects of the addition of Jarrah (Eucalyptus marginata) biochar to a coarse textured soil on soil carbon and nitrogen dynamics. Wheat was grown for 10 weeks, in soil treated with biochar (0, 5, or 25 t ha−1) in full factorial combination with nitrogen (N) treatments (organic N, inorganic N, or control). Samples were analysed for plant biomass, soil microbial biomass carbon (MBC) and nitrogen (MBN), N mineralisation, CO2 evolution, community level physiological profiles (CLPP) and ammonia oxidising bacterial community structure. MBC significantly decreased with biochar addition while MBN was unaltered. Net N mineralisation was highest in control soil and significantly decreased with increasing addition of biochar. These findings could not be attributed to sorption of inorganic N to biochar. CO2 evolution decreased with 5 t ha−1 biochar but not 25 t ha−1. Biochar addition at 25 t ha−1 changed the CLPP, while the ammonia oxidising bacterial community structure changed only when biochar was added with a N source. We conclude that the activity of the microbial community decreased in the presence of biochar, through decreased soil organic matter decomposition and N mineralisation which may have been caused by the decreased MBC.

Biochar adsorbed ammonia is bioavailable

Abstract: Biochar is produced as a by-product of the low temperature pyrolysis of biomass during bioenergy extraction and its incorporation into soil is of global interest as a potential carbon sequestration tool. Biochar influences soil nitrogen transformations and its capacity to take up ammonia is well recognized. Anthropogenic emissions of ammonia need to be mitigated due to negative environmental impacts and economic losses. Here we use an isotope of nitrogen to show that ammonia-N adsorbed by biochar is stable in ambient air, but readily bioavailable when placed in the soil. When biochars, containing adsorbed 15N labelled ammonia, were incorporated into soil the 15N recovery by roots averaged 6.8% but ranged from 26.1% to 10.9% in leaf tissue due to differing biochar properties with plant 15N recovery greater when acidic biochars were used to capture ammonia. Recovery of 15N as total soil nitrogen (organic+inorganic) ranged from 45% to 29% of 15N applied. We provide a proof of concept for a synergistic mitigation option where anthropogenic ammonia emissions could be captured using biochar, and made bioavailable in soils, thus leading to nitrogen capture by crops, while simultaneously sequestering carbon in soils.

Developing X-ray Computed Tomography to non-invasively image 3-D root systems architecture in soil

Abstract: The need to observe roots in their natural undisturbed state within soil, both spatially and temporally, is a challenge that continues to occupy researchers studying the rhizosphere. This paper reviews how over the last 30 years the application of X-ray Computed Tomography (CT) has demonstrated considerable promise for root visualisation studies. We describe how early CT work demonstrated that roots could be visualised within soils, but was limited by resolution (ca. 1 mm). Subsequent work, utilising newer micro CT scanners, has been able to achieve higher resolutions (ca. 50 μm) and enhance imaging capability in terms of detecting finer root material. However the overlap in the attenuation density of root material and soil pore space has been a major impediment to the uptake of the technology. We then outline how sophisticated image processing techniques, frequently based on object tracking methods, have demonstrated great promise in overcoming these obstacles. This, along with the concurrent advances in scan and reconstruction times, image quality and resolution (ca. 0.5 μm) have opened up new opportunities for the application of X-ray CT in experimental studies of root and soil interactions. We conclude that CT is well placed to contribute significantly to unravelling the complex interactions between roots and soil.

Harnessing the rhizosphere microbiome through plant breeding and agricultural management

Abstract: The need to enhance the sustainability of intensive agricultural systems is widely recognized One promising approach is to encourage beneficial services provided by soil microorganisms to decrease the inputs of fertilizers and pesticides. However, limited success of this approach in field applications raises questions as to how this might be best accomplished. We highlight connections between root exudates and the rhizosphere microbiome, and discuss the possibility of using plant exudation characteristics to selectively enhance beneficial microbial activities and microbiome characteristics. Gaps in our understanding and areas of research that are vital to our ability to more fully exploit the soil microbiome for agroecosystem productivity and sustainability are also discussed. This article outlines strategies for more effectively exploiting beneficial microbial services on agricultural systems, and cals attention to topics that require additional research.

Predicting phosphorus bioavailability from high-ash biochars

Abstract: Biochars are highly variable in nutrient composition and availability, which are determined by types of feedstock and pyrolysis conditions. The aim of this research was to (a) study the bioavailability of phosphorus (P) in biochars using different feedstocks and pyrolysis conditions; (b) develop a robust chemical method for biochar P availability measurements. In the present study, (a) chemical analysis – including total P and extractable P (2% citric acid, 2% formic acid, and neutral ammonium citrate extraction), and (b) a bioassay test using rye-grass grown in a P deficient sandy soil were used to compare the P bioavailability of different biochars. Biochars were produced from two different feedstocks (dairy manure-wood mixture, MAe; biosolid-wood mixture, BSe) at four different pyrolysis temperatures (250, 350, 450, and 550°C). Results showed that P in feedstock was fully recovered in the biochars. After 6 harvests, the biochars were as effective as the P fertilizers tested [Sechura phosphate rocks (SPR) and calcium dihydrogen phosphate (CaP)] in increasing the shoot yield. However, P uptake followed the order of CaP >MAe biochars >BSe biochars >SPR, on a same TP basis. Based on the Mitscherlich equation, 2% formic acid was the most sensitive indicator of P bioavailability in biochars. The results suggest that high-ash biochars with high P concentrations are potential P sources with high-agronomic efficiency. We propose the use of 2% formic acid extraction to predict the availability of P in ash-rich biochars.

Biochar’s role as an alternative N-fertilizer: ammonia capture

Abstract: Biochar’s role as a carbon sequestration agent, while simultaneously providing soil fertility improvements when used as an amendment, has been receiving significant attention across all sectors of society, ranging from academia, industry, government, as well as the general public. This has lead to some exaggeration and possible confusion regarding biochar’s actual effectiveness as a soil amendment. One sparsely explored area where biochar appears to have real potential for significant impact is the soil nitrogen cycle. Taghizadeh-Toosi et al. (this issue) examined ammonia sorption on biochar as a means of providing a nitrogen-enriched soil amendment. The longevity of the trapped ammonia was particularly remarkable; it was sequestered in a stable form for at least 12 days under laboratory air flow. Furthermore, the authors observed increased 15N uptake by plants grown in soil amended with the 15N-enriched biochar, indicating that the 15N was not irreversibly bound, but, was plant-available. Their observations add credence to utilizing biochar as a carrier for nitrogen fertilization, while potentially reducing the undesired environmental consequences through gas emissions, overland flow, and leaching.

Effects of biochar amendment in two soils on greenhouse gas emissions and crop production

Abstract: Background Worldwide, there is an increasing interest in using biochar in agriculture to help mitigate global warming and improve crop productivity.

Hydrogen sulfide enhances alfalfa (Medicago sativa) tolerance against salinity during seed germination by nitric oxide pathway

Abstract: Aims and methods The molecular mechanisms and signal transduction pathways of hydrogen sulfide (H2S) in plant biology are still unclear. Here, by using pharmacological and biochemical approaches, we report that H2S promotes germination and alleviates salinity damage involving nitric oxide (NO) pathway.

The roots of the halophyte Salicornia brachiata are a source of new halotolerant diazotrophic bacteria with plant growth-promoting potential

Abstract: Soil salinity is the major cause limiting plant productivity worldwide. Nitrogen-fixing bacteria were enriched and characterised from roots of Salicornia brachiata, an extreme halophyte which has substantial economic value as a bioresource of diverse and valuable products. Nitrogen-free semisolid NFb medium with malate as carbon source and up to 4% NaCl were used for enrichment and isolation of diazotrophic bacteria. The isolates were tested for plant growth-promoting traits and 16S rRNA, nifH and acdS genes were analysed. For selected strains, plant growth-promoting activities were tested in axenically grown Salicornia seedlings at different NaCl concentrations (0–0.5M). New halotolerant diazotrophic bacteria were isolated from roots of S. brachiata. The isolates were identified as Brachybacterium saurashtrense sp. nov., Zhihengliuella sp., Brevibacterium casei, Haererehalobacter sp., Halomonas sp., Vibrio sp., Cronobacter sakazakii, Pseudomonas spp., Rhizobium radiobacter, and Mesorhizobium sp. Nitrogen fixation as well as plant growth-promoting traits such as indole acetic acid (IAA) production, phosphate solubilisation, and 1-aminocyclopropane-1-carboxylic acid (ACC) deaminase activity were demonstrated. For Brachybacterium saurashtrense and Pseudomonas sp., significant plant growth-promoting activities were observed in Salicornia in salt stress conditions. Salicornia brachiata is a useful source of new halotolerant diazotrophic bacteria with plant growth-promoting potential.

Biofortification of wheat with zinc through zinc fertilization in seven countries

Abstract: Aim Zinc (Zn) fertilization is an effective agronomic tool for Zn biofortification of wheat for overcoming human Zn deficiency. But it still needs to be evaluated across locations with different management practices and wheat cultivars, since grain Zn concentrations may be significantly affected by locations, cultivars and management.

Biochars influence seed germination and early growth of seedlings

Abstract: Biochar can be produced from a wide range of organic sources with varying nutrient and metal concentrations. Before making irreversible applications of biochar to soil, a preliminary ecotoxicological assessment is desirable. First, we determined the effect of biochar type and rate on early growth of wheat in a soil-less Petri dish bioassay. Second, we investigated the effect of the same biochars on seed germination and early growth of wheat in ten soils with varying texture using a glasshouse bioassay. Finally, we investigated whether these biochars had similar effects on three plant species when grown in one soil. Biochar type and application rate influenced wheat seed germination and seedling growth in a similar manner in both the soil-less Petri dish and soil-based bioassay. Germination and early root growth of mung bean and subterranean clover differed from that of wheat in response to the five biochars. We recommend use of the soil-less Petri dish bioassay as a rapid and simple preliminary test to identify potential toxicity of biochars on seed germination and early plant growth prior to biochar application to soil.

Nanoscale organo-mineral reactions of biochars in ferrosol: an investigation using microscopy

Abstract: Aims In this study, a chicken manure biochar (CM biochar) and a paper sludge biochar (PS biochar), prepared under similar treatment conditions, were amended into ferrosol as part of an agronomic field trial. The aim of this study is to investigate interactions between these biochars and the soil after a 3 month trial. Methods Soil samples following field trials were taken and biochar was separated from the soil, and studied for both surface oxidation and the degree of interaction with surrounding soil by X-ray photoelectron spectroscopy (XPS), SEM and TEM equipped with EDS for elemental analysis. Results Following incubation in field soil, both biochars showed that soil mineral incorporation on to their surfaces occurred within the first year, although the attachment was localized at specific sites on the surface. A relatively high concentration of Al was found at the interface between the biochar and mineral phases in both aged biochars, indicating a binding role of Al. For the CM biochar, a soil-iron redox reaction may be associated with the formation of biocharmineral complexes due to the relatively higher labile carbon content and higher pH value of this biochar. Conclusions Soilmineralattachmentmayoccurdirectly on to the biochar surface because of the formation of carboxylic and phenolic functional groups on the aged CM biochar surface by an oxidation reaction. For the PS biochar, adsorption of organic matter from the soil facilitated interactions between the biochar and mineral phases in the soil. Calcium is believed to be important in this process.

Zinc nutrition in rice production systems: a review

Abstract: Zinc (Zn) deficiency is one of the important abiotic factors limiting rice productivity worldwide and also a widespread nutritional disorder affecting human health. Given that rice is a staple for populations in many countries, studies of Zn dynamics and management in rice soils is of great importance. Changing climate is forcing the growers to switch from conventional rice transplanting in flooded soils to water-saving cultivation, including aerobic rice culture and alternate wetting and drying system. As soil properties are changed with altered soil and water management, which is likely to affect Zn solubility and plant availability and should be considered before Zn management in rice. In this review, we critically appraise the role of Zn in plant biology and its dynamics in soil and rice production systems. Strategies and options to improve Zn uptake and partitioning efficiency in rice by using agronomic, breeding and biotechnological tools are also discussed. Although soil application of inorganic Zn fertilizers is widely used, organic and chelated sources are better from economic and environmental perspectives. Use of other methods of Zn application (such as seed treatment, foliar application etc., in association with mycorrhizal fungi) may improve Zn-use efficiency in rice. Conventional breeding together with modern genomic and biotechnological tools may result in development of Zn-efficient rice genotypes that should be used in conjunction with judicious fertilization to optimize rice yield and grain Zn content.

Biochar mediates systemic response of strawberry to foliar fungal pathogens

Abstract: Background and Aims Various biochars added to soil have been shown to improve plant performance. Moreover, a wood biochar was found to induce tomato and pepper plant systemic resistance to two foliar fungal pathogens. The aim of this study was to explore the ability of wood biochar and greenhouse waste biochar to induce systemic resistance in strawberry plants against Botrytis cinerea, Colletotrichum acutatum and Podosphaera apahanis, and to examine at the molecular level some of their impacts on plant defense mechanisms.

Biofortification of rice grain with zinc through zinc fertilization in different countries

Abstract: Increasing zinc (Zn) concentration of rice seed has potential benefits for human nutrition and health. Enhanced levels of Zn in grain also contributes greatly to crop production through better germination and seedling vigor of rice plants grown on soils with limited Zn supply. This study evaluated the effect of soil and/or foliar Zn fertilizer application on grain yield and grain Zn concentration of rice grown in 17 field trials conducted in 2008 to 2010 in China, India, Lao PDR, Thailand and Turkey on soils ranging in pH from 4.8 to 8.8 and DTPA- extractable Zn from 0.5 to 6.5 mg kg−1. Zinc fertilization had little effect on rice grain yield with the exception of increases of up to 10 % in some locations in China and India. As an average of all trials, Zn application increased grain yield by about 5 %. Grain Zn concentrations were, however, more effectively increased by Zn fertilization, especially with foliar Zn applications. On average, Zn concentration in brown rice (whole caryopsis with husk removed) was increased by 25 % and 32 % by foliar and foliar + soil Zn applications, respectively, and only 2.4 % by soil Zn application. The Zn concentration of un-husked rice (whole grain with husk), which was increased by 66 % by foliar Zn, showed a close association with the Zn in brown and white rice, indicating a possible penetration of Zn from the husk into the inner layers of the rice endosperm. Increase in grain Zn concentration by foliar Zn spray was significantly affected by the timing of the foliar application. More distinct increases in grain Zn by foliar Zn application were achieved when Zn was applied after flowering time, e.g., at early milk plus dough stages. Foliar Zn spray offers a practical and useful means for an effective biofortification of rice grain with Zn. This practice consistently and significantly contributed to increases in grain Zn of rice irrespective of cultivars, environmental conditions and management practices in 5 different countries.

Root growth promotion by humic acids from composted and non-composted urban organic wastes

Abstract: Background and aims Besides general effect of organic residues on soil quality and plant crop, hormonal direct effect on plant growth by extracted humic acids of organic materials is interesting and profitable theme. In the present work, we studied on direct interaction between humic acid and root growth, depending on different origin of organic materials.

Nature and nurture: the importance of seed phosphorus content

Abstract: Low phytoavailability of phosphorus (P) limits crop production worldwide. Increasing seed P content can improve plant establishment and increase yields. This is thought to be a consequence of faster initial root growth, which gives seedlings earlier access to growth-limiting resources, such as water and mineral elements. It can be calculated that seed P reserves can sustain maximal growth of cereal seedlings for several weeks after germination, until the plant has three or more leaves and an extensive root system. In this issue of Plant and Soil, Muhammad Nadeem and colleagues report (1) that measurable P uptake by roots of maize seedlings begins about 5 d after germination, (2) that the commencement of root P uptake is coincident with the transition from carbon heterotrophy to carbon autotrophy, and (3) that neither the timing nor the rate of uptake of exogenous P by the developing root system is influenced by initial seed P content. Here it is hypothesised that the delay in P acquisition by roots of maize seedlings might be explained if the expression of genes encoding phosphate transporters is not upregulated either (1) because the plant has sufficient P for growth or (2) because a systemic signal from the shoot, which relies on photosynthesis or phloem development, is not produced, translocated or perceived.

Nitrogen transfer from forage legumes to nine neighbouring plants in a multi-species grassland

Abstract: Legumes play a crucial role in nitrogen supply to grass-legume mixtures for ruminant fodder. To quantify N transfer from legumes to neighbouring plants in multi-species grasslands we established a grass-legume-herb mixture on a loamy-sandy site in Denmark. White clover (Trifolium repens L.), red clover (Trifolium pratense L.) and lucerne (Medicago sativa L.) were leaf-labelled with 15N enriched urea during one growing season. N transfer to grasses (Lolium perenne L. and xfestulolium), white clover, red clover, lucerne, birdsfoot trefoil (Lotus corniculatus L.), chicory (Cichorium intybus L.), plantain (Plantago lanceolata L.), salad burnet (Sanguisorba minor L.) and caraway (Carum carvi L.) was assessed. Neighbouring plants contained greater amounts of N derived from white clover (4.8 g m-2) compared with red clover (2.2 g m-2) and lucerne (1.1 g m-2). Grasses having fibrous roots received greater amounts of N from legumes than dicotyledonous plants which generally have taproots. Slurry application mainly increased N transfer from legumes to grasses. During the growing season the three legumes transferred approximately 40 kg N ha-1 to neighbouring plants. Below-ground N transfer from legumes to neighbouring plants differed among nitrogen donors and nitrogen receivers and may depend on root characteristics and regrowth strategies of plant species in the multi-species grassland.

Crop residue phosphorus: speciation and potential bio-availability

Abstract: Phosphorus (P) mineralisation from crop residues is usually predicted from total P or carbon: phosphorus (C: P) ratios. However, these measures have limited accuracy as they do not take into account the presence of different P species that may be mineralised at different rates. In this study P speciation was determined using solution 31P nuclear magnetic resonance (NMR) spectroscopy to understand the potential fate of residue P in soils. Mature above-ground biomass of eight different crops sampled from the field was portioned into stem, chaff and seed. The main forms of P detected in stem and chaff were orthophosphate (25–75 %), phospholipids (10–40 %) and RNA (5–30 %). Phytate was the dominant P species in seeds, and constituted up to 45 % of total P in chaff but was only detected in minor amounts (<1 %) in stem residue. The majority (65–95 %) of P in stems was water-extractable, and most of this was detected as orthophosphate. However, this includes organic P that may have been hydrolysed during the water extraction. This study indicates that the majority of residue P in aboveground plant residues has the potential to be delivered to soil in a form readily available to plants and soil microorganisms.

A wood based low-temperature biochar captures NH3-N generated from ruminant urine-N, retaining its bioavailability

Abstract: Aims Ammonia (NH3) can be volatilised from the soil surface following the surface application of nitrogenous fertilisers or ruminant urine deposition. The volatilisation of NH3 is of agronomic and environmental concern, since NH3-N is a form of reactive nitrogen. Ammonia adsorption onto biochar has the potential to mitigate NH3 losses, but to date no studies have examined the potential for reducing NH3 losses when biochar is present in the soil matrix.

Biological nitrogen fixation and phosphate solubilization by bacteria isolated from tropical soils

Abstract: In addition to fixing atmospheric nitrogen, some bacterial isolates can also solubilize insoluble phosphates, further contributing to plant growth. The objectives of this study were the following: isolate, select, and identify nodulating bacteria in the cowpea that are efficient not only in biological nitrogen fixation (BNF) but also in the solubilization of insoluble inorganic phosphates; identify and quantify the organic acids produced; and establish the relationship between those acids and the solubilizing capacity. The bacteria were captured from two soils containing high concentrations of insoluble phosphorus from the cities of Lavras and Patos de Minas, using the cowpea [Vigna unguiculata (L.) Walp.] as bait. We obtained 78 strains, which were characterized according to their cultural attributes in culture medium 79 with the strains UFLA 03-84, INPA 03-11B, and BR3267 (approved by the Ministry of Livestock and Supply Agriculture—MAPA, as inoculants for the cowpea) and Burkholderia cepacia (LMG1222T), which was used as a positive control for phosphate solubilization. Strains that were selected for their efficiency in both processes were identified by 16S rDNA sequence analysis. We evaluated the symbiotic efficiency (BNF) in a greenhouse and the solubilization efficiency of CaHPO4, Al(H2PO4)3, and FePO4.2H2O in solid and liquid GELP media. Strains that excelled at the solubilization of these phosphate sources were also evaluated for the production of the following organic acids: oxalic, citric, gluconic, lactic, succinic, and propionic. The presence of Acinetobacter, Bacillus, Firmicutes, Microbacterium, Paenibacillus, and Rhizobium was detected by 16S rDNA sequencing and analysis. Bacterial strains obtained from cowpea nodules varied greatly in the efficiency of their BNF and phosphate solubilization processes, especially in the strains UFLA 03-09, UFLA 03-10, UFLA 03-12, and UFLA 03-13, which were more efficient in both processes. More strains were able to solubilize insoluble inorganic calcium and iron phosphates in liquid medium than in solid medium. The production of organic acids was related to the solubilization of CaHPO4 and FePO4.2H2O for some strains, and the type and concentration of the acid influenced this process. These are the first results obtained with bacterial isolates from tropical soils in which the production of organic acids was detected and quantified to examine the solubilization of insoluble inorganic phosphates.

Varietal differences of quinoa’s tolerance to saline conditions

Abstract: This study aimed to assess varietal differences of quinoa’s tolerance to salinity and to investigate physiological mechanisms conferring these differences. Production of biomass in fourteen varieties grown under saline conditions was analysed in a pot experiment. For two contrasting varieties, the Danish variety Titicaca and the Bolivian variety Utusaya gas exchange, chlorophyll content index (CCI), fluorescence and ion relations were studied. Responses to salinity differed greatly among the varieties; least affected were two varieties from the Bolivian altiplano and a variety from Peru. Titicaca and Utusaya both had substantially increased K+ concentrations in the leaf sap. But, Utusaya was much more efficient in restricting xylem Na+ loading. Xylem Na+ and K+ loading were found to be uncoupled. Utusaya maintained a relatively high stomatal conductance resulting in an only 25% NaCl-induced reduction in net CO2 assimilation compared to a 67% reduction in salt treated Titicaca plants. Maximum photochemical efficiency of PSII was not affected by salinity. In addition to maintaining high gas exchange, tolerant varieties better control xylem Na+ loading. To what extent this control is related to radial root Na+ uptake or to the activity of Na+/H+-exchangers at the xylem parenchyma boundary remains to be studied.

The contribution of nitrogen fixation to sugarcane (Saccharum officinarum L.), and the identification and characterization of part of the associated diazotrophic bacterial community

Abstract: Rhizospheric, epiphytic and endophytic bacteria are associated with several non-legumes, colonizing their surface and inner tissues. Many of these bacteria are beneficial to their hosts, and are collectively termed plant growth-promoting rhizobacteria (PGPR). Recent interest has focused particularly upon PGPR that are endophytic (i.e. PGPE), and which have been reported to be associated with important crops such as rice, wheat and sugarcane. Different mechanisms are involved in bacteria-induced plant growth promotion (PGP), including biological nitrogen fixation (BNF), mineral solubilization, production of phytohormones and pathogen biocontrol. In Uruguay, sugarcane (Saccharum officinarum L.) is considered a strategic multipurpose crop, used for bioenergy, feed, sugar and bioethanol production. The aim of this work was to estimate the BNF contribution to Uruguayan sugarcane cultivars, as well as to identify and characterize the (culturable) putatively endophytic diazotrophic bacteria associated with these varieties. Results using the 15N-dilution technique have shown that these sugarcane varieties obtain significant inputs of N from BNF (34.8–58.8% Ndfa). In parallel, a collection of 598 isolates of potentially endophytic diazotrophs was obtained from surface-sterilized stems using standard isolation techniques, and nifH + isolates from these were the subject of further studies. The bacteria were shown to belong to several genera, including Pseudomonas, Stenotrophomonas, Xanthomonas, Acinetobacter, Rhanella, Enterobacter, Pantoea, Shinella, Agrobacterium and Achromobacter. Additionally, some PGP features were studied in 35 selected isolates. The data obtained in this study represent the initial steps in a program aimed at determining the mechanisms of PGP of non-legume crops in Uruguay (such as sugarcane) with potentially beneficial plant-associated bacteria.

High surface area biochar negatively impacts herbicide efficacy

Abstract: Background and Aims Amendment of soil by biochar may reduce efficacy of soil-applied herbicides due to sorption.

The importance of root-produced volatiles as foraging cues for entomopathogenic nematodes

Abstract: Entomopathogenic nematodes (EPNs) are tiny parasitic worms that parasitize insects, in which they reproduce. Their foraging behavior has been subject to numerous studies, most of which have proposed that, at short distances, EPNs use chemicals that are emitted directly from the host as host location cues. Carbon dioxide (CO2) in particular has been implicated as an important cue. Recent evidence shows that at longer distances several EPNs take advantage of volatiles that are specifically emitted by roots in response to insect attack. Studies that have revealed these plant-mediated interactions among three trophic levels have been met with some disbelief. This review aims to take away this skepticism by summarizing the evidence for a role of root volatiles as foraging cues for EPNs. To reinforce our argument, we conducted olfactometer assays in which we directly compared the attraction of an EPN species to CO2 and two typical inducible root volatiles. The combination of the ubiquitous gas and a more specific root volatile was found to be considerably more attractive than one of the two alone. Hence, future studies on EPN foraging behavior should take into account that CO2 and plant volatiles may work in synergy as attractants for EPNs. Recent research efforts also reveal prospects of exploiting plant-produced signals to improve the biological control of insect pests in the rhizosphere.

Mitigating zinc deficiency and achieving high grain Zn in rice through integration of soil chemistry and plant physiology research

Abstract: Zinc deficiency has been recognized as an important factor affecting both human health and crop production. Rice (Oryza sativa) is relevant to both concerns, as it is susceptible to soil Zn deficiency and is a staple food for some of the Zn-deficient human population. Improving the processes by which Zn moves from the soil into the plant and eventually into the edible part of the grain has the potential to mitigate problems associated with Zn deficiency in crops and humans. This review article focuses on soil- and plant-related processes affecting Zn chemistry in rice-grown soils and Zn uptake and transport in a rice plant. This review covers advances in soil chemistry regarding the reasons for inconsistent Zn deficiency in rice soils and the limitations of soil test methods for predicting Zn response for rice. We then review advances in plant physiology related to root Zn uptake and internal Zn distribution mechanisms in rice and explore interactions between specific root processes and the soil chemistry of particular environments. We aim to provide an overview of the soil science research for plant scientists and vice versa, in order to promote and facilitate future interdisciplinary collaborations. Priority research areas to fill in knowledge gaps are: 1) improving our ability to predict Zn deficiency in rice soils, 2) understanding the relationship between Zn-deficiency tolerance mechanisms and grain Zn accumulation, 3) exploring the effectiveness of root Zn uptake mechanisms in contrasting soil environments.

Evidence from field nitrogen balance and 15N natural abundance data for the contribution of biological N2 fixation to Brazilian sugarcane varieties.

Abstract: Aims In Brazil N fertilization of sugarcane (Saccharum spp.) is low compared to most other countries. 15N-aided studies and the occurrence of many N2-fixing bacteria associated with cane plants suggest significant contributions from biological N2 fixation (BNF). The objective of this study was to evaluate BNF contributions to nine cane varieties under field conditions using N balance and 15N natural abundance techniques.

How does drought stress influence the decomposition of plant litter with contrasting quality in a grassland ecosystem

Abstract: Plant litter quality and water availability both control decomposition. The interaction of both parameters was never studied. We used a grassland site, where litter of contrasting quality, i.e. green litter (fresh leaves; high quality) and brown litter (dead leaves, which underwent senescence but which are still attached to the plant; low quality), is returned to soil. Green and brown litter were exposed in the field under regular weather and drought conditions. The objective of this study was to evaluate the effect of drought on the decomposition of both litter types. We incubated green and brown litter of three different grassland species (Lolium perenne, Festuca arundinacea and Dactylis glomerata) alone or as litter mixture (1/3 of each of the three grassland species) in litterbags for 28 weeks. Drought conditions were simulated by rainfall exclusion. After incubation, litter residues were analysed for C and nitrogen (N) content and stable isotope composition. Additionally, we determined the response of the lignin and carbohydrate signatures to the contrasting conditions. C decomposition kinetics of green and brown litter under drought conditions could be explained by two pools of contrasting turnover times. Drought decreased leaf litter C and N decomposition by more than 50% compared to regular weather conditions, mainly by strongly decreasing the decomposition rate constants. The lowest C decomposition occurred for mixtures of litter from all three grassland species. Brown litter showed on average 15% higher reduction in carbon decomposition than green litter following drought. Lignin content remained similar for green and brown litter after drought and regular weather conditions, while sugar content remained similar in green litter and decreased by 18% for brown litter under drought conditions. Our results showed different response of decomposition of litter with contrasting quality to drought. Low quality brown litter is likely to be more affected than high quality green litter. Thus, litter quality must be taken into account, when assessing the effect of drought on decomposition.

Herbaspirillum -plant interactions: microscopical, histological and molecular aspects

Abstract: Diazotrophic species in the genus Herbaspirillum (e.g. H. frisingense, H. rubrisubalbicans and H. seropedicae) associate with several economically important crops in the family Poaceae, such as maize (Zea mays), Miscanthus, rice (Oryza sativa), sorghum (Sorghum bicolor) and sugarcane (Saccharum sp.), and can increase their growth and productivity by a number of mechanisms, including nitrogen fixation. Hence, the improvement and use of these plant growth-promoting bacteria could provide economic and environmental benefits. We review the colonization processes of host plants by Herbaspirillum spp., including histological aspects and molecular mechanisms involved in these interactions, which may be epiphytic, endophytic, and even occasionally pathogenic. Herbaspirillum can recognize plant signals that modulate the expression of colonization traits and plant growth-promoting factors. Although a large proportion of herbaspirilla remain rhizospheric and epiphytic, plant-associated species in this genus are noted for their ability to colonize the plant internal tissues. Endophytic colonization by herbaspirilla begins with the attachment of the bacteria to root surfaces, followed by colonization at the emergence points of lateral roots and penetration through discontinuities of the epidermis; this appears to involve bacterial envelope structures, such as lipopolysaccharide (LPS), exopolysaccharide (EPS), adhesins and the type three secretion system (T3SS), but not necessarily the involvement of cell wall-degrading enzymes. Intercellular spaces are then rapidly occupied, proceeding to colonization of xylem and the aerial parts of the host plants. The response of the host plant includes both the recognition of the bacteria as non-pathogenic and the induction of systemic resistance to pathogens. Phytohormone signaling cascades are also activated, regulating the plant development. This complex molecular communication between some Herbaspirillum spp. and plant hosts can result in plant growth-promotion.