Showing papers in "Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy in 2016"
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TL;DR: Langmuir as the best model for fitting experimental data relevant to BG and EB removal indicates high, economic and profitable adsorption capacity that supports and confirms its applicability for wastewater treatment.
Abstract: In this work, central composite design (CCD) combined with response surface methodology (RSM) and desirability function approach (DFA) gives useful information about operational condition and also to obtain useful information about interaction and main effect of variables concerned to simultaneous ultrasound-assisted removal of brilliant green (BG) and eosin B (EB) by zinc sulfide nanoparticles loaded on activated carbon (ZnS-NPs-AC). Spectra overlap between BG and EB dyes was extensively reduced and/or omitted by derivative spectrophotometric method, while multi-layer artificial neural network (ML-ANN) model learned with Levenberg-Marquardt (LM) algorithm was used for building up a predictive model and prediction of the BG and EB removal. The ANN efficiently was able to forecast the simultaneous BG and EB removal that was confirmed by reasonable numerical value i.e. MSE of 0.0021 and R(2) of 0.9589 and MSE of 0.0022 and R(2) of 0.9455 for testing data set, respectively. The results reveal acceptable agreement among experimental data and ANN predicted results. Langmuir as the best model for fitting experimental data relevant to BG and EB removal indicates high, economic and profitable adsorption capacity (258.7 and 222.2 mg g(-1)) that supports and confirms its applicability for wastewater treatment.
147 citations
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TL;DR: Nonlinear optical (NLO) activity of the compound (2E)-2-(ethoxycarbonyl)-3-[(1-methoxy-1-oxo-3-phenylpropan-2-yl)amino] prop- 2-enoic acid is investigated experimentally and theoretically using X-ray crystallography and quantum chemical calculations.
Abstract: Nonlinear optical (NLO) activity of the compound (2E)-2-(ethoxycarbonyl)-3-[(1-methoxy-1-oxo-3-phenylpropan-2-yl)amino] prop-2-enoic acid is investigated experimentally and theoretically using X-ray crystallography and quantum chemical calculations The NLO activity is confirmed by both powder Second Harmonic Generation (SHG) experiment and first hyper polarizability calculation The title compound displays 8 fold excess of SHG activity when compared with the standard compound KDP The gas phase geometry optimization and vibrational frequencies calculations are performed using density functional theory (DFT) incorporated in B3LYP with 6-311G++(d,p) basis set The title compound crystallizes in non-centrosymmetric space group P21 Moreover, the crystal structure is primarily stabilized through intramolecular N-H···O and O-H···O hydrogen bonds and intermolecular C-H···O and C-H···π interactions These intermolecular interactions are analyzed and quantified using Hirshfeld surface analysis and PIXEL method The detailed vibrational assignments are performed on the basis of the potential energy distributions (PED) of the vibrational modes
128 citations
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TL;DR: The experimental results revealed that the fluorescence quenching mechanism of BSA induced atorvastatin was a combined dynamic and static quench, and the main interaction forces were van der Waals force and hydrogen bonding interaction.
Abstract: The interaction of atorvastatin with bovine serum albumin (BSA) was investigated using multi-spectroscopic methods and molecular docking technique for providing important insight into further elucidating the store and transport process of atorvastatin in the body and the mechanism of action and pharmacokinetics. The experimental results revealed that the fluorescence quenching mechanism of BSA induced atorvastatin was a combined dynamic and static quenching. The binding constant and number of binding site of atorvastatin with BSA under simulated physiological conditions (pH=7.4) were 1.41 × 10(5) M(-1) and about 1 at 310K, respectively. The values of the enthalpic change (ΔH(0)), entropic change (ΔS(0)) and Gibbs free energy (ΔG(0)) in the binding process of atorvastatin with BSA at 310K were negative, suggesting that the binding process of atorvastatin and BSA was spontaneous and the main interaction forces were van der Waals force and hydrogen bonding interaction. Moreover, atorvastatin was bound into the subdomain IIA (site I) of BSA, resulting in a slight change of the conformation of BSA.
125 citations
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TL;DR: Among all samples analysed, the chestnut and valonea showed the greatest similarity, indicating that these extracts contain equivalent chemical compositions and structure and, therefore, similar properties.
Abstract: Tannins are polyphenolic compounds of complex structures formed by secondary metabolism in several plants These polyphenolic compounds have different applications, such as drugs, anti-corrosion agents, flocculants, and tanning agents This study analyses six different type of polyphenolic extracts by Fourier transform infrared spectroscopy (FTIR) combined with multivariate analysis Through both principal component analysis (PCA) and hierarchical cluster analysis (HCA), we observed well-defined separation between condensed (quebracho and black wattle) and hydrolysable (valonea, chestnut, myrobalan, and tara) tannins For hydrolysable tannins, it was also possible to observe the formation of two different subgroups between samples of chestnut and valonea and between samples of tara and myrobalan Among all samples analysed, the chestnut and valonea showed the greatest similarity, indicating that these extracts contain equivalent chemical compositions and structure and, therefore, similar properties
109 citations
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TL;DR: The current investigation demonstrated green engineering method for the synthesis of multifunctional ZnO NPs with interesting morphologies using neem extract.
Abstract: Green synthesis of multifunctional Zinc oxide nanoparticles (NPs) with a variety of morphologies were achieved by low temperature solution combustion route employing neem (Azadirachta indica) extract as fuel. The nanoparticles were characterized by PXRD, FTIR, XPS, Raman and UV-Visible spectroscopic studies. The Morphologies were studied by SEM and TEM analysis. The NPs were subjected for photoluminescence, photocatalytic, antibacterial and antioxidant activity studies. PXRD pattern confirmed the hexagonal wurtzite structure of the product. SEM images indicated the transformation of mushroom like hexagonal disks to bullets, buds, cones, bundles and closed pine cone structured NPs with increase in the concentration of neem extract in reaction mixture. The NPs exhibited prominent green emission due to the presence of intrinsic defect centers. The as-formed bullet shaped ZnO with 4ml of neem extract was found to decolorize Methylene blue (MB) under Sunlight and UV light irradiation. The antibacterial studies indicated that ZnO NPs of concentration 500, 750 and 1000μg resulted in significant antibacterial activity on Klebsiella aerogenes and Staphylococcus aureus but not against Escherichia coli and Pseudomonas aeruginosa in agar well diffusion method. Further, ZnO NPs exhibited significant antioxidant activity against scavenging DPPH free radicals. The current investigation demonstrated green engineering method for the synthesis of multifunctional ZnO NPs with interesting morphologies using neem extract.
108 citations
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TL;DR: This study showed the efficacy of biogenic AgNPs in catalyzing the reduction of direct yellow-12 using NaBH4 and Fourier transform infrared (FT-IR) spectroscopy, X-ray diffraction (XRD) and dynamic light scattering (DLS) with zeta potential.
Abstract: Facile green synthesis of silver nanoparticles (AgNPs) using aqueous bark extract of Terminalia cuneata has been reported in this article. The effects of concentration of the extract, reaction time and pH were studied by UV-Vis spectroscopy. Appearance of yellow color with λmax around ~420 nm suggested the formation of AgNPs. The stable AgNPs were further characterized by Fourier transform infrared (FT-IR) spectroscopy, X-ray diffraction (XRD), dynamic light scattering (DLS) with zeta potential and high resolution transmission electron microscopy (HR-TEM) with energy dispersive X-ray spectroscopy (EDS) analysis. The synthesized AgNPs were in the size range of 25-50 nm with a distorted spherical shape identified from HR-TEM analysis. The catalytic activity of AgNPs on the reduction of direct yellow-12 using NaBH4 was analyzed using a UV-Vis spectrophotometer. This study showed the efficacy of biogenic AgNPs in catalyzing the reduction of direct yellow-12.
102 citations
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TL;DR: The Janus Green B (JGB) adsorption onto homemade ZnO/Zn(OH)2 nanoparticles loaded on activated carbon (AC) which characterized by FESEM and XRD analysis has been reported.
Abstract: The Janus Green B (JGB) adsorption onto homemade ZnO/Zn(OH)2 nanoparticles loaded on activated carbon (AC) which characterized by FESEM and XRD analysis has been reported. Combination of response surface methodology (RSM) and central composite design (CCD) has been employed to model and optimize variables using STATISTICA 10.0 software. The influence of parameters over pH (2.0–8.0), adsorbent (0.004–0.012 g), sonication time (4–8 min) and JGB concentration (3–21 mg L−1) on JGB removal percentage was investigated and their main and interaction contribution was examined. It was revealed that 21 mg L−1 JGB, 0.012 g ZnO/Zn(OH)2-NP-AC at pH 7.0 and 7 min sonication time permit to achieve removal percentage more than 99%. Finally, a good agreement between experimental and predicted values after 7 min was achieved using pseudo-second-order rate equation. The Langmuir adsorption is appropriate for correlation of equilibrium data. The small amount of adsorbent (0.008–0.015 g) is applicable for successful removal of JGB (RE > 99%) in short time (7 min) with high adsorption capacity (81.3–98.03 mg g−1).
100 citations
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TL;DR: Molecular characterization by analytical pyrolysis of selected samples from each wood type confirmed the interpretation of the mechanisms behind the variability in wood composition obtained by the FTIR-ATR.
Abstract: Two archeological wood samples were studied by attenuated total reflectance Fourier transform infrared (FTIR-ATR) spectroscopy. They originate from a shipwreck in Ribadeo Bay in the northwest of Spain and from a beam wood of an old nave of the Cathedral of Segovia in the central Spain. Principal component analysis was applied to the transposed data matrix (samples as columns and spectral bands as rows) of 43 recorded spectra (18 in the shipwreck and 25 in the beam wood). The results showed differences between the two samples, with a larger proportion of carbohydrates and smaller proportion of lignin in the beam than in the shipwreck wood. Within the beam wood, lignin content was significantly lower in the recent than the old tree rings (P=0.005). These variations can be attributed to species differences between the two woods (oak and pine respectively), with a mixture of guaiacyl and syringyl in hardwood lignin, whereas softwood lignin consists almost exclusively of guaiacyl moieties. The influence of environmental conditions on the FTIR fingerprint was probably reflected by enhanced oxidation of lignin in aerated conditions (beam wood) and hydrolysis of carbohydrates in submerged-anoxic conditions (shipwreck wood). Molecular characterization by analytical pyrolysis of selected samples from each wood type confirmed the interpretation of the mechanisms behind the variability in wood composition obtained by the FTIR-ATR.
98 citations
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TL;DR: Only small dosage of the proposed MOF is considerably capable to remove large amounts of dyes at room temperature and in very short time that is a big advantage of MIL-68(Al) as a promising adsorbent for adsorptive removal processes.
Abstract: MIL-68(Al) as a metal-organic framework (MOF) was synthesized and characterized by different techniques such as SEM, BET, FTIR, and XRD analysis. This material was then applied for simulations removal of malachite green (MG) and methylene blue (MB) dyes from aqueous solutions using second order derivative spectrophotometric method (SODS) which was applied to resolve the overlap between the spectra of these dyes. The dependency of dyes removal efficiency in binary solutions was examined and optimized toward various parameters including initial dye concentration, pH of the solution, adsorbent dosage and ultrasonic contact time using central composite design (CCD) under response surface methodology (RSM) approach. The optimized experimental conditions were set as pH7.78, contact time 5min, initial MB concentration 22mgL(-1), initial MG concentration 12mgL(-1) and adsorbent dosage 0.0055g. The equilibrium data was fitted to isotherm models such as Langmuir, Freundlich and Tempkin and the results revealed the suitability of the Langmuir model. The maximum adsorption capacity of 666.67 and 153.85mgg(-1) was obtained for MB and MG removal respectively. Kinetics data fitting to pseudo-first order, pseudo-second order and Elovich models confirmed the applicability of pseudo-second order kinetic model for description of the mechanism and adsorption rate. Dye-loaded MIL-68(Al) can be easily regenerated using methanol and applied for three frequent sorption/desorption cycles with high performance. The impact of ionic strength on removal percentage of both dyes in binary mixture was studied by using NaCl and KCl soluble salts at different concentrations. According to our findings, only small dosage of the proposed MOF is considerably capable to remove large amounts of dyes at room temperature and in very short time that is a big advantage of MIL-68(Al) as a promising adsorbent for adsorptive removal processes.
84 citations
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TL;DR: RuO2 nanoparticles have been successfully synthesized by the hydrothermal method and the crystallite size and lattice strain in the samples have been investigated by Williamson-Hall (W-H) analysis assuming uniform deformation, deformation stress and deformation energy density, and the size-strain plot method.
Abstract: RuO2 nanoparticles (RuO2 NPs) have been successfully synthesized by the hydrothermal method. Structure and the particle size have been determined by X-ray diffraction (XRD), scanning electron microscopy (SEM), atomic force microscopy (AFM) and transmission electron microscopy (TEM). UV–Vis spectra reveal that the optical band gap of RuO2 nanoparticles is red shifted from 3.95 to 3.55 eV. BET measurements show a high specific surface area (SSA) of 118–133 m2/g and pore diameter (10–25 nm) has been estimated by Barret–Joyner–Halenda (BJH) method. The crystallite size and lattice strain in the samples have been investigated by Williamson–Hall (W–H) analysis assuming uniform deformation, deformation stress and deformation energy density, and the size–strain plot method. All other relevant physical parameters including stress, strain and energy density have been calculated. The average crystallite size and the lattice strain evaluated from XRD measurements are in good agreement with the results of TEM.
81 citations
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TL;DR: It was shown that a small amount of ZnO-NR-AC (with adsorption capacity of 20mgg(-1)) is sufficient for the rapid removal of high amount of MG dye in short time (3.99min).
Abstract: Maximum malachite green (MG) adsorption onto ZnO Nanorod-loaded activated carbon (ZnO-NR-AC) was achieved following the optimization of conditions, while the mass transfer was accelerated by ultrasonic. The central composite design (CCD) and genetic algorithm (GA) were used to estimate the effect of individual variables and their mutual interactions on the MG adsorption as response and to optimize the adsorption process. The ZnO-NR-AC surface morphology and its properties were identified via FESEM, XRD and FTIR. The adsorption equilibrium isotherm and kinetic models investigation revealed the well fit of the experimental data to Langmuir isotherm and pseudo-second-order kinetic model, respectively. It was shown that a small amount of ZnO-NR-AC (with adsorption capacity of 20 mg g− 1) is sufficient for the rapid removal of high amount of MG dye in short time (3.99 min).
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TL;DR: NIR spectroscopy in conjunction with chemometrics, is a very useful and rapid technique for the discrimination of jujube fruit.
Abstract: Near-infrared spectroscopy (NIRS) calibrations were developed for the discrimination of spectra of the jujube (Zizyphus jujuba Mill) fruit samples from four geographical regions Prediction models were developed for the quantitative prediction of the contents of jujube fruit, ie, total sugar, total acid, total phenolic content, and total antioxidant activity Four pattern recognition methods, principal component analysis (PCA), linear discriminant analysis (LDA), least squares-support vector machines (LS-SVM), and back propagation-artificial neural networks (BP-ANN), were used for the geographical origin classification Furthermore, three multivariate calibration models based on the standard normal variate (SNV) pretreated NIR spectroscopy, partial least squares (PLS), BP-ANN, and LS-SVM were constructed for quantitative analysis of the four analytes described above PCA provided a useful qualitative plot of the four types of NIR spectra from the fruit The LS-SVM model produced best quantitative prediction results Thus, NIR spectroscopy in conjunction with chemometrics, is a very useful and rapid technique for the discrimination of jujube fruit
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TL;DR: Using Fourier transform infrared-photoacoustic spectroscopy to analyse P species in biochar and to determine the effect of pyrolysis temperature on P speciation found the spectra turned out to be more informative in the regions with P vibrations for biochar produced at temperatures above 400°C.
Abstract: In the last decade, numerous studies have evaluated the benefits of biochar for improving soil quality. The purposes of the current study were to use Fourier transform infrared-photoacoustic spectroscopy (FTIR-PAS) to analyse P species in biochar and to determine the effect of pyrolysis temperature on P speciation. The photoacoustic detector has a range of advantages for the very dark biochar samples in comparison to more traditional reflectance or transmission FTIR detectors. The spectra turned out to be more informative in the regions with P vibrations for biochar produced at temperatures above 400°C, where most of the remaining organic compounds were aromatic and therefore not overlapping with the P vibrations. For biochars produced from the solid fraction of digestate from biogas production, an increase in the pyrolysis temperature led to the formation of a large variety of P species. Hydroxylapatite and tricalcium phosphate were the most dominant P species in the mid to high temperature range (600-900°C), while at 1050°C apatite, iron phosphates, variscite and calcium phosphates were identified. However, the changes in P speciation in biochars produced from bone meal at different temperatures were smaller than in the biochars from digestate. Hydroxylapatite and calcium phosphates were identified in biochar produced at all temperatures, while there was some indication of struvite formation.
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TL;DR: Detailed analysis of intrinsic defect structure of ZnO was given with respect to mean particle size and calculation of band gap energies revealed consistent results with the experimental observations.
Abstract: ZnO nanoparticles were synthesized by solid state and hydrolysis methods based on the conventional precipitation. In situ growth of ZnO nanoparticles were monitored by photoluminescence spectroscopy (PL). By the help of electron paramagnetic resonance (EPR) technique, detailed analysis of intrinsic defect structure of ZnO was given with respect to mean particle size. In nanoscale concentration of surface defects enormously increased and core defects reduced. In addition, blue-shift was observed in PL spectra at near-band-edge UV region due to e–h recombination. Calculation of band gap energies by the aid of Brus equation revealed consistent results with the experimental observations.
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TL;DR: Hydrophobic interaction and hydrogen bonding were the interactive forces in the binding process of CBZ to AAG while in case of TFB only hydrophobic interactions were found to be involved, overlap of the binding site for two studied drugs on the AAG molecule was revealed by docking results.
Abstract: In the current study we have investigated the interaction of newly approved kinase inhibitors namely Cabozantinib (CBZ) and Tofacitinib (TFB) with human Alpha-1 acid glycoprotein (AAG) under simulated physiological conditions using fluorescence quenching measurements, circular dichroism, dynamic light scattering and molecular docking methods. CBZ and TFB binds to AAG with significant affinity and the calculated binding constant for the drugs lie in the order of 10(4). With the increase in temperature the binding constant values decreased for both CBZ and TFB. The fluorescence resonance energy transfer (FRET) from AAG to CBZ and TFB suggested the fluorescence intensity of AAG was quenched by the two studied drugs via the formation of a non-fluorescent complex in the static manner. The molecular distance r value calculated from FRET is around 2 nm for both drugs, fluorescence spectroscopy data was employed for the study of thermodynamic parameters, standard Gibbs free energy change at 300 K was calculated as -5.234 kcal mol(-1) for CBZ-AAG interaction and -6.237 kcal mol(-1) for TFB-AAG interaction, standard enthalpy change and standard entropy change for CBZ-AAG interaction are -9.553 kcal mol(-1) and -14.618 cal mol(-1) K(-1) respectively while for AAG-TFB interaction, standard enthalpy and standard entropy change was calculated as 4.019 kcal mol(-1) and 7.206 cal mol(-1) K(-1) respectively. Protein binding of the two drugs caused the tertiary structure alterations. Dynamic light scattering measurements demonstrated the reduction in the hydrodynamic radii of the protein. Furthermore molecular docking results suggested the Hydrophobic interaction and hydrogen bonding were the interactive forces in the binding process of CBZ to AAG while in case of TFB only hydrophobic interactions were found to be involved, overlap of the binding site for two studied drugs on the AAG molecule was revealed by docking results.
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TL;DR: A statistically good agreement was found between the amounts of paracetamol determined using PLS and GA-PLS algorithms, and that obtained by UHPLC analysis, whereas for tramadol results were proven to be more reliable compared to those of PLS.
Abstract: The UV spectrophotometric methods for simultaneous quantitative determination of paracetamol and tramadol in paracetamol-tramadol tablets were developed. The spectrophotometric data obtained were processed by means of partial least squares (PLS) and genetic algorithm coupled with PLS (GA-PLS) methods in order to determine the content of active substances in the tablets. The results gained by chemometric processing of the spectroscopic data were statistically compared with those obtained by means of validated ultra-high performance liquid chromatographic (UHPLC) method. The accuracy and precision of data obtained by the developed chemometric models were verified by analysing the synthetic mixture of drugs, and by calculating recovery as well as relative standard error (RSE). A statistically good agreement was found between the amounts of paracetamol determined using PLS and GA-PLS algorithms, and that obtained by UHPLC analysis, whereas for tramadol GA-PLS results were proven to be more reliable compared to those of PLS. The simplest and the most accurate and precise models were constructed by using the PLS method for paracetamol (mean recovery 99.5%, RSE 0.89%) and the GA-PLS method for tramadol (mean recovery 99.4%, RSE 1.69%).
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TL;DR: Both spectroscopic techniques demonstrate that there are similar but less spectral changes of BSA for the trypsin attack than for α-chymotrypsin although the substrate/enzyme ratio is taken the same.
Abstract: Enzymatically-induced degradation of bovine serum albumin (BSA) by serine proteases (trypsin and α-chymotrypsin) in various concentrations was monitored by means of Fourier transform infrared (FT-IR) and ultraviolet circular dichroism (UV-CD) spectroscopy. In this study, the applicability of both spectroscopies to monitor the proteolysis process in real time has been proven, by tracking the spectral changes together with secondary structure analysis of BSA as proteolysis proceeds. On the basis of the FTIR spectra and the changes in the amide I band region, we suggest the progression of proteolysis process via conversion of α-helices (1654 cm(-1)) into unordered structures and an increase in the concentration of free carboxylates (absorption of 1593 and 1402 cm(-1)). For the first time, the correlation between the degree of hydrolysis and the concentration of carboxylic groups measured by FTIR spectroscopy was revealed as well. The far UV-CD spectra together with their secondary structure analysis suggest that the α-helical content decreases concomitant with an increase in the unordered structure. Both spectroscopic techniques also demonstrate that there are similar but less spectral changes of BSA for the trypsin attack than for α-chymotrypsin although the substrate/enzyme ratio is taken the same.
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TL;DR: A novel, green, simple and fast method was developed for spectrophotometric determination of Malachite green, Crystal violet, and Rhodamine B in water samples based on Micro-cloud Point extraction (MCPE) at room temperature, the first report on the application of MCPE on dyes.
Abstract: A novel, green, simple and fast method was developed for spectrophotometric determination of Malachite green, Crystal violet, and Rhodamine B in water samples based on Micro-cloud Point extraction (MCPE) at room temperature. This is the first report on the application of MCPE on dyes. In this method, to reach the cloud point at room temperature, the MCPE procedure was carried out in brine using Triton X-114 as a non-ionic surfactant. The factors influencing the extraction efficiency were investigated and optimized. Under the optimized condition, calibration curves were found to be linear in the concentration range of 0.06-0.60mg/L, 0.10-0.80mg/L, and 0.03-0.30mg/L with the enrichment factors of 29.26, 85.47 and 28.36, respectively for Malachite green, Crystal violet, and Rhodamine B. Limit of detections were between 2.2 and 5.1μg/L.
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TL;DR: Pulsed laser ablation in a liquid medium is a promising technique as compared to the other synthetic methods to synthesize different materials in nanoscale form and the particle size and distribution of materials can be adjusted.
Abstract: Pulsed laser ablation in a liquid medium is a promising technique as compared to the other synthetic methods to synthesize different materials in nanoscale form. The laser parameters (e.g., wavelength, pulse width, fluence, and repetition frequency) and liquid medium (e.g., aqueous/nonaqueous liquid or solution with surfactant) were tightly controlled during and after the ablation process. By optimizing these parameters, the particle size and distribution of materials can be adjusted. The UV-vis absorption spectra and weight changes of targets were used for the characterization and comparison of products.
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TL;DR: Different morphological ZnO nanostructures via microwave hydrothermal methods at low temperature within a short time are synthesized and achieved at maximum efficiencies of photovoltaic cells prepared with ZnNO plate in all dye systems.
Abstract: In this paper we have synthesized different morphological ZnO nanostructures via microwave hydrothermal methods at low temperature within a short time. We described different morphologies of ZnO at different Zn(NO3)2/KOH mole ratio. The ZnO nanostructures were characterized via X-ray diffraction (XRD), field emission scanning electron microscopy (FE-SEM) and UV–vis spectrophotometry. All ZnO structures have hexagonal wurtzite type structures. The FESEM images showed various morphologies of ZnO such as plate, rod and nanoparticles. Dye sensitized solar cells have been assembled by these different morphological structures photo electrode and tannic acid or Fe–tannic acid complex dye as sensitizer. We have achieved at maximum efficiencies of photovoltaic cells prepared with ZnO plate in all dye systems. The conversion efficiencies of dye sensitized solar cells are 0.37% and 1.00% with tannic acid and Fe–tannic acid complex dye, respectively.
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TL;DR: To detect potential specific or nonspecific interactions between o-NBA and BSA, ligand-binding studies are performed using fluorescence spectroscopy, saturation transfer difference (STD) NMR, molecular docking and semi-empirical calculations.
Abstract: Serum albumins present reversible pH dependent conformational transitions. A sudden laser induced pH-jump is a methodology that can provide new insights on localized protein (un)folding processes that occur within the nanosecond to microsecond time scale. To generate the fast pH jump needed to fast-trigger a protein conformational event, a photo-triggered acid generator as o-nitrobenzaldehyde (o-NBA) can be conveniently used. In order to detect potential specific or nonspecific interactions between o-NBA and BSA, we have performed ligand-binding studies using fluorescence spectroscopy, saturation transfer difference (STD) NMR, molecular docking and semi-empirical calculations. Fluorescence quenching indicates the formation of a non-fluorescent complex in the ground-state between the fluorophore and the quencher, but o-NBA does not bind much effectively to the protein (Ka ~ 4.34 × 103 M− 1) and thus can be considered a relatively weak binder. The corresponding thermodynamic parameters: ΔG°, ΔS° and ΔH° showed that the binding process is spontaneous and entropy driven. Results of 1H STD-NMR confirm that the photo-acid and BSA interact, and the relative intensities of the signals in the STD spectra show that all o-NBA protons are equally involved in the binding process, which should correspond to a nonspecific interaction. Molecular docking and semi-empirical calculations suggest that the o-NBA binds preferentially to the Trp-212-containing site of BSA (FA7), interacting via hydrogen bonds with Arg-217 and Tyr-149 residues.
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TL;DR: A novel highly selective chemosensor S1 for cyanide based on unsymmetrical azine derivative was successfully designed and synthesized, which showed both colorimetric and fluorescence turn-on responses for Cyanide ions in aqueous.
Abstract: A novel highly selective chemosensor S1 for cyanide based on unsymmetrical azine derivative was successfully designed and synthesized, which showed both colorimetric and fluorescence turn-on responses for cyanide ions in aqueous. This structurally simple chemosensor could detect CN(-) anion over other anions in aqueous solution DMSO/H2O (v/v=3:2) undergo deprotonation reaction. Results showed that the chemosensor S1 exhibited 50 fold enhancement in fluorescence at 530nm and showed an obvious change in color from colorless to yellow that could be detected by naked eye under the UV-lamp after the addition of CN(-) in aqueous solution. Moreover, the detection limit on fluorescence response of the sensor to CN(-) is down to 6.17×10(-8)M by titration method. Test strips based on S1 were obtain, which could be used as a convenient and efficient CN(-) test kit to detect CN(-) in aqueous solution.
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TL;DR: The raw data indicated that imidazole derivatives could spontaneously bind with HSA through hydrophobic interactions and hydrogen bonds which agreed well with the results from the molecular modeling study.
Abstract: Small molecular drugs that can combine with target proteins specifically, and then block relative signal pathway, finally obtain the purpose of treatment. For this reason, the synthesis of novel imidazole derivatives was described and this study explored the details of imidazole derivatives binding to human serum albumin (HSA). The data of steady-state and time-resolved fluorescence showed that the conjugation of imidazole derivatives with HSA yielded quenching by a static mechanism. Meanwhile, the number of binding sites, the binding constants, and the thermodynamic parameters were also measured; the raw data indicated that imidazole derivatives could spontaneously bind with HSA through hydrophobic interactions and hydrogen bonds which agreed well with the results from the molecular modeling study. Competitive binding experiments confirmed the location of binding. Furthermore, alteration of the secondary structure of HSA in the presence of the imidazole derivatives was tested.
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TL;DR: The photometric characterizations and corresponding calculations indicated the suitability of the phosphor for display devices, and divalent ions introduced radiative defect centers, which enhances the PL intensity significantly.
Abstract: This paper reports the enhancement in photoluminescence due to the alkaline ions (M 2+ ) co-doping in YVO 4 :Eu 3+ phosphors prepared by solid state reaction method. The as synthesized samples were found to have single phase tetragonal structure and the incorporation of dopant/codopant did not affect the crystal structure. The characteristic bands of Y O and V O were located at 450 cm −1 and 830 cm −1 , respectively. The microscopic images exhibited the irregular morphology of the synthesized phosphor consisting of μm sized particles. Upon UV excitations, all phosphors showed intense red–orange emissions corresponding to the 5 D 0 → 7 F J =1,2 :Eu 3+ transitions, and the emission intensity was further enhanced due to codoping. Divalent ions introduced radiative defect centers, which enhances the PL intensity significantly. The calculation of spectral parameters was done through Judd–Ofelt theory from emission spectra. The photometric characterizations and corresponding calculations indicated the suitability of the phosphor for display devices.
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TL;DR: The prepared IIP is considered to be promising and selective sorbent for solid-phase extraction and preconcentration of Ni(2+) ion from different water samples and can be used and regenerated for at least eight times without any significant decrease in binding affinities.
Abstract: Here, the researchers report on the synthesis of ion imprinted polymeric (IIP) nanoparticles using a thermal polymerization strategy, and their usage for the separation of Ni(2+) ion from water samples The prepared Ni-IIP was characterized by colorimetry, FT-IR spectroscopy, and scanning electron microscopy It was found that the particle size of the prepared particle to be 50-70 nm in diameter with the highly selective binding capability for Ni(2+) ion, with reasonable adsorption and desorption process After preconcentration, bound ions can be eluted with an aqueous solution of hydrochloric acid, after their complexation with dimethylglyoxime, these ions can be quantified by UV-Vis absorption spectrophotometry The effect of various parameters on the extraction efficiency including pH of sample solution, adsorption and leaching times, initial sample volume, concentration and volume of eluent were investigated In selectivity study, it was found that imprinting causes increased affinity of the prepared IIP toward Ni(2+) ion over other ions such as Na(+), K(+), Ag(+), Co(2+), Cu(2+), Cd(2+), Hg(2+), Pb(2+), Zn(2+), Mn(2+), Mg(2+), Cr(3+), and Fe(3+) The prepared IIP can be used and regenerated for at least eight times without any significant decrease in binding affinities The prepared IIP is considered to be promising and selective sorbent for solid-phase extraction and preconcentration of Ni(2+) ion from different water samples
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TL;DR: The graphite carbon nitride nanosheets have been successfully used for the detection of Ag(+) in real water samples and exhibits a good linearity over the concentration range 0.020-2.0μM with a detection limit of 27nM.
Abstract: The graphite carbon nitride (g-C3N4) nanosheets were synthesized and applied for the detection of Ag(+) ion in aqueous solutions. Transmission electron microscopy, Fourier infrared spectroscopy, x-ray diffraction, ultraviolet/visible and photoluminescence spectroscopy were used for characterization of g-C3N4 nanosheets. The fluorescence intensity of g-C3N4 nanosheets decreases with the increase in the concentration of Ag(+). The fluorescence probe can be applied for detection of Ag(+). The results show that it has high selectivity to Ag(+) and exhibits a good linearity over the concentration range 0.020-2.0μM with a detection limit of 27nM. Most cations do not have any interference on the detection of Ag(+). The quenching process is assessed and discussed. Finally, the g-C3N4 nanosheets have been successfully used for the detection of Ag(+) in real water samples. The recoveries of spiked water samples are >97%.
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TL;DR: High stable CdS quantum dots (QDs) with good optical properties were successfully synthesized in a facile in-situ method, using Na2S2O3 as precursor and thioglycolic acid (TGA) as a catalyst, as well as capping agent in aqueous media.
Abstract: Photocatalysis based on semiconductor quantum dots, which utilize the solar energy can be used for elimination of pollutants from aqueous media and applied for water purification. In this paper, high stable CdS quantum dots (QDs) with good optical properties were successfully synthesized in a facile in-situ method, using Na2S2O3 as precursor and thioglycolic acid (TGA) as a catalyst, as well as capping agent in aqueous media. The synthesis process was optimized with a 2 IV 7 – 3 fractional factorial design method. Then, we studied the degradation of some industrial dyes including: alizarin, acid violet, mordant red and thymol blue as a tool to check the photocatalytic activity of synthesized CdS QDs. Results specified that the synthesized CdS QDs are capable for degradation of organic dyes under visible light irradiation with good recycling stability during photocatalytic experiments. Structural and spectroscopic properties of the synthesized CdS QDs were studied by TEM, XRD and absorption and fluorescence spectroscopy techniques. The synthesized TGA-capped CdS QDs have sizes in the range of 2.65–2.93 nm with cubic crystalline structures.
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TL;DR: The photometric characteristics indicate the suitability of the inorganic powder phosphors for solid-state lighting and display applications and the enhancement of luminescence was found in the sodium chloride co-doped powder phosphor.
Abstract: Microstructures of Ca0.5Y(1-x)(WO4)2:xLn(3+) (Ln=Pr, Sm, Eu, Tb, Dy, Yb/Er) phosphors were prepared via the solid-state reaction method. X-ray diffraction, scanning electron microscopy and photoluminescence were used to characterize the prepared phosphor samples. The results reveal that the phosphor samples have single phase scheelite structures with tetragonal symmetry of I41/a. The down/up conversion photoluminescence of the Ca0.5Y(1-x)(WO4)2:xLn(3+) (Ln=Pr, Sm, Eu, Tb, Dy, Yb/Er) phosphors properties reveal characteristic visible emissions. The energy transfer process, fluorescence lifetime and color coordinates are discussed in detail. Furthermore, the phosphor Ca0.5Y(1-x)(WO4)2:xPr(3+) co-doped with alkali chlorides shows the enhancement of luminescence, which was found in the sodium chloride co-doped powder phosphor. The photometric characteristics indicate the suitability of the inorganic powder phosphors for solid-state lighting and display applications.
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TL;DR: The results indicate that glabridin reversibly inhibits tyrosinase in a noncompetitive manner through a multiphase kinetic process with the IC50 of 0.43μmol/L.
Abstract: Tyrosinase is an oxidase that is the rate-limiting enzyme for controlling the production of melanin in the human body. Overproduction of melanin could lead to a variety of skin disorders. Glabridin, an isoflavan, isolated from the root of Glycyrrhiza glabra Linn, has exhibited several pharmacological activities, including excellent inhibitory effects on tyrosinase. In this paper, the inhibitory kinetics of glabridin on tyrosinase and their binding mechanisms were determined using spectroscopic, zebrafish model and molecular docking techniques. The results indicate that glabridin reversibly inhibits tyrosinase in a noncompetitive manner through a multiphase kinetic process with the IC50 of 0.43μmol/L. It has been shown that glabridin had a strong ability to quench the intrinsic fluorescence of tyrosinase mainly through a static quenching procedure, suggesting a stable glabridin-tyrosinase complex may be generated. The results of molecular docking suggest that glabridin did not directly bind to the active site of tyrosinase. Moreover, according to the results of zebrafish model system, glabridin shows no effects on melanin synthesis in zebrafish but presents toxicity to zebrafish embryo. The possible inhibitory mechanisms, which will help to design and search for tyrosinase inhibitors especially for glabridin analogues, were proposed.
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TL;DR: This study helps to elucidate the molecular mechanism of the interaction between copper and lysozyme and provides reference for toxicological studies of copper.
Abstract: Although copper is essential to all living organisms, its potential toxicity to human health have aroused wide concerns. Previous studies have reported copper could alter physical properties of lysozyme. The direct binding of copper with lysozyme might induce the conformational and functional changes of lysozyme and then influence the body's resistance to bacterial attack. To better understand the potential toxicity and toxic mechanisms of copper, the interaction of copper with lysozyme was investigated by biophysical methods including multi-spectroscopic measurements, isothermal titration calorimetry (ITC), molecular docking study and enzyme activity assay. Multi-spectroscopic measurements proved that copper quenched the intrinsic fluorescence of lysozyme in a static process accompanied by complex formation and conformational changes. The ITC results indicated that the binding interaction was a spontaneous process with approximately three thermodynamical binding sites at 298K and the hydrophobic force is the predominant driven force. The enzyme activity was obviously inhibited by the addition of copper with catalytic residues Glu 35 and Asp 52 locating at the binding sites. This study helps to elucidate the molecular mechanism of the interaction between copper and lysozyme and provides reference for toxicological studies of copper.