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Journal ArticleDOI

A regional study of the zoonotic broad tapeworm Dibothriocephalus spp. in Northwestern Patagonia (Argentina): origin of fishes and coastal cities as factors affecting infection in fishes

14 Apr 2021-Parasitology Research (Springer Berlin Heidelberg)-Vol. 120, Iss: 7, pp 2415-2427
TL;DR: In this paper, the authors assess factors influencing the prevalence and abundance of plerocercoids in fishes that could increase the risk of transmission of Dibothriocephalus spp. in Andean Patagonian lakes.
Abstract: Diphyllobothriosis was first recorded in humans in Argentina in 1892 and in introduced salmonids in 1952. The aim of this work is to assess factors influencing the values of prevalence and abundance of plerocercoids in fishes that could increase the risk of transmission of Dibothriocephalus spp. in Andean Patagonian lakes. We analysed two key issues potentially related to the occurrence of tapeworms in fish: the presence of cities on coastlines (as potential sources of eggs to nearby lakes) and the difference between native and exotic fishes in susceptibility to infection. We investigated the probability of finding parasites in fish, the variation in parasite abundance in different environments and the relationship between host length and occurrence of plerocercoids. A total of 3226 fishes (belonging to six autochthonous and four introduced species) were analysed between 2010 and 2019 in eight environments. Plerocercoids were counted, and a subset was determined molecularly to species level. Two species, Dibothriocephalus latus and Dibothriocephalus dendriticus, were identified from both salmonids and native fishes, this being the first molecular confirmation of these tapeworm species parasitizing native South American fishes. Salmonids had higher levels of infection than native fishes, and these levels were higher in aquatic environments with a city on their coastline. Transmission to humans seems to occur mainly through Oncorhynchus mykiss, which showed the highest infection values and is the species most captured by fishers. Based on previous data and the present results, eggs shed by humans, dogs and gulls in cities could be the principal factors in maintaining the life cycle of this parasite in surrounding aquatic environments.
Citations
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TL;DR: The data on the mitochondrial genes, the allelic structure of microsatellite loci, and the principal coordinate analysis showed close genetic relationships between D. latus from Argentina and the Alpine lakes region, supporting the hypothesis of the European origin of the broad fish tapeworm from South America.

2 citations

Journal ArticleDOI
TL;DR: An annotated checklist of the cestode parasites of Argentinean wild birds is presented, as the result of a compilation of parasitological papers published between 1900 and April 2021.
Abstract: An annotated checklist of the cestode parasites of Argentinean wild birds is presented, as the result of a compilation of parasitological papers published between 1900 and April 2021. This review provides data on hosts, geographical distribution, sites of infection, location of material deposited in helminthological collections, references and taxonomic comments. A host/parasite list is also provided. During this period, 38 papers were published that gather information about 34 cestode nominal species and 11 taxa identified at generic level, belonging to three orders, ten families and 35 genera. The highest number of cestode taxa was recorded in the family Hymenolepididae, with 12 nominal species and two taxa identified at generic level, followed by Dilepididae, with eight nominal species and three taxa identified at generic level. Of the 1042 species of birds reported in Argentina, only 29 (2.8%) were reported as hosts of adult cestodes. The families of birds with the highest number of reported taxa were Laridae and Anatidae, with 20 and 14 taxa, respectively.

1 citations

Journal ArticleDOI
TL;DR: In this article , Dibothriocephalus latus and Dendriticus were identified for the first time, using morphological and molecular procedures, in a population of introduced Chinook salmon in Chile.
Abstract: In the present study, the zoonotic tapeworms Dibothriocephalus latus and Dibothriocephalus dendriticus were identified for the first time, using morphological and molecular procedures, in a population of introduced Chinook salmon in Chile. The morphological differences observed between plerocercoids of D. latus and D. dendriticus were, respectively, a retracted and obscured scolex versus one that is always visible and only partially retracted after cold fixation; extension of frontal glands; size, types of, density of, and distribution of microtriches; and number of parenchymal longitudinal muscle bundles within 50-µm spaces. With scanning electronic microscopy, both species presented 3 types of microtriches: coniform and uncinated spinitriches, and capilliform filitriches. In the body region, D. latus presents all types of microtriches, but D. dendriticus only possessed capilliform filitriches. Multiplex PCR targeting cox1 of Diphyllobothriidae and subsequent sequence analysis allowed for confirmation of species identity. All adult Chinook salmon examined (32–60 cm total length) were infected by Dibothriocephalus spp. with a range of 15–192 plerocercoids. Plerocercoids were found in the stomach, intestine, liver, spleen, gonads, swim bladder, peritoneum, heart, and muscles. The prevalence of infected salmon, the percentage of plerocercoids, and the mean intensity of D. latus in the muscles were 3, 4, and 2 times greater than that of D. dendriticus. Histological examination of the stomach, liver, spleen, gonads, and muscle revealed the presence of 1 or more encysted or free plerocercoids. In most cases, varying degrees of chronic inflammation and low presence of neutrophils were observed. The prey consumed by Chinook salmon included the native fish, Galaxias maculatus, and unidentified fish and amphipods. Other identified endohelminths were Derogenes lacustris Tsuchida, Flores, Viozzi, Rauque, and Urabe, 2021 in the stomach, Camallanus corderoi Torres, Teuber and Miranda, 1990 in the intestine, larvae of Contracaecum sp. in the intestinal wall, and Acanthocephalus tumescens (von Linstow, 1896) in the intestine. All identified parasites are reported for the first time in Chinook salmon from Chile.

1 citations

Journal ArticleDOI
TL;DR: The broad fish tapeworm, Dibothriocephalus latus (Diphyllobothriidea), is one of the most important causative agents of D. latus in Europe as mentioned in this paper .
Abstract: The broad fish tapeworm, Dibothriocephalus latus (Diphyllobothriidea), is the most important causative agent of diphyllobothriosis, a fish-borne zoonosis, in Europe. Part I of this review focused on the occurrence of D. latus in northwestern and central Europe, particularly in Fennoscandia, the Baltic, the Alpine lakes and Danube River regions during 1900–2020. Part II summarises data on D. latus from the European and Asian parts of Russia and from Asian countries. The tapeworm has occurred throughout Russia, with the most important foci in (i) the Republic of Karelia in the northwest of European Russia, (ii) the Volga River basin in the central and southern parts of European Russia, (iii) the Ob-Irtysh rivers region in the Ural region, (iv) the Yenisei-Lena rivers region in Siberia, and (v) the Lake Baikal basin in Siberia. The incidence of diphyllobothriosis has declined in recent decades, especially in European Russia, but zoonosis is still prevalent in some regions of Siberia. Cases reported from Arctic regions, the region around Lake Baikal, and the Pacific coast, including the Amur basin, however, were probably misidentifications with D. dendriticus and/or D. nihonkaiensis. No other Asian country where D. latus findings represented either imported cases or misidentifications had natural focus of diphyllobothriosis. Patterns of distribution of D. latus occurrence were similar in all Eurasian foci between 1900 and 2020. The numbers of records were associated with historical and epidemiological milestones of particular time periods.
Journal ArticleDOI
TL;DR: In this paper , the authors investigated the genetic characteristics of D. dendriticus from Chile by haplotype network analysis of mitochondrial cytochrome c oxidase subunit I gene (cox1) and cob gene (cob), as well as their origins.
References
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Journal ArticleDOI
TL;DR: In this article, a model is described in an lmer call by a formula, in this case including both fixed-and random-effects terms, and the formula and data together determine a numerical representation of the model from which the profiled deviance or the profeatured REML criterion can be evaluated as a function of some of model parameters.
Abstract: Maximum likelihood or restricted maximum likelihood (REML) estimates of the parameters in linear mixed-effects models can be determined using the lmer function in the lme4 package for R. As for most model-fitting functions in R, the model is described in an lmer call by a formula, in this case including both fixed- and random-effects terms. The formula and data together determine a numerical representation of the model from which the profiled deviance or the profiled REML criterion can be evaluated as a function of some of the model parameters. The appropriate criterion is optimized, using one of the constrained optimization functions in R, to provide the parameter estimates. We describe the structure of the model, the steps in evaluating the profiled deviance or REML criterion, and the structure of classes or types that represents such a model. Sufficient detail is included to allow specialization of these structures by users who wish to write functions to fit specialized linear mixed models, such as models incorporating pedigrees or smoothing splines, that are not easily expressible in the formula language used by lmer.

50,607 citations

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TL;DR: Suggestions for various terms used by parasitologists when describing the ecology of parasites are provided in an attempt to foster consistent use and to make terms used in parasite ecology easier to interpret for those who study free-living organisms.
Abstract: We consider 27 population and community terms used frequently by parasitologists when describing the ecology of parasites. We provide suggestions for various terms in an attempt to foster consistent use and to make terms used in parasite ecology easier to interpret for those who study free-living organisms. We suggest strongly that authors, whether they agree or disagree with us, provide complete and unambiguous definitions for all parameters of their studies.

6,400 citations

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TL;DR: The extraction of DNA from semen and very small bloodstains using Chelex 100 is as efficient or more efficient than using proteinase K and phenol-chloroform extraction and DNA extracted from bloodstain seems less prone to contain PCR inhibitors when prepared by this method.
Abstract: Procedures utilizing Chelex 100 chelating resin have been developed for extracting DNA from forensic-type samples for use with the PCR. The procedures are simple, rapid, involve no organic solvents and do not require multiple tube transfers for most types of samples. The extraction of DNA from semen and very small bloodstains using Chelex 100 is as efficient or more efficient than using proteinase K and phenol-chloroform extraction. DNA extracted from bloodstains seems less prone to contain PCR inhibitors when prepared by this method. The Chelex method has been used with amplification and typing at the HLA DQ alpha locus to obtain the DQ alpha genotypes of many different types of samples, including whole blood, bloodstains, seminal stains, buccal swabs, hair and post-coital samples. The results of a concordance study are presented in which the DQ alpha genotypes of 84 samples prepared using Chelex or using conventional phenol-chloroform extraction are compared. The genotypes obtained using the two different extraction methods were identical for all samples tested.

5,838 citations

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TL;DR: The glmmTMB package fits many types of GLMMs and extensions, including models with continuously distributed responses, but here the authors focus on count responses and its ability to estimate the Conway-Maxwell-Poisson distribution parameterized by the mean is unique.
Abstract: Count data can be analyzed using generalized linear mixed models when observations are correlated in ways that require random effects However, count data are often zero-inflated, containing more zeros than would be expected from the typical error distributions We present a new package, glmmTMB, and compare it to other R packages that fit zero-inflated mixed models The glmmTMB package fits many types of GLMMs and extensions, including models with continuously distributed responses, but here we focus on count responses glmmTMB is faster than glmmADMB, MCMCglmm, and brms, and more flexible than INLA and mgcv for zero-inflated modeling One unique feature of glmmTMB (among packages that fit zero-inflated mixed models) is its ability to estimate the Conway-Maxwell-Poisson distribution parameterized by the mean Overall, its most appealing features for new users may be the combination of speed, flexibility, and its interface’s similarity to lme4

4,497 citations