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Journal ArticleDOI

A vectorial image soft segmentation method based on neighborhood weighted Gaussian mixture model.

TL;DR: A segmentation tool is presented in order to differentiate the anatomical structures within the vectorial volume of the CT uroscan to get a better classification result and is less affected by the noise.
About: This article is published in Computerized Medical Imaging and Graphics.The article was published on 2009-12-01 and is currently open access. It has received 26 citations till now. The article focuses on the topics: Scale-space segmentation & Mixture model.

Summary (1 min read)

1. Introduction

  • The CT uroscan is the classical preoperative examintio for renal surgery.
  • It consists of three to four time-spaced 3D acquisitions at several contrast medium diffusion stages, which give complementary information about the kidney anatomy.
  • Getting the material probabilities by a soft segmentation method [2] instead of assigning a definite material to the voxels (especially the boundary voxels) will be more conformable to the reality.
  • In order to integrate spatial information to the Gaussian mixture model based vectorial data segmentation method, the authors proposed to involve a neighborhood weight within the classification process.

2. Gaussian mixture model

  • Each component density follows a Gaussian distribution.
  • Based on statistical theory, the parameters are estimated by maximum likelihood (ML) and expectation maximization (EM) algorithm is used as an optimization method.
  • Recall that the goal is to estimate the class probabilities on each voxel according to the intensity vectors.

3. Proposed neighborhood weighted method

  • The iteration formula described in section 2 didn’t involve any spatial information about current voxel.
  • The authors use Eq. (9) to just smooth the class decisions after classification with the classical Gaussian mixture model.
  • The results are shown in Fig. 3. Fig. 3(a) illustrates the intensity distribution summation along three axes of the original image.
  • Because of the inhomogeneity of the acquisitions and the partial volume effects, the result of the intensity-only method has some misclassification area, especially the renal cortex and the renal medulla because of their close intensity range, which is shown in Fig. 6(a).
  • While taking the neighborhood information into the iteration process, the results are improved significantly, as shown in Fig. 7(b).

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Citations
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Journal ArticleDOI
TL;DR: It is concluded that, in order to avoid artifacts and exclude the several sources of bias that may influence the analysis, an optimal method should comprise a careful preprocessing of the images, be based on multimodal, complementary data, take into account spatial information about the lesions and correct for false positives.
Abstract: White matter hyperintensities (WMH) are commonly seen in the brain of healthy elderly subjects and patients with several neurological and vascular disorders. A truly reliable and fully automated method for quantitative assessment of WMH on magnetic resonance imaging (MRI) has not yet been identified. In this paper, we review and compare the large number of automated approaches proposed for segmentation of WMH in the elderly and in patients with vascular risk factors. We conclude that, in order to avoid artifacts and exclude the several sources of bias that may influence the analysis, an optimal method should comprise a careful preprocessing of the images, be based on multimodal, complementary data, take into account spatial information about the lesions and correct for false positives. All these features should not exclude computational leanness and adaptability to available data.

140 citations


Cites methods from "A vectorial image soft segmentation..."

  • ...The traditional Expectation-Maximization algorithm was slightly modified by introducing a context-sensitive penalty term (Tang et al. 2009): this way, at each iteration of the algorithm, the probability that a voxel belongs to a certain class depends not only on the voxel’s intensity, but also on…...

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Journal ArticleDOI
TL;DR: This work proposes an automatic lesion segmentation method that uses only three-dimensional fluid-attenuation inversion recovery (FLAIR) images and uses a modified context-sensitive Gaussian mixture model to determine voxel class probabilities, followed by correction of FLAIR artifacts.

52 citations


Cites background or methods from "A vectorial image soft segmentation..."

  • ...We therefore apply a previously proposed [23] adaptation to the E-step....

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  • ...Context-sensitive expectation-maximization In [23], the authors introduced contextual information into the traditional GMM-EM method as follows....

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  • ...In reality, and intuitively, we can expect a certain voxel's value to be affected by those in its neighborhood [22,23]....

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  • ...Because the traditional GMM-EM method is based only on intensity information, we use a modified GMM-EM method, initially proposed in [23], that considers additional contextual information....

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Journal ArticleDOI
TL;DR: A novel image segmentation method that combines spectral clustering and Gaussian mixture models is presented in this paper and the experimental evaluation on the IRIS dataset and the real-world image segmentsation problem demonstrates the effectiveness of the proposed approach.

45 citations


Cites methods from "A vectorial image soft segmentation..."

  • ..., incorporating spatial information [8–10], are introduced to make FCM and EM robust against noise to some extent....

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Journal ArticleDOI
Semra Icer1
TL;DR: An accurate and automatic segmentation system that allows opportunity for quantitative comparison to doctors in the planning of treatment and the diagnosis of diseases affecting the size of the corpus callosum was developed and can be adapted to perform segmentation on other regions of the brain.

25 citations


Cites methods from "A vectorial image soft segmentation..."

  • ...[10] H....

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  • ...GMM parameters are estimated from training data using he iterative expectation-maximization (EM) [10]....

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Journal ArticleDOI
TL;DR: This paper proposes a new model, which incorporates the image content-based spatial information extracted from saliency map into the conventional GMM, and shows that the proposed method outperforms the state-of-the-art methods in terms of accuracy and computational time.
Abstract: Gaussian mixture model (GMM) is a flexible tool for image segmentation and image classification. However, one main limitation of GMM is that it does not consider spatial information. Some authors introduced global spatial information from neighbor pixels into GMM without taking the image content into account. The technique of saliency map, which is based on the human visual system, enhances the image regions with high perceptive information. In this paper, we propose a new model, which incorporates the image content-based spatial information extracted from saliency map into the conventional GMM. The proposed method has several advantages: It is easy to implement into the expectation–maximization algorithm for parameters estimation, and therefore, there is only little impact in computational cost. Experimental results performed on the public Berkeley database show that the proposed method outperforms the state-of-the-art methods in terms of accuracy and computational time.

14 citations


Cites background from "A vectorial image soft segmentation..."

  • ...GMM-MT has later been extended by applying either a weighted arithmetic or a weighted geometric mean template to the conditional and the prior probability, called ACAP, ACGP, GCGP and GCAP [22, 23]....

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  • ...Another approach incorporates local spatial information directly by using a mean template (GMM-MT) [21]....

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  • ...The spatial information can be introduced in GMM as a weighted template for computing the conditional probability of xi by its neighbor probabilities [21, 23]....

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  • ...This twostep approach allowed us to adapt the neighboring template of GMM-MT according to the image content....

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References
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Journal ArticleDOI
TL;DR: Wang et al. as discussed by the authors proposed a multi-resolution Gaussian mixture model method, which considers not only local but also global information of image, it overcomes the effect of noise and can obtain better segmentation result.

8 citations


"A vectorial image soft segmentation..." refers methods in this paper

  • ...[14] proposed to use a multi-resolution Gaussian mixture...

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Proceedings ArticleDOI
22 Oct 2007
TL;DR: A local MI maximization registration method, where the kidneys are extracted from the abdomen volumes and the registration between the extracted kidneys is implemented by maximizing the MI between them, is proposed.
Abstract: One of the goal of the Nephron-Sparing surgery properative planning is to delineate as exactly as possible the renal carcinoma and to specify its relations to the renal arterial, venous and collecting system anatomies. The classical preoperative imaging system is the spiral CT urography, which gives sucessive 3D acquisitions of complementary information The integration of this information within the a patient specific anatomical referential can be achieved by intra-patient registration techniques. A local MI maximization registration method is proposed in this paper. The kidneys are extracted from the abdomen volumes and then the registration between the extracted kidneys is implemented by maximizing the MI between them. The experimental results demonstrates that this method is effective.

8 citations


"A vectorial image soft segmentation..." refers methods in this paper

  • ...The first step in this integration process is to bring the different acquisitions into spatial alignment which has been done through a loc l mutual information maximization registration technique [1]....

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