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Application of support vector machines in viral biology

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TLDR
This chapter provides lucid and easy to understand details of SVM algorithms along with applications in virology, one such robust tool based rigorously on statistical learning theory.
Abstract
Novel experimental and sequencing techniques have led to an exponential explosion and spiraling of data in viral genomics. To analyse such data, rapidly gain information, and transform this information to knowledge, interdisciplinary approaches involving several different types of expertise are necessary. Machine learning has been in the forefront of providing models with increasing accuracy due to development of newer paradigms with strong fundamental bases. Support Vector Machines (SVM) is one such robust tool, based rigorously on statistical learning theory. SVM provides very high quality and robust solutions to classification and regression problems. Several studies in virology employ high performance tools including SVM for identification of potentially important gene and protein functions. This is mainly due to the highly beneficial aspects of SVM. In this chapter we briefly provide lucid and easy to understand details of SVM algorithms along with applications in virology.

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References
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TL;DR: The preliminary results indicate that LIBS coupled with chemometrics could provide a fast, efficient and low-cost approach for TMV-infected disease detection in tobacco leaves.
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TL;DR: The application of the Raman dynamic probe to the maturation of the icosahedral capsid of bacteriophage P22, a double-stranded DNA virus is described and a molecular model is proposed for assembly of the P22 procapsid.
Journal ArticleDOI

Detection of cucumber green mottle mosaic virus-infected watermelon seeds using a near-infrared (NIR) hyperspectral imaging system: Application to seeds of the “Sambok Honey” cultivar

TL;DR: A near-infrared (NIR) hyperspectral imaging system was used to discriminate virus-infected seeds from healthy seeds with partial least square discriminant analysis (PLS-DA) and least square support vector machine (LS-SVM).
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Trending Questions (1)
What are the potential applications of machine learning in virology?

Machine learning, specifically Support Vector Machines (SVM), is used in virology for tasks such as epitope prediction, virus-host interaction detection, and influenza host prediction.