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Applications of Deep Learning and Reinforcement Learning to Biological Data

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TLDR
This paper provides a comprehensive survey on the application of DL, RL, and deep RL techniques in mining biological data and compares the performances of DL techniques when applied to different data sets across various application domains.
Abstract
Rapid advances in hardware-based technologies during the past decades have opened up new possibilities for life scientists to gather multimodal data in various application domains, such as omics , bioimaging , medical imaging , and (brain/body)–machine interfaces . These have generated novel opportunities for development of dedicated data-intensive machine learning techniques. In particular, recent research in deep learning (DL), reinforcement learning (RL), and their combination (deep RL) promise to revolutionize the future of artificial intelligence. The growth in computational power accompanied by faster and increased data storage, and declining computing costs have already allowed scientists in various fields to apply these techniques on data sets that were previously intractable owing to their size and complexity. This paper provides a comprehensive survey on the application of DL, RL, and deep RL techniques in mining biological data. In addition, we compare the performances of DL techniques when applied to different data sets across various application domains. Finally, we outline open issues in this challenging research area and discuss future development perspectives.

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Artificial neural networks

Andrea Roli
TL;DR: Artificial neural networks (ANNs) constitute a class of flexible nonlinear models designed to mimic biological neural systems as mentioned in this paper, and they have been widely used in computer vision applications.
Journal ArticleDOI

State-of-the-art in artificial neural network applications: A survey

TL;DR: The study found that neural-network models such as feedforward and feedback propagation artificial neural networks are performing better in its application to human problems and proposed feedforwardand feedback propagation ANN models for research focus based on data analysis factors like accuracy, processing speed, latency, fault tolerance, volume, scalability, convergence, and performance.
Journal ArticleDOI

A State-of-the-Art Survey on Deep Learning Theory and Architectures

TL;DR: This survey presents a brief survey on the advances that have occurred in the area of Deep Learning (DL), starting with the Deep Neural Network and goes on to cover Convolutional Neural Network, Recurrent Neural Network (RNN), and Deep Reinforcement Learning (DRL).
Journal ArticleDOI

Application of deep learning for fast detection of COVID-19 in X-Rays using nCOVnet

TL;DR: A deep learning neural network-based method nCOVnet is proposed, an alternative fast screening method that can be used for detecting the COVID-19 by analyzing the X-rays of patients which will look for visual indicators found in the chest radiography imaging of CO VID-19 patients.
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Machine Learning in IoT Security: Current Solutions and Future Challenges

TL;DR: This paper systematically review the security requirements, attack vectors, and the current security solutions for the IoT networks, and sheds light on the gaps in these security solutions that call for ML and DL approaches.
References
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Proceedings Article

ImageNet Classification with Deep Convolutional Neural Networks

TL;DR: The state-of-the-art performance of CNNs was achieved by Deep Convolutional Neural Networks (DCNNs) as discussed by the authors, which consists of five convolutional layers, some of which are followed by max-pooling layers, and three fully-connected layers with a final 1000-way softmax.
Journal ArticleDOI

Long short-term memory

TL;DR: A novel, efficient, gradient based method called long short-term memory (LSTM) is introduced, which can learn to bridge minimal time lags in excess of 1000 discrete-time steps by enforcing constant error flow through constant error carousels within special units.
Proceedings Article

Very Deep Convolutional Networks for Large-Scale Image Recognition

TL;DR: This work investigates the effect of the convolutional network depth on its accuracy in the large-scale image recognition setting using an architecture with very small convolution filters, which shows that a significant improvement on the prior-art configurations can be achieved by pushing the depth to 16-19 weight layers.
Proceedings Article

Very Deep Convolutional Networks for Large-Scale Image Recognition

TL;DR: In this paper, the authors investigated the effect of the convolutional network depth on its accuracy in the large-scale image recognition setting and showed that a significant improvement on the prior-art configurations can be achieved by pushing the depth to 16-19 layers.
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