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Applied Multivariate Statistical Analysis

TL;DR: In this article, the authors present an overview of the basic concepts of multivariate analysis, including matrix algebra and random vectors, as well as a strategy for analyzing multivariate models.
Abstract: (NOTE: Each chapter begins with an Introduction, and concludes with Exercises and References.) I. GETTING STARTED. 1. Aspects of Multivariate Analysis. Applications of Multivariate Techniques. The Organization of Data. Data Displays and Pictorial Representations. Distance. Final Comments. 2. Matrix Algebra and Random Vectors. Some Basics of Matrix and Vector Algebra. Positive Definite Matrices. A Square-Root Matrix. Random Vectors and Matrices. Mean Vectors and Covariance Matrices. Matrix Inequalities and Maximization. Supplement 2A Vectors and Matrices: Basic Concepts. 3. Sample Geometry and Random Sampling. The Geometry of the Sample. Random Samples and the Expected Values of the Sample Mean and Covariance Matrix. Generalized Variance. Sample Mean, Covariance, and Correlation as Matrix Operations. Sample Values of Linear Combinations of Variables. 4. The Multivariate Normal Distribution. The Multivariate Normal Density and Its Properties. Sampling from a Multivariate Normal Distribution and Maximum Likelihood Estimation. The Sampling Distribution of 'X and S. Large-Sample Behavior of 'X and S. Assessing the Assumption of Normality. Detecting Outliners and Data Cleaning. Transformations to Near Normality. II. INFERENCES ABOUT MULTIVARIATE MEANS AND LINEAR MODELS. 5. Inferences About a Mean Vector. The Plausibility of ...m0 as a Value for a Normal Population Mean. Hotelling's T 2 and Likelihood Ratio Tests. Confidence Regions and Simultaneous Comparisons of Component Means. Large Sample Inferences about a Population Mean Vector. Multivariate Quality Control Charts. Inferences about Mean Vectors When Some Observations Are Missing. Difficulties Due To Time Dependence in Multivariate Observations. Supplement 5A Simultaneous Confidence Intervals and Ellipses as Shadows of the p-Dimensional Ellipsoids. 6. Comparisons of Several Multivariate Means. Paired Comparisons and a Repeated Measures Design. Comparing Mean Vectors from Two Populations. Comparison of Several Multivariate Population Means (One-Way MANOVA). Simultaneous Confidence Intervals for Treatment Effects. Two-Way Multivariate Analysis of Variance. Profile Analysis. Repealed Measures, Designs, and Growth Curves. Perspectives and a Strategy for Analyzing Multivariate Models. 7. Multivariate Linear Regression Models. The Classical Linear Regression Model. Least Squares Estimation. Inferences About the Regression Model. Inferences from the Estimated Regression Function. Model Checking and Other Aspects of Regression. Multivariate Multiple Regression. The Concept of Linear Regression. Comparing the Two Formulations of the Regression Model. Multiple Regression Models with Time Dependant Errors. Supplement 7A The Distribution of the Likelihood Ratio for the Multivariate Regression Model. III. ANALYSIS OF A COVARIANCE STRUCTURE. 8. Principal Components. Population Principal Components. Summarizing Sample Variation by Principal Components. Graphing the Principal Components. Large-Sample Inferences. Monitoring Quality with Principal Components. Supplement 8A The Geometry of the Sample Principal Component Approximation. 9. Factor Analysis and Inference for Structured Covariance Matrices. The Orthogonal Factor Model. Methods of Estimation. Factor Rotation. Factor Scores. Perspectives and a Strategy for Factor Analysis. Structural Equation Models. Supplement 9A Some Computational Details for Maximum Likelihood Estimation. 10. Canonical Correlation Analysis Canonical Variates and Canonical Correlations. Interpreting the Population Canonical Variables. The Sample Canonical Variates and Sample Canonical Correlations. Additional Sample Descriptive Measures. Large Sample Inferences. IV. CLASSIFICATION AND GROUPING TECHNIQUES. 11. Discrimination and Classification. Separation and Classification for Two Populations. Classifications with Two Multivariate Normal Populations. Evaluating Classification Functions. Fisher's Discriminant Function...nSeparation of Populations. Classification with Several Populations. Fisher's Method for Discriminating among Several Populations. Final Comments. 12. Clustering, Distance Methods and Ordination. Similarity Measures. Hierarchical Clustering Methods. Nonhierarchical Clustering Methods. Multidimensional Scaling. Correspondence Analysis. Biplots for Viewing Sample Units and Variables. Procustes Analysis: A Method for Comparing Configurations. Appendix. Standard Normal Probabilities. Student's t-Distribution Percentage Points. ...c2 Distribution Percentage Points. F-Distribution Percentage Points. F-Distribution Percentage Points (...a = .10). F-Distribution Percentage Points (...a = .05). F-Distribution Percentage Points (...a = .01). Data Index. Subject Index.
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Book
08 Sep 2000
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TL;DR: A description is given of Phaser-2.1: software for phasing macromolecular crystal structures by molecular replacement and single-wavelength anomalous dispersion phasing.
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17,755 citations

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TL;DR: Principal Component Analysis is a multivariate exploratory analysis method useful to separate systematic variation from noise and to define a space of reduced dimensions that preserve noise.

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TL;DR: In this paper, the authors describe the steps involved in VBM, with particular emphasis on segmenting gray matter from MR images with non-uniformity artifact and provide evaluations of the assumptions that underpin the method, including the accuracy of the segmentation and the assumptions made about the statistical distribution of the data.

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TL;DR: This paper presents a Bayesian method for constructing probabilistic networks from databases, focusing on constructing Bayesian belief networks, and extends the basic method to handle missing data and hidden variables.
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3,971 citations

References
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Journal ArticleDOI
TL;DR: In this paper, the normal probability plot correlation coefficient (NPC) was used as a test statistic for the composite hypothesis of normality, and the proposed test statistic is conceptnally simple, is compntationally convenient, and is readily extendible to testing non-normal distributional hypotheses.
Abstract: This paper introdLlces the normal probability plot correlation coefficient as a test statistic in complete samples for the composite hypothesis of normality. The proposed test statistic is conceptnally simple, is compntationally convenient, and is readily extendible to testing non-normal distributional hypotheses. An empirical power strldy shows that the normal probability plot correlation coefficient, compares favorably with 7 other normal test statistics. Percent points are tabulated for n = 3(l)50(5)100.

838 citations