Assessing the impact of non-native freshwater fishes on native species using relative weight
TL;DR: In this paper, the authors used relative weight (W r ), a condition index which allows evaluation of fish well-being, as a tool to investigate the impact of the presence of non-native species (NNS) on the condition of the key native species (NS) of the Tiber River basin (Italy): Barbus tyberinus Bonaparte, Leuciscus cephalus (Linnaeus), Leucisus lucumonis Bianco, Rutilus rubilio (Bonaparte) and Telestes muticellus (Bon
Abstract: The aim of the research was to test relative weight (W r ), a condition index which allows evaluation of fish well-being, as a tool to investigate the impact of the presence of non native species (NNS) on the condition of the key native species (NS) of the Tiber River basin (Italy): Barbus tyberinus Bonaparte, Leuciscus cephalus (Linnaeus), Leuciscus lucumonis Bianco, Rutilus rubilio (Bonaparte) and Telestes muticellus (Bonaparte). By means of Canonical Correlation Analysis, data from 130 sampling sites, distributed throughout Tiber River basin, were examined. W r of NS was related to densities of NNS and to environmental variables. Moreover, the correlation between W r of NS and density of NNS was investigated through linear regression analysis and covariance analysis. Preliminary results encourage the use of W r as a tool to assess the relationship between NS and ecological factors (such as the presence of NNS) and to explain the changes that occur along the longitudinal gradient of a river.
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TL;DR: Findings show that T-RFLP of 16S rRNA genes can be used to compare vaginal microbial communities and gain information about the numerically dominant populations that are present, and are largely invariant over time.
Abstract: To define and monitor the structure of microbial communities found in the human vagina, a cultivation-independent approach based on analyses of terminal restriction fragment length polymorphisms (T-RFLP) of 16S rRNA genes was developed and validated. Sixteen bacterial strains commonly found in the human vagina were used to construct model communities that were subsequently used to develop efficient means for the isolation of genomic DNA and an optimal strategy for T-RFLP analyses. The various genera in the model community could best be resolved by digesting amplicons made using bacterial primers 8f and 926r with HaeIII; fewer strains could be resolved using other primer-enzyme combinations, and no combination successfully distinguished certain species of the same genus. To demonstrate the utility of the approach, samples from five women that had been collected over a 2-month period were analyzed. Differences and similarities among the vaginal microbial communities of the women were readily apparent. The T-RFLP data suggest that the communities of three women were dominated by a single phylotype, most likely species of Lactobacillus. In contrast, the communities of two other women included numerically abundant populations that differed from Lactobacillus strains whose 16S rRNA genes had been previously determined. The T-RFLP profiles of samples from all the women were largely invariant over time, indicating that the kinds and abundances of the numerically dominant populations were relatively stable throughout two menstrual cycles. These findings show that T-RFLP of 16S rRNA genes can be used to compare vaginal microbial communities and gain information about the numerically dominant populations that are present.
57 citations
TL;DR: The results suggest that the invasion of Nile tilapia negatively affected the fishery economy and native fish species, and suitable control measurements should be taken.
42 citations
TL;DR: Wang et al. as mentioned in this paper pointed out that many of the biological traits that make tilapia popular for culture also contribute to its success as an invader, and proposed to use effectively the various fish species in aquaculture while controlling their spread in natural waters.
Abstract: Tilapia is one of the groups of fish species most widely cultured globally. China has been the largest producer of tilapia in the world since 1990s. Guangdong Province produces almost 40% of all tilapia in China because of its suitable geography and weather conditions, and tilapia culture has brought considerable economic benefits. Unfortunately, many of the biological traits that make tilapia popular for culture also contribute to its success as an invader. Tilapia has invaded natural waters and has become the dominant fish in many rivers of Guangdong Province, causing economic loss in capture fisheries, and affecting native fish species, biodiversity and aquatic ecosystems. Poor fishery management, water quality degradation and biodiversity loss have all facilitated the tilapia invasion. Tilapia have filled the niches left vacant by now locally extinct native species resulting from environmental changes in freshwater ecosystems of the province. The introduction of tilapia has both advantages and disadvantages, which should be managed to use effectively the various tilapia species in aquaculture while controlling their spread in natural waters.
21 citations
07 Aug 2017
TL;DR: In this paper, the effects of European barbel invasion in the Tiber River basin (Italy) on the native Tiber barbel Barbus tyberinus Bonaparte, 1839, verifying whether the co-occurrence played a negative impact on growth rate and relative weight.
Abstract: The purpose of this study was to investigate the effects of the European barbel Barbus barbus (L., 1758) invasion in the Tiber River basin (Italy) on the native Tiber barbel Barbus tyberinus Bonaparte, 1839, verifying whether the co-occurrence played a negative impact on growth rate and relative weight. Fish census data were collected during three periods (2000–2005, 2006–2010, 2011–2015) at 158 sampling sites. Since its first record in 1998, European barbel rapidly spread in the study area: it was present in more than 20% of the monitoring sites, where it is leading to the gradual replacement of Tiber barbel by widening its distribution in the Tiber River and in the downstream reaches of the main tributaries. By contrast, Tiber barbel has suffered from this competition, as demonstrated by the fact that the mean value of the relative weight was significantly higher where European barbel was absent. The results obtained suggested that this non-native species could be a serious threat to the conserv...
19 citations
TL;DR: Using mtDNA control regions (mtDNA CR) and morphological characteristics were used to identify invasive tilapia species as discussed by the authors, and the results showed that O. niloticus and T. zillii were the most abundant in the rivers of South China.
19 citations
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TL;DR: Given their current scale, biotic invasions have taken their place alongside human-driven atmospheric and oceanic alterations as major agents of global change and left unchecked, they will influence these other forces in profound but still unpredictable ways.
Abstract: Biotic invaders are species that establish a new range in which they proliferate, spread, and persist to the detriment of the environment. They are the most important ecological outcomes from the unprecedented alterations in the distribution of the earth's biota brought about largely through human transport and commerce. In a world without borders, few if any areas remain sheltered from these im- migrations. The fate of immigrants is decidedly mixed. Few survive the hazards of chronic and stochastic forces, and only a small fraction become naturalized. In turn, some naturalized species do become invasive. There are several potential reasons why some immigrant species prosper: some escape from the constraints of their native predators or parasites; others are aided by human-caused disturbance that disrupts native communities. Ironically, many biotic invasions are apparently facilitated by cultivation and husbandry, unintentional actions that foster immigrant populations until they are self-perpetuating and uncontrollable. Whatever the cause, biotic invaders can in many cases inflict enormous environmental damage: (1) Animal invaders can cause extinctions of vulnerable native species through predation, grazing, competition, and habitat alteration. (2) Plant invaders can completely alter the fire regime, nutrient cycling, hydrology, and energy budgets in a native ecosystem and can greatly diminish the abundance or survival of native species. (3) In agriculture, the principal pests of temperate crops are nonindigenous, and the combined expenses of pest control and crop losses constitute an onerous "tax" on food, fiber, and forage production. (4) The global cost of virulent plant and animal diseases caused by parasites transported to new ranges and presented with susceptible new hosts is currently incalculable. Identifying future invaders and taking effective steps to prevent their dispersal and establishment con- stitutes an enormous challenge to both conservation and international commerce. Detection and management when exclusion fails have proved daunting for varied reasons: (1) Efforts to identify general attributes of future invaders have often been inconclusive. (2) Predicting susceptible locales for future invasions seems even more problematic, given the enormous differences in the rates of arrival among potential invaders. (3) Eradication of an established invader is rare, and control efforts vary enormously in their efficacy. Successful control, however, depends more on commitment and continuing diligence than on the efficacy of specific tools themselves. (4) Control of biotic invasions is most effective when it employs a long-term, ecosystem- wide strategy rather than a tactical approach focused on battling individual invaders. (5) Prevention of invasions is much less costly than post-entry control. Revamping national and international quarantine laws by adopting a "guilty until proven innocent" approach would be a productive first step. Failure to address the issue of biotic invasions could effectively result in severe global consequences, including wholesale loss of agricultural, forestry, and fishery resources in some regions, disruption of the ecological processes that supply natural services on which human enterprise depends, and the creation of homogeneous, impoverished ecosystems composed of cosmopolitan species. Given their current scale, biotic invasions have taken their place alongside human-driven atmospheric and oceanic alterations as major agents of global change. Left unchecked, they will influence these other forces in profound but still unpredictable ways.
6,195 citations
TL;DR: In this article, a new multivariate analysis technique, called canonical correspondence analysis (CCA), was developed to relate community composition to known variation in the environment, where ordination axes are chosen in the light of known environmental variables by imposing the extra restriction that the axes be linear combinations of environmental variables.
Abstract: A new multivariate analysis technique, developed to relate community composition to known variation in the environment, is described. The technique is an extension of correspondence analysis (reciprocal averaging), a popular ordination technique that extracts continuous axes of variation from species occurrence or abundance data. Such ordination axes are typically interpreted with the help of external knowledge and data on environmental variables; this two—step approach (ordination followed by environmental gradient identification) is termed indirect gradient analysis. In the new technique, called canonical correspondence analysis, ordination axes are chosen in the light of known environmental variables by imposing the extra restriction that the axes be linear combinations of environmental variables. In this way community variation can be directly related to environmental variation. The environmental variables may be quantitative or nominal. As many axes can be extracted as there are environmental variables. The method of detrending can be incorporated in the technique to remove arch effects. (Detrended) canonical correspondence analysis is an efficient ordination technique when species have bell—shaped response curves or surfaces with respect to environmental gradients, and is therefore more appropriate for analyzing data on community composition and environmental variables than canonical correlation analysis. The new technique leads to an ordination diagram in which points represent species and sites, and vectors represent environmental variables. Such a diagram shows the patterns of variation in community composition that can be explained best by the environmental variables and also visualizes approximately the "centers" of the species distributions along each of the environmental variables. Such diagrams effectively summarized relationships between community and environment for data sets on hunting spiders, dyke vegetation, and algae along a pollution gradient.
5,689 citations
Book•
01 Jan 2004
2,526 citations
TL;DR: A review of the state of the art in the methods for standardizing catch and effort data can be found in this paper, which outlines the major estimation approaches being applied, how to identify and select appropriate explanatory variables, and how standardized catch rate can be used when conducting stock assessments.
1,154 citations
TL;DR: In this article, the authors presented a method for obtaining maximum likelihood estimates of population size from the results of a series of trappings in which the trapped animals are removed from the population.
Abstract: Moran (1951) presented a method for obtaining maximum likelihood estimates of population size from the results of a series of trappings in which the trapped animals are removed from the population. This type of trapping program may be appropriate when auxiliary studies of the trapped animals are to be made which necessitate their eventual sacrifice, or when economic or health reasons make it inadvisable to return trapped animals to the population.In such situations it is not possible to use the tagging and recapture method which has been discussed by numerous authors in recent years (see e.g. Leslie and Chitty (1951), Bailey (1951)). Moran's method, which will be called the removal method, is a special case of a more general procedure described by De Lury (1947). The present paper will cover the following topics: 1. Development of a rapid graphical procedure for obtaining maximum likelihood estimates of population size from removal method data. 2. Determination of the asymptotic precision of the removal method. 3. Report on the results of experimental sampling which was conducted in order to compare the maximum likelihood estimates with estimates by an alternative regression method (Hayne, 1949) and to study the performance of the removal method on small populations. 4. Determination of the proportion of the total population which must be trapped in order to reduce the coefficient of variation of estimates of population size to specified levels. 5. Tests of the assumptions underlying the removal method and their application to actual trapping data.
566 citations