Can spherical deconvolution provide more information than fiber orientations? Hindrance modulated orientational anisotropy, a true-tract specific index to characterize white matter diffusion.
Reads0
Chats0
TLDR
It is shown that the hindrance modulated orientational anisotropy (HMOA) index, defined as the absolute amplitude of each lobe of the fiber orientation distribution, can be used as a compact measure to characterize the diffusion properties along each fiber orientation in white matter regions with complex organization.Abstract:
Diffusion tensor imaging (DTI) methods are widely used to reconstruct white matter trajecto- ries and to quantify tissue changes using the average diffusion properties of each brain voxel. Spheri- cal deconvolution (SD) methods have been developed to overcome the limitations of the diffusion tensor model in resolving crossing fibers and to improve tractography reconstructions. However, the use of SD methods to obtain quantitative indices of white matter integrity has not been extensively explored. In this study, we show that the hindrance modulated orientational anisotropy (HMOA) index, defined as the absolute amplitude of each lobe of the fiber orientation distribution, can be used as a compact measure to characterize the diffusion properties along each fiber orientation in white matter regions with complex organization. We demonstrate that the HMOA is highly sensitive to changes in fiber diffusivity (e.g., myelination processes or axonal loss) and to differences in the micro- structural organization of white matter like axonal diameter and fiber dispersion. Using simulations to describe diffusivity changes observed in normal brain development and disorders, we observed that the HMOA is able to identify white matter changes that are not detectable with conventional DTI indi- ces. We also show that the HMOA index can be used as an effective threshold for in vivo data to improve tractography reconstructions and to better map white matter complexity inside the brain. In conclusion, the HMOA represents a true tract-specific and sensitive index and provides a compact characterization of white matter diffusion properties with potential for widespread application in nor- mal and clinical populations. Hum Brain Mapp 34:2464-2483, 2013. V C 2012 Wiley Periodicals, Inc.read more
Citations
More filters
Journal ArticleDOI
White matter integrity, fiber count, and other fallacies: The do's and don'ts of diffusion MRI
TL;DR: The physics of DW-MRI is reviewed, currently preferred methodology is indicated, and the limits of interpretation of its results are explained, with a list of 'Do's and Don'ts' which define good practice in this expanding area of imaging neuroscience.
Journal ArticleDOI
Multi-tissue constrained spherical deconvolution for improved analysis of multi-shell diffusion MRI data
TL;DR: The aim of this study is to incorporate support for multi-shell data into the CSD approach as well as to exploit the unique b-value dependencies of the different tissue types to estimate a multi-tissue ODF.
Journal ArticleDOI
The challenge of mapping the human connectome based on diffusion tractography
Klaus H. Maier-Hein,Peter F. Neher,Jean-Christophe Houde,Marc-Alexandre Côté,Eleftherios Garyfallidis,Jidan Zhong,Maxime Chamberland,Fang-Cheng Yeh,Ying-Chia Lin,Qing Ji,Wilburn E. Reddick,John O. Glass,David Qixiang Chen,Yuanjing Feng,Chengfeng Gao,Ye Wu,Jieyan Ma,H Renjie,Qiang Li,Carl-Fredrik Westin,Samuel Deslauriers-Gauthier,J. Omar Ocegueda Gonzalez,Michael Paquette,Samuel St-Jean,Gabriel Girard,François Rheault,Jasmeen Sidhu,Chantal M. W. Tax,Fenghua Guo,Hamed Y. Mesri,Szabolcs David,Martijn Froeling,Anneriet M. Heemskerk,Alexander Leemans,Arnaud Boré,Basile Pinsard,Christophe Bedetti,Matthieu Desrosiers,Simona M. Brambati,Julien Doyon,Alessia Sarica,Roberta Vasta,Antonio Cerasa,Aldo Quattrone,Jason D. Yeatman,Ali R. Khan,Wes Hodges,Simon Alexander,David Romascano,Muhamed Barakovic,Anna Auría,Oscar Esteban,Alia Lemkaddem,Jean-Philippe Thiran,Hasan Ertan Cetingul,Benjamin L. Odry,Boris Mailhe,Mariappan S. Nadar,Fabrizio Pizzagalli,Gautam Prasad,Julio E. Villalon-Reina,Justin Galvis,Paul M. Thompson,Francisco De Santiago Requejo,Pedro Luque Laguna,Luis Miguel Lacerda,Rachel Barrett,Flavio Dell'Acqua,Marco Catani,Laurent Petit,Emmanuel Caruyer,Alessandro Daducci,Tim B. Dyrby,Tim Holland-Letz,Claus C. Hilgetag,Bram Stieltjes,Maxime Descoteaux +76 more
TL;DR: The encouraging finding that most state-of-the-art algorithms produce tractograms containing 90% of the ground truth bundles (to at least some extent) is reported, however, the same tractograms contain many more invalid than valid bundles, and half of these invalid bundles occur systematically across research groups.
Journal ArticleDOI
A revised limbic system model for memory, emotion and behaviour
Marco Catani,Flavio Dell'Acqua,Flavio Dell'Acqua,Michel Thiebaut de Schotten,Michel Thiebaut de Schotten +4 more
TL;DR: This revised network model of the limbic system reconciles recent functional imaging findings with anatomical accounts of clinical disorders commonly associated with limbic pathology.
Journal ArticleDOI
Investigating white matter fibre density and morphology using fixel-based analysis.
David Raffelt,Jacques-Donald Tournier,Robert E. Smith,David N. Vaughan,Graeme D. Jackson,Gerard R. Ridgway,Alan Connelly +6 more
TL;DR: The FBM method is presented as an integral piece within a comprehensive fixel‐based analysis framework to investigate measures of fibre density, fibre‐bundle morphology (cross‐section), and a combined measure of fibredensity and cross‐section.
References
More filters
Journal ArticleDOI
Advances in functional and structural MR image analysis and implementation as FSL.
Stephen M. Smith,Mark Jenkinson,Mark W. Woolrich,Mark W. Woolrich,Christian F. Beckmann,Behrens Tej.,Heidi Johansen-Berg,Peter R. Bannister,M De Luca,Ivana Drobnjak,D E Flitney,Rami K. Niazy,J Saunders,J Vickers,Yongyue Zhang,N. De Stefano,J M Brady,Paul M. Matthews +17 more
TL;DR: A review of the research carried out by the Analysis Group at the Oxford Centre for Functional MRI of the Brain (FMRIB) on the development of new methodologies for the analysis of both structural and functional magnetic resonance imaging data.
Journal ArticleDOI
Tract-based spatial statistics: voxelwise analysis of multi-subject diffusion data.
Stephen M. Smith,Mark Jenkinson,Heidi Johansen-Berg,Daniel Rueckert,Thomas E. Nichols,Clare E. Mackay,Kate E. Watkins,Olga Ciccarelli,M Z Cader,Paul M. Matthews,Timothy E.J. Behrens +10 more
TL;DR: TBSS aims to improve the sensitivity, objectivity and interpretability of analysis of multi-subject diffusion imaging studies by solving the question of how to align FA images from multiple subjects in a way that allows for valid conclusions to be drawn from the subsequent voxelwise analysis.
Journal ArticleDOI
The basis of anisotropic water diffusion in the nervous system – a technical review
TL;DR: The purpose of this review is to characterize the relationship of nuclear magnetic resonance measurements of water diffusion and its anisotropy (i.e. directional dependence) with the underlying microstructure of neural fibres.
Journal ArticleDOI
Estimation of the Effective Self-Diffusion Tensor from the NMR Spin Echo
TL;DR: The diagonal and off-diagonal elements of the effective self-diffusion tensor, Deff, are related to the echo intensity in an NMR spin-echo experiment.
Journal ArticleDOI
Probabilistic diffusion tractography with multiple fibre orientations: What can we gain?
TL;DR: It is shown that multi-fibre tractography offers significant advantages in sensitivity when tracking non-dominant fibre populations, but does not dramatically change tractography results for the dominant pathways.