Clustal W and Clustal X version 2.0
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Cites methods from "Clustal W and Clustal X version 2.0..."
...We thank Nicolas Galtier for contributing code from the Phylo_win program....
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References
63,427 citations
"Clustal W and Clustal X version 2.0..." refers methods in this paper
...This will facilitate the further development of the alignment algorithms in the future and has allowed proper porting of the programs to the latest versions of Linux, Macintosh and Windows operating systems....
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...The source code and executables for Windows, Linux and Macintosh computers are available from the EBI ftp site ftp://ftp.ebi.ac.uk/pub/software/ clustalw2/ Contact: clustalw@ucd.ie...
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38,522 citations
"Clustal W and Clustal X version 2.0..." refers methods in this paper
...This will facilitate the further development of the alignment algorithms in the future and has allowed proper porting of the programs to the latest versions of Linux, Macintosh and Windows operating systems....
[...]
...The source code and executables for Windows, Linux and Macintosh computers are available from the EBI ftp site ftp://ftp.ebi.ac.uk/pub/software/ clustalw2/ Contact: clustalw@ucd.ie...
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...This has made the code complicated to maintain and develop, as the graphical interface must be constantly modified and recompiled for new operating systems and desktop environments (Windows, Macintosh, VMS, Unix and Linux)....
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...The Qt toolbox provides a native look and feel on Windows, Linux and Mac platforms....
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37,524 citations
"Clustal W and Clustal X version 2.0..." refers background or methods in this paper
...They are needed routinely as parts of more complicated analyses or analysis pipelines and there are several very widely used packages, e.g. Clustal W (Thompson et al., 1994), Clustal X (Thompson et al., 1997), T-Coffee (Notredame et al., 2000), MAFFT (Katoh et al., 2002) and MUSCLE (Edgar, 2004)....
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...Availability: The programs can be run on-line from the EBI web server: http://www.ebi.ac.uk/tools/clustalw2....
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...More recently, MAFFT and MUSCLE appeared; which were, initially, at least as accurate as Clustal, in terms of alignment accuracy, but which were also extremely fast; and able to align many thousands of sequences....
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12,003 citations
"Clustal W and Clustal X version 2.0..." refers background in this paper
...Availability: The programs can be run on-line from the EBI web server: http://www.ebi.ac.uk/tools/clustalw2....
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6,727 citations
"Clustal W and Clustal X version 2.0..." refers methods in this paper
...This will facilitate the further development of the alignment algorithms in the future and has allowed proper porting of the programs to the latest versions of Linux, Macintosh and Windows operating systems....
[...]